BLASTX nr result

ID: Lithospermum22_contig00000297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000297
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894226.1| predicted protein [Arabidopsis lyrata subsp....   278   1e-72
emb|CBI25132.3| unnamed protein product [Vitis vinifera]              277   1e-72
ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methy...   277   1e-72
ref|XP_002522119.1| conserved hypothetical protein [Ricinus comm...   276   4e-72
ref|NP_175422.2| ribosomal RNA small subunit methyltransferase E...   274   1e-71

>ref|XP_002894226.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340068|gb|EFH70485.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score =  278 bits (710), Expect = 1e-72
 Identities = 131/204 (64%), Positives = 169/204 (82%)
 Frame = +2

Query: 2   IELFNGKGGLIEACIQKIDRIGVHLMALEKPRTMLPWGIQWHVYAAFGSLKGGRADWLLE 181
           +ELFNGKGGL+E CIQ ID+ GV  +A E  + +LP GIQW V+AAFG+LKGGRADWL+E
Sbjct: 90  VELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVILPQGIQWQVFAAFGTLKGGRADWLVE 149

Query: 182 KCTELGASSVTPLLTKHSNSISDNRIDRLERVILAAEKQCQRLHGMTLRPPISINDLLPA 361
           KCTELGASSVTPLLT+ S+ IS+NR+DRLERV  AA KQCQRLH M L PPI  + LL  
Sbjct: 150 KCTELGASSVTPLLTERSSIISENRVDRLERVSFAAAKQCQRLHQMVLNPPIKFDTLLGH 209

Query: 362 VAQSEVCFLAAAEAIPIFKAISSLTVKSSGLLIVGPEGDLTRKESDMIVEAGAVSVGLGA 541
           +++S++C +A AEA P+  A++S T ++SG+LIVGPEGD T+KE +M++EAG+ +VGLG 
Sbjct: 210 ISKSKLCLVATAEATPLLNAVNSSTKETSGILIVGPEGDFTKKEVEMMLEAGSTAVGLGP 269

Query: 542 HRLRVETATVALLSTVMLWSDSQD 613
           HRLRVETAT+ALL+T+++WSDSQ+
Sbjct: 270 HRLRVETATIALLATLVMWSDSQE 293


>emb|CBI25132.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  277 bits (709), Expect = 1e-72
 Identities = 133/203 (65%), Positives = 167/203 (82%)
 Frame = +2

Query: 2   IELFNGKGGLIEACIQKIDRIGVHLMALEKPRTMLPWGIQWHVYAAFGSLKGGRADWLLE 181
           +ELFNGKGGL+E  I +IDR G+  +ALE P+ +LP   +WHV+AAFG+LKGGRADWL+E
Sbjct: 203 VELFNGKGGLVEGSINRIDRTGLDFIALEDPKLVLPQSSRWHVFAAFGTLKGGRADWLVE 262

Query: 182 KCTELGASSVTPLLTKHSNSISDNRIDRLERVILAAEKQCQRLHGMTLRPPISINDLLPA 361
           KCTELG SSVTPLLT+ S SIS+NR+DRL+RVILAA KQCQRLH MTL PP +I+ LLP 
Sbjct: 263 KCTELGTSSVTPLLTERSPSISENRVDRLQRVILAAAKQCQRLHEMTLNPPTTIDSLLPI 322

Query: 362 VAQSEVCFLAAAEAIPIFKAISSLTVKSSGLLIVGPEGDLTRKESDMIVEAGAVSVGLGA 541
           V QS++  +A AEA P+F  ++S   +S+GL+I+GPEGD T KE +M+ EAGA +VGLG 
Sbjct: 323 VTQSKLSLVAVAEATPVFSVLTSSRRESTGLMIIGPEGDFTEKELNMMREAGATAVGLGP 382

Query: 542 HRLRVETATVALLSTVMLWSDSQ 610
           HRLRVETAT+ALL+T+MLWSDS+
Sbjct: 383 HRLRVETATIALLATLMLWSDSE 405


>ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Vitis vinifera]
          Length = 287

 Score =  277 bits (709), Expect = 1e-72
 Identities = 133/203 (65%), Positives = 167/203 (82%)
 Frame = +2

Query: 2   IELFNGKGGLIEACIQKIDRIGVHLMALEKPRTMLPWGIQWHVYAAFGSLKGGRADWLLE 181
           +ELFNGKGGL+E  I +IDR G+  +ALE P+ +LP   +WHV+AAFG+LKGGRADWL+E
Sbjct: 80  VELFNGKGGLVEGSINRIDRTGLDFIALEDPKLVLPQSSRWHVFAAFGTLKGGRADWLVE 139

Query: 182 KCTELGASSVTPLLTKHSNSISDNRIDRLERVILAAEKQCQRLHGMTLRPPISINDLLPA 361
           KCTELG SSVTPLLT+ S SIS+NR+DRL+RVILAA KQCQRLH MTL PP +I+ LLP 
Sbjct: 140 KCTELGTSSVTPLLTERSPSISENRVDRLQRVILAAAKQCQRLHEMTLNPPTTIDSLLPI 199

Query: 362 VAQSEVCFLAAAEAIPIFKAISSLTVKSSGLLIVGPEGDLTRKESDMIVEAGAVSVGLGA 541
           V QS++  +A AEA P+F  ++S   +S+GL+I+GPEGD T KE +M+ EAGA +VGLG 
Sbjct: 200 VTQSKLSLVAVAEATPVFSVLTSSRRESTGLMIIGPEGDFTEKELNMMREAGATAVGLGP 259

Query: 542 HRLRVETATVALLSTVMLWSDSQ 610
           HRLRVETAT+ALL+T+MLWSDS+
Sbjct: 260 HRLRVETATIALLATLMLWSDSE 282


>ref|XP_002522119.1| conserved hypothetical protein [Ricinus communis]
           gi|223538718|gb|EEF40319.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score =  276 bits (705), Expect = 4e-72
 Identities = 134/203 (66%), Positives = 165/203 (81%)
 Frame = +2

Query: 2   IELFNGKGGLIEACIQKIDRIGVHLMALEKPRTMLPWGIQWHVYAAFGSLKGGRADWLLE 181
           IELFNGKG L+E CI++IDR G+  +A+  P+ +LP  I+WHV+AAFGSLKGGRADWL+E
Sbjct: 83  IELFNGKGALVEGCIERIDRTGLDFVAVNDPKIVLPQTIKWHVFAAFGSLKGGRADWLVE 142

Query: 182 KCTELGASSVTPLLTKHSNSISDNRIDRLERVILAAEKQCQRLHGMTLRPPISINDLLPA 361
           KCTELGA SVTPLLT+ S SISDNR+DRLERVILAA KQCQRLH M L PP  +  LLP 
Sbjct: 143 KCTELGAHSVTPLLTERSPSISDNRVDRLERVILAATKQCQRLHEMVLNPPTKVEGLLPL 202

Query: 362 VAQSEVCFLAAAEAIPIFKAISSLTVKSSGLLIVGPEGDLTRKESDMIVEAGAVSVGLGA 541
           +A S++ FLAAAEA P+   ++S   +SSGL+IVGPEGD T +E+ +++EAGA +VGLG 
Sbjct: 203 IADSKLSFLAAAEATPVVNVLASSRKESSGLIIVGPEGDFTEREAALMMEAGATAVGLGP 262

Query: 542 HRLRVETATVALLSTVMLWSDSQ 610
            RLRVETAT+ALL T+MLWSD+Q
Sbjct: 263 LRLRVETATMALLGTLMLWSDAQ 285


>ref|NP_175422.2| ribosomal RNA small subunit methyltransferase E [Arabidopsis
           thaliana] gi|49660069|gb|AAT68325.1| hypothetical
           protein At1g50000 [Arabidopsis thaliana]
           gi|55740521|gb|AAV63853.1| hypothetical protein
           At1g50000 [Arabidopsis thaliana]
           gi|332194384|gb|AEE32505.1| ribosomal RNA small subunit
           methyltransferase E [Arabidopsis thaliana]
          Length = 296

 Score =  274 bits (701), Expect = 1e-71
 Identities = 131/205 (63%), Positives = 165/205 (80%)
 Frame = +2

Query: 2   IELFNGKGGLIEACIQKIDRIGVHLMALEKPRTMLPWGIQWHVYAAFGSLKGGRADWLLE 181
           +ELFNGKGGL+E CIQ ID+ GV  +A E  + +LP G+QW V+AAFG+LKGGRADWL+E
Sbjct: 91  VELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVILPQGMQWQVFAAFGTLKGGRADWLIE 150

Query: 182 KCTELGASSVTPLLTKHSNSISDNRIDRLERVILAAEKQCQRLHGMTLRPPISINDLLPA 361
           KCTELGASSVTPLLT+ S  IS+NR+DRLERV  AA KQCQRLH M L PPI    LL  
Sbjct: 151 KCTELGASSVTPLLTERSPIISENRVDRLERVSFAAAKQCQRLHQMVLNPPIKFGTLLDH 210

Query: 362 VAQSEVCFLAAAEAIPIFKAISSLTVKSSGLLIVGPEGDLTRKESDMIVEAGAVSVGLGA 541
           + +S++C +A AEA P+  A++S   +SSGLLIVGPEGD T+KE +M++EAG  +VGLG 
Sbjct: 211 ILKSKLCLVATAEAKPLLNAVNSSAKESSGLLIVGPEGDFTKKEVEMMLEAGGTAVGLGP 270

Query: 542 HRLRVETATVALLSTVMLWSDSQDV 616
           HRLRVETAT+ALL+T+++WSDSQ++
Sbjct: 271 HRLRVETATIALLATLVMWSDSQEM 295


Top