BLASTX nr result

ID: Lithospermum22_contig00000398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000398
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotia...   486   e-135
ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C...   477   e-132
ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C...   477   e-132
gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [V...   474   e-131
gb|ACU19827.1| unknown [Glycine max]                                  474   e-131

>gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotiana tabacum]
          Length = 285

 Score =  486 bits (1252), Expect = e-135
 Identities = 238/276 (86%), Positives = 250/276 (90%), Gaps = 1/276 (0%)
 Frame = +2

Query: 239  FLGTRLPDIHGGSSRVQARFGFGXXXXXXXXXXXXQQTTRPLWFPGAKSPEYLDGSLVGD 418
            F+GTRLP+IH G+ RVQARFGFG            Q   RPLW+PGAK+PEYLDGSLVGD
Sbjct: 10   FIGTRLPEIHSGAGRVQARFGFGKKAAPKKAPKR-QIPDRPLWYPGAKAPEYLDGSLVGD 68

Query: 419  YGFDPFGLGKPAEYLQYDFDSLDQNLAKNMAGDVIGTRTEVADVNPTPFQPYTEVFGLQR 598
            YGFDPFGLGKPAEYLQ+D DSLDQNLAKN+AGDVIGTRTE+ADV  TPFQPY+EVFGLQR
Sbjct: 69   YGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTELADVKSTPFQPYSEVFGLQR 128

Query: 599  FRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIE 778
            FRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIE
Sbjct: 129  FRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIE 188

Query: 779  VLVIGYI-EFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKEILQLAEIKHARLAMVAFL 955
            VLVIGYI EFQRNAELDPEKRLYPGGS+FDPLGLAADPEKK  LQLAEIKHARLAMVAFL
Sbjct: 189  VLVIGYIVEFQRNAELDPEKRLYPGGSFFDPLGLAADPEKKATLQLAEIKHARLAMVAFL 248

Query: 956  GFAVQAAATGKGPLNNWVTHLSDPLHTTILDTFGLF 1063
            GFAVQAAATGKGPLNNW THLSDPLHTTI DTFG F
Sbjct: 249  GFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGFF 284


>ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like
            [Glycine max]
          Length = 290

 Score =  477 bits (1228), Expect = e-132
 Identities = 231/275 (84%), Positives = 246/275 (89%), Gaps = 3/275 (1%)
 Frame = +2

Query: 239  FLGTRLPDIHGGSSRVQARFGFGXXXXXXXXXXXX---QQTTRPLWFPGAKSPEYLDGSL 409
            F+GTRL + H G+ RV ARFGFG               + T RPLW+PGAK+PEYLDGSL
Sbjct: 12   FMGTRLLEAHSGAGRVHARFGFGKKKAPAQKKASRGSGRDTDRPLWYPGAKAPEYLDGSL 71

Query: 410  VGDYGFDPFGLGKPAEYLQYDFDSLDQNLAKNMAGDVIGTRTEVADVNPTPFQPYTEVFG 589
            VGDYGFDPFGLGKPAEYLQ++ DSLDQNLAKN+AGD+IGTRTE+ADV  TPFQPY+EVFG
Sbjct: 72   VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQPYSEVFG 131

Query: 590  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLI 769
            LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLI
Sbjct: 132  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 191

Query: 770  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKEILQLAEIKHARLAMVA 949
            WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLA+DPEKK  LQLAEIKHARLAMV 
Sbjct: 192  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVG 251

Query: 950  FLGFAVQAAATGKGPLNNWVTHLSDPLHTTILDTF 1054
            FLGFAVQAAATGKGPLNNW THLSDPLHTTI+DTF
Sbjct: 252  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like
            [Glycine max]
          Length = 290

 Score =  477 bits (1228), Expect = e-132
 Identities = 231/275 (84%), Positives = 246/275 (89%), Gaps = 3/275 (1%)
 Frame = +2

Query: 239  FLGTRLPDIHGGSSRVQARFGFGXXXXXXXXXXXX---QQTTRPLWFPGAKSPEYLDGSL 409
            F+GTRL + H G+ RVQARFGFG                 + RPLW+PGAK+PEYLDGSL
Sbjct: 12   FMGTRLLEAHSGAGRVQARFGFGKKKAAAPKKVSRGSGSSSDRPLWYPGAKAPEYLDGSL 71

Query: 410  VGDYGFDPFGLGKPAEYLQYDFDSLDQNLAKNMAGDVIGTRTEVADVNPTPFQPYTEVFG 589
            VGDYGFDPFGLGKPAEYLQ++ DSLDQNLAKN+AGD+IGTRTE+ADV  TPFQPY+EVFG
Sbjct: 72   VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQPYSEVFG 131

Query: 590  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLI 769
            LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLI
Sbjct: 132  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 191

Query: 770  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKEILQLAEIKHARLAMVA 949
            WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLA+DPEKK  LQLAEIKHARLAMV 
Sbjct: 192  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVG 251

Query: 950  FLGFAVQAAATGKGPLNNWVTHLSDPLHTTILDTF 1054
            FLGFAVQAAATGKGPLNNW THLSDPLHTTI+DTF
Sbjct: 252  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
          Length = 290

 Score =  474 bits (1221), Expect = e-131
 Identities = 231/273 (84%), Positives = 245/273 (89%), Gaps = 1/273 (0%)
 Frame = +2

Query: 239  FLGTRLPDIHGGSSRVQARFGFGXXXXXXXXXXXXQQTT-RPLWFPGAKSPEYLDGSLVG 415
            F+GTRL D H GS R+QARFGFG              +T RPLW+PGAK+PE+LDGSLVG
Sbjct: 14   FMGTRLLDAHSGSGRIQARFGFGSKKKAAPKKVSKGPSTDRPLWYPGAKAPEWLDGSLVG 73

Query: 416  DYGFDPFGLGKPAEYLQYDFDSLDQNLAKNMAGDVIGTRTEVADVNPTPFQPYTEVFGLQ 595
            DYGFDPFGLGKPAEYLQ++ DSLDQNLAKN AG +IGTRTEVADV  TPFQPY+EVFGLQ
Sbjct: 74   DYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGIIIGTRTEVADVKSTPFQPYSEVFGLQ 133

Query: 596  RFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWI 775
            RFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWI
Sbjct: 134  RFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWI 193

Query: 776  EVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKEILQLAEIKHARLAMVAFL 955
            EVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLA+DPEKK  LQLAEIKHARLAMV FL
Sbjct: 194  EVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFL 253

Query: 956  GFAVQAAATGKGPLNNWVTHLSDPLHTTILDTF 1054
            GFAVQAAATGKGPLNNW THLSDPLHTTI+DTF
Sbjct: 254  GFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>gb|ACU19827.1| unknown [Glycine max]
          Length = 290

 Score =  474 bits (1221), Expect = e-131
 Identities = 229/275 (83%), Positives = 244/275 (88%), Gaps = 3/275 (1%)
 Frame = +2

Query: 239  FLGTRLPDIHGGSSRVQARFGFGXXXXXXXXXXXX---QQTTRPLWFPGAKSPEYLDGSL 409
            F+GTRL + H G+ RV ARFGFG               + T RPLW+PGAK+PEYLDGSL
Sbjct: 12   FMGTRLLEAHSGAGRVHARFGFGKKKAPAQKKASRGSGRDTVRPLWYPGAKAPEYLDGSL 71

Query: 410  VGDYGFDPFGLGKPAEYLQYDFDSLDQNLAKNMAGDVIGTRTEVADVNPTPFQPYTEVFG 589
            VGDYGFDPFGLGKPAEYLQ++ DSLDQNLAKN+AGD+IGTRTE+ADV  TPFQPY+EVFG
Sbjct: 72   VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQPYSEVFG 131

Query: 590  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLI 769
            LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLI
Sbjct: 132  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 191

Query: 770  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKEILQLAEIKHARLAMVA 949
            WIE LVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLA+DPEKK  LQLAEIKHARLAMV 
Sbjct: 192  WIEALVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVG 251

Query: 950  FLGFAVQAAATGKGPLNNWVTHLSDPLHTTILDTF 1054
            FLGFAVQAA TGKGPLNNW THLSDPLHTTI+DTF
Sbjct: 252  FLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTF 286


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