BLASTX nr result

ID: Lithospermum22_contig00000403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000403
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
emb|CBI40419.3| unnamed protein product [Vitis vinifera]              120   1e-25
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]   120   1e-25
ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like...   114   8e-24
ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like...   114   1e-23

>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  128 bits (321), Expect = 5e-28
 Identities = 68/145 (46%), Positives = 87/145 (60%), Gaps = 8/145 (5%)
 Frame = +3

Query: 69  ISNLGLGYXXXXXXXXXXXXXXXXXXXYICCRRNHHPHQPNNDENDN-------AIYLPR 227
           ++NLGLGY                   YICCR N H  + +N+ N+N        I LPR
Sbjct: 24  LTNLGLGYSIAIALFFLVLLSTILLASYICCRTNRHRSRNSNNNNNNYANSTADGIILPR 83

Query: 228 ILFVAEDDEENQNE-NSTPIGLNQSIINSYPRFIYSKKLGNSNTTNVNVIDQTNETTCPI 404
           I+FVAEDDEE + +  S  +GLNQ++INSYP+F +SK  G S  TN N  +     TC I
Sbjct: 84  IIFVAEDDEEQERDLESAAVGLNQAVINSYPKFQFSKDGGFSERTN-NFCN-----TCSI 137

Query: 405 CLCEYKESEMLRMLPDCKHCFHVTC 479
           CLCEYK+ EMLRM+PDC+H FH+ C
Sbjct: 138 CLCEYKDLEMLRMMPDCRHYFHLLC 162


>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  120 bits (300), Expect = 1e-25
 Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +3

Query: 69  ISNLGLGYXXXXXXXXXXXXXXXXXXXYICCRRN----HHPHQPNNDENDN-AIYLPRIL 233
           +SNLGLGY                   Y+CCRR     HH   P +  N +  I LPRI+
Sbjct: 85  LSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSDGIVLPRII 144

Query: 234 FVAEDDEENQNENSTPIGLNQSIINSYPRFIYSKKLGNSNTTNVNVIDQTNETTCPICLC 413
           FVAED++E+QN     +GL+Q++I+SYP+F +SK    SNT          ++ C ICLC
Sbjct: 145 FVAEDEDEDQN---VVVGLDQAVIDSYPKFPFSK----SNTHL--------DSVCSICLC 189

Query: 414 EYKESEMLRMLPDCKHCFHVTC 479
           EYK+SEMLRMLPDC+HCFH+ C
Sbjct: 190 EYKDSEMLRMLPDCRHCFHLYC 211


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score =  120 bits (300), Expect = 1e-25
 Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +3

Query: 69  ISNLGLGYXXXXXXXXXXXXXXXXXXXYICCRRN----HHPHQPNNDENDN-AIYLPRIL 233
           +SNLGLGY                   Y+CCRR     HH   P +  N +  I LPRI+
Sbjct: 28  LSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSDGIVLPRII 87

Query: 234 FVAEDDEENQNENSTPIGLNQSIINSYPRFIYSKKLGNSNTTNVNVIDQTNETTCPICLC 413
           FVAED++E+QN     +GL+Q++I+SYP+F +SK    SNT          ++ C ICLC
Sbjct: 88  FVAEDEDEDQN---VVVGLDQAVIDSYPKFPFSK----SNTHL--------DSVCSICLC 132

Query: 414 EYKESEMLRMLPDCKHCFHVTC 479
           EYK+SEMLRMLPDC+HCFH+ C
Sbjct: 133 EYKDSEMLRMLPDCRHCFHLYC 154


>ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 184

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
 Frame = +3

Query: 75  NLGLGYXXXXXXXXXXXXXXXXXXXYICCRRNHHP--HQPNNDENDNAIYLPRILFVAED 248
           +LGLGY                   Y+CCR N     H      +D  I LPR++FVAED
Sbjct: 15  HLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRLRHTTAAATSDGGIVLPRVIFVAED 74

Query: 249 DEENQNENSTPIGLNQSIINSYPRFIYSKKLGNSNTTNVNVIDQTNETTCPICLCEYKES 428
           ++E   + S  +G +QS+INSYPRF +++     N  N N+I+    TTC ICLCEYK+S
Sbjct: 75  EDE---DGSVAVGFDQSVINSYPRFQFNR----DNARNNNIIN----TTCSICLCEYKDS 123

Query: 429 EMLRMLPDCKHCFHVTC 479
           EMLRM+P+C+H FH+ C
Sbjct: 124 EMLRMMPECRHYFHLCC 140


>ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 179

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
 Frame = +3

Query: 75  NLGLGYXXXXXXXXXXXXXXXXXXXYICCRRNHHPHQPNNDE---NDNAIYLPRILFVAE 245
           +LGLGY                   Y+CCR N   H         +D  I LPR++FVAE
Sbjct: 8   HLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRHTQTTASAAASDGGIVLPRVIFVAE 67

Query: 246 DDEENQNENSTPIGLNQSIINSYPRFIYSKKLGNSNTTNVNVIDQTNETTCPICLCEYKE 425
           DD+E+ +     +GL+QS+INSYPRF ++K     N  N         TTC ICLCEYK+
Sbjct: 68  DDDEDADACMV-VGLDQSVINSYPRFQFNKDSDARNIIN---------TTCSICLCEYKD 117

Query: 426 SEMLRMLPDCKHCFHVTC 479
           SEMLRM+P+C+H FH+ C
Sbjct: 118 SEMLRMMPECRHYFHLCC 135


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