BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000153
         (2889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   394   e-107
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   388   e-105
gb|AAO22642.1| unknown protein [Arabidopsis thaliana]                 384   e-103
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su...   384   e-103
ref|NP_001184889.1| CCR4-NOT transcription complex subunit 1 [Ar...   384   e-103

>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  394 bits (1013), Expect = e-107
 Identities = 236/536 (44%), Positives = 315/536 (58%), Gaps = 60/536 (11%)
 Frame = +1

Query: 1177 NKLGLDLSKVKPTCILKNRTMQVVDNPDFPDKKLGVVQRLESVYMDWCNRCER--VEDGE 1350
            +K  L   K  P   + NR    +   + P    G   ++  ++ +W   CE     +  
Sbjct: 1861 DKARLARDKKAPVPSITNREDSSILESEDP---AGFRDQVSILFAEWYRICELPGANEAA 1917

Query: 1351 YTNVYMEWSQSIPDILGGDDTICSFLR--------HIMKTRV----------------SF 1458
            + +  ++  Q+   +L GDD    F R        H + + V                SF
Sbjct: 1918 FNHFILQLHQN--GLLKGDDMTDRFFRLLTEISVAHCLSSEVINSGALQSSPQQIQNLSF 1975

Query: 1459 VSIGHYAKLCFCILEFYGSWKXXXXXXXXXXTAACIKVDSKHGK---SVHLYVGLFENWL 1629
            ++I  YAKL F IL+  GS K          T   I+ D++  K   +   Y  LF NWL
Sbjct: 1976 LAIDIYAKLVFSILK--GSGKTALLSRILAVTVRFIQKDAEEKKGSFNPRPYFRLFINWL 2033

Query: 1630 HDLCSLS---DVSNFAVLTAFSDTFYCLRPSEVPEFWFSWLELVSHTDFMPKLLCENDQK 1800
             DL SL    D +NF +LTAF++ F+ L P ++P F ++WLELVSH  FMPK+L  N QK
Sbjct: 2034 PDLGSLEPIVDGANFQILTAFANAFHALHPLKIPAFSYAWLELVSHRSFMPKMLTGNSQK 2093

Query: 1801 GWIYFQRLLVDLFQFMESLMRNSELEGLVQLLHQNSVKVLLVIVQIVPEFLCDYYFSFCD 1980
            GW Y QRLLVD+FQFME  +RN+EL   V  L++ +++VLLV++   PEFLCDY+F+FCD
Sbjct: 2094 GWPYIQRLLVDMFQFMEPFLRNAELGPPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCD 2153

Query: 1981 VIPPKCIEMRNIVLSASPRNM-----------------LNTYPRILSEFDGALKAYDMEN 2109
            VIPP CI+MRNI+LSA PRNM                 +N  PRILSE DGALK   M+ 
Sbjct: 2154 VIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEINQSPRILSEVDGALKLKQMKA 2213

Query: 2110 VLNGYIKTRQQRPAILDELRQKILFSPNESSRAGTRYNAPLINSLVLYLGIQAV------ 2271
             ++ Y+KTRQQ  + L +L+QK+L  P+E++ AGTRYN PLINSLVLY+G+QA+      
Sbjct: 2214 DVDEYLKTRQQGSSFLADLKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQAR 2273

Query: 2272 -THAQLMPSGRPPDRFFV----DIFKTFVLEVDKEGRIQFLNAMANHLRYPNSHTHYFST 2436
              HAQ   +      F V    DIF+T ++E+D EGR  FLNA+AN LRYPN+HTHYFS 
Sbjct: 2274 SPHAQSSANTVTLAVFLVGAALDIFQTLIVELDTEGRYLFLNAVANQLRYPNTHTHYFSF 2333

Query: 2437 ILLLLFLESHQEEIKEQITRVLLERLLANDPPPWGISLTFSELTQDPRYYFWSWPF 2604
            +LL LF ES QE I+EQITRVLLERL+ N P PWG+ +TF EL ++PRY FW+  F
Sbjct: 2334 VLLYLFAESTQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSF 2389



 Score =  158 bits (399), Expect = 9e-36
 Identities = 97/270 (35%), Positives = 144/270 (53%), Gaps = 41/270 (15%)
 Frame = +1

Query: 604  QEPPEEVEYDIRFSFNQLTLENIEQLATKLNE-LEEQYYPWFAQDLIISR---------- 750
            + P  +V+  I F  N ++L N+E  A +  E L+EQ+YPWFAQ +++ R          
Sbjct: 947  EAPGSDVQDKISFMINNISLANLEAKAKEFTEILKEQFYPWFAQYMVMKRKICLEKILVN 1006

Query: 751  -------------VTSEPNHIEKIVKLLDNVDLDPLNWQILQATYFNCXXXXXXXXXXXX 891
                          + EPN  +  +K LD V+   L+ +I+QATY NC            
Sbjct: 1007 TQVINXHPTSYYRASIEPNFHDLYLKFLDRVNSKALSKEIVQATYENCKVFVSSWIMCSL 1066

Query: 892  QF--------------SHLKALGLFLGQFTIGRNRGLSVRELDLESLVIQAYESGFMFFV 1029
            Q               S LK LG +LG+ TIGRN+ L  RE+D +SL+I+AYE G M  V
Sbjct: 1067 QVLLGSDLIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAV 1126

Query: 1030 IPFTSNVLTSCSSSV---NGSAKFMHIFELLFKIKLMPKLRLSIQFDIDILFNKLGLDLS 1200
            IPFTS +L  C SS+     +   M I  LL +I  MP L+++++FDI++LF  L +D+ 
Sbjct: 1127 IPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDMK 1186

Query: 1201 KVKPTCILKNRTMQVVDNPDFPDKKLGVVQ 1290
            ++ PT +LK+R  ++  NPDF +K +G  Q
Sbjct: 1187 EITPTSLLKDRKREIDGNPDFSNKDVGASQ 1216



 Score =  111 bits (277), Expect = 1e-21
 Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 2/207 (0%)
 Frame = +1

Query: 100  VKIDDTFGDEIETEATEFFNQIFSELVSADNLINFLTQLKESDEKRNGKIFDCIVYNLLV 279
            V   + + D+IE EA  +F Q+FS  ++ + ++  L + KES  KR   IF+C++ NL  
Sbjct: 660  VPATEGYTDDIEAEANSYFQQMFSGQLTIEAMVQMLARFKESSVKREQLIFECMIANLFE 719

Query: 280  EHDSFHKYSKTVLEKMSIFYGTLIKKGLISDLYLRVALRLILESILWPIETQMHNFGVRS 459
            E+  F KY +  L+  ++ +G++IK  L++ L L +ALR +L+++  P +++M  FG ++
Sbjct: 720  EYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKA 779

Query: 460  FEIFVDRPFEWPNDCIHILQL--VFTNDAASLATIKGELARISGTPHFDKQEPPEEVEYD 633
             E FVDR  EWP  C HILQ+  + +     +A I+  L RIS   H D       VE +
Sbjct: 780  LEQFVDRLIEWPQYCNHILQISHLRSTHVELVAFIEQALLRIS-AGHSDSDVSAGNVELN 838

Query: 634  IRFSFNQLTLENIEQLATKLNELEEQY 714
                     ++  +QL++ + EL+++Y
Sbjct: 839  -----GSGNIQPGQQLSSAM-ELQQKY 859


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  388 bits (996), Expect = e-105
 Identities = 226/504 (44%), Positives = 302/504 (59%), Gaps = 62/504 (12%)
 Frame = +1

Query: 1279 GVVQRLESVYMDWCNRCERVEDGEYTNVYMEWSQSIPDILGGDDTICSFLRHIMKTRV-- 1452
            G  +++  ++ +W   CE     +  + +         +L GDD    F R +M+  V  
Sbjct: 1888 GFREQVSMLFTEWYRICELPGGYDTASTHFTLQLHQNGLLKGDDLTDRFFRLLMELAVAH 1947

Query: 1453 --------------------SFVSIGHYAKLCFCILEFYG------SWKXXXXXXXXXXT 1554
                                SF++I  YAKL F IL+ +G      S K          T
Sbjct: 1948 CLSTEMINSGSLQSQPLQTMSFLAIEIYAKLVFSILKLFGWLLEQGSNKLFLLSKILAVT 2007

Query: 1555 AACIKVDSKHGKSV---HLYVGLFENWLHDLCSL---SDVSNFAVLTAFSDTFYCLRPSE 1716
               I  D++  K+         LF NWL DL SL   +D +N  +LTAF++ F+ L+P +
Sbjct: 2008 VRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLK 2067

Query: 1717 VPEFWFSWLELVSHTDFMPKLLCENDQKGWIYFQRLLVDLFQFMESLMRNSELEGLVQLL 1896
            VP F F+WLEL+SH  FMPK+L  N QKGW Y QRLLVDLFQFME  +R++EL   V++L
Sbjct: 2068 VPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGEPVRVL 2127

Query: 1897 HQNSVKVLLVIVQIVPEFLCDYYFSFCDVIPPKCIEMRNIVLSASPRNM----------- 2043
            ++ +++VLLV++   PEFLCDY+F+FCDVIPP CI+MRNI+LSA PR+M           
Sbjct: 2128 YKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLK 2187

Query: 2044 ------LNTYPRILSEFDGALKAYDMENVLNGYIKTRQQRPAILDELRQKILFSPNESSR 2205
                  +   PRILSE D ALKA  M+  ++ Y+KTRQQ    L EL+ K+L SPNE++ 
Sbjct: 2188 IDLLQEITQSPRILSEVDAALKAKQMKVDVDEYLKTRQQSSPFLSELKDKLLLSPNEAAS 2247

Query: 2206 AGTRYNAPLINSLVLYLGIQAV-------THAQLMPSGRPPDRFFV----DIFKTFVLEV 2352
            AGTRYN PLINSLVLY+G+QA+        H Q   +  P   F V    DIF+T ++++
Sbjct: 2248 AGTRYNVPLINSLVLYVGMQAIHQLQGRTPHTQTSANAFPLAVFSVGAALDIFQTLIVDL 2307

Query: 2353 DKEGRIQFLNAMANHLRYPNSHTHYFSTILLLLFLESHQEEIKEQITRVLLERLLANDPP 2532
            D EGR  FLNA+AN LRYPN++THYFS ILL LF ES+QE I+EQITRVLLERL+ N P 
Sbjct: 2308 DTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPH 2367

Query: 2533 PWGISLTFSELTQDPRYYFWSWPF 2604
            PWG+ +TF EL ++PRY FW+  F
Sbjct: 2368 PWGLLITFIELIKNPRYNFWNRSF 2391



 Score =  174 bits (441), Expect = 1e-40
 Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 6/235 (2%)
 Frame = +1

Query: 604  QEPPEEVEYDIRFSFNQLTLENIEQLATKLNE-LEEQYYPWFAQDLIISRVTSEPNHIEK 780
            + P  EV+  I F  N ++  NIE  A +  E L+EQYYPWFAQ +++ R + EPN  + 
Sbjct: 982  EAPGSEVQDKILFIINNVSAANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDL 1041

Query: 781  IVKLLDNVDLDPLNWQILQATYFNCXXXXXXXXXXXX--QFSHLKALGLFLGQFTIGRNR 954
             +K LD V+   LN +I+QATY NC              + S LK LG +LG+ TIGRN+
Sbjct: 1042 YLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ 1101

Query: 955  GLSVRELDLESLVIQAYESGFMFFVIPFTSNVLTSCSSSV---NGSAKFMHIFELLFKIK 1125
             L  RE+D +SL+++AYE G M  VIPFTS VL  C SS+     +   M I  LL +I 
Sbjct: 1102 VLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIY 1161

Query: 1126 LMPKLRLSIQFDIDILFNKLGLDLSKVKPTCILKNRTMQVVDNPDFPDKKLGVVQ 1290
             MP L+++++FDI++LF  L +D+  V PT +LK+R  ++  NPDF +K +G  Q
Sbjct: 1162 SMPNLKMNLKFDIEVLFKNLCVDMKDVTPTSLLKDRKREIEGNPDFSNKDVGASQ 1216



 Score =  118 bits (296), Expect = 8e-24
 Identities = 62/159 (38%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
 Frame = +1

Query: 112  DTFGDEIETEATEFFNQIFSELVSADNLINFLTQLKESDEKRNGKIFDCIVYNLLVEHDS 291
            D + D+IE EA  +F+Q+FS+ ++ + ++  LT+ KES  KR   IF+C++ NL  E+  
Sbjct: 668  DGYADDIEAEANSYFHQMFSDQLTINAMVQMLTRFKESSVKREKSIFECMIANLFEEYRF 727

Query: 292  FHKYSKTVLEKMSIFYGTLIKKGLISDLYLRVALRLILESILWPIETQMHNFGVRSFEIF 471
            F KY +  L+  ++ +G++IK  L++ L L +ALR +L+++  P +++M  FG  + E F
Sbjct: 728  FPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQF 787

Query: 472  VDRPFEWPNDCIHILQLVFTNDAAS--LATIKGELARIS 582
            VDR  EWP  C HILQ+       S  +A I+  LARIS
Sbjct: 788  VDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARIS 826


>gb|AAO22642.1| unknown protein [Arabidopsis thaliana]
          Length = 682

 Score =  384 bits (985), Expect = e-103
 Identities = 222/492 (45%), Positives = 293/492 (59%), Gaps = 50/492 (10%)
 Frame = +1

Query: 1279 GVVQRLESVYMDWCNRCERVEDGEYTNVYMEWSQSIPDILGGDDTICSFLRHIMKTRV-- 1452
            G   R+ +++ +W   CE     E              +L GDDT  SF R +++  V  
Sbjct: 153  GFQNRVSTLFKNWYQICELPGANETACSQYVLHLHQTGLLKGDDTTESFFRILLELSVAH 212

Query: 1453 ---------------------SFVSIGHYAKLCFCILEFY----GSWKXXXXXXXXXXTA 1557
                                 SF+ I  YAKL F IL+++     S +          T 
Sbjct: 213  CISSEDINSGAVQSPQQPQSPSFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMADTV 272

Query: 1558 ACIKVDSKHGKSV---HLYVGLFENWLHDLCSL---SDVSNFAVLTAFSDTFYCLRPSEV 1719
              I+ D++  K+      Y  LF NWL DLCSL   +D +NF VLTAF++ F+ L+P ++
Sbjct: 273  RFIQKDAEDKKTSLNSKPYFRLFINWLLDLCSLDPGTDGANFQVLTAFANAFHALQPLKI 332

Query: 1720 PEFWFSWLELVSHTDFMPKLLCENDQKGWIYFQRLLVDLFQFMESLMRNSELEGLVQLLH 1899
            P F F+WLELVSH  FMPKLL  N QKGW Y QRLLVDL QF+E  +RN+EL G V  L+
Sbjct: 333  PAFSFAWLELVSHRSFMPKLLTVNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPVHFLY 392

Query: 1900 QNSVKVLLVIVQIVPEFLCDYYFSFCDVIPPKCIEMRNIVLSASPRNM------------ 2043
            + +++VLLV++   PEFLCDY+F+FCDVIP  CI+MRNI+LS+ PRNM            
Sbjct: 393  KGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCIQMRNIILSSFPRNMRLPDPSTPNLKI 452

Query: 2044 -----LNTYPRILSEFDGALKAYDMENVLNGYIKTRQQRPAILDELRQKILFSPNESSRA 2208
                 +   P ILSE D ALKA  M+N ++ Y+ +RQQ    L EL+ K+L S +E+S A
Sbjct: 453  DLLPEIVEAPCILSEVDAALKAKQMKNDVDEYLTSRQQNSTFLSELKTKLLLSSSEASSA 512

Query: 2209 GTRYNAPLINSLVLYLGIQAVTHAQLMPSGRPPDRFFVDIFKTFVLEVDKEGRIQFLNAM 2388
            GTRY+ PLINSLVLY G+QA+   Q   + +  +   + +FK   +E+D EGR  FLNA+
Sbjct: 513  GTRYSVPLINSLVLYTGMQAIQQLQAGET-QAQNVVALQMFKYLSMELDTEGRYLFLNAI 571

Query: 2389 ANHLRYPNSHTHYFSTILLLLFLESHQEEIKEQITRVLLERLLANDPPPWGISLTFSELT 2568
            AN LRYPN+HTHYFS I+L LF ES QE I+EQITRVLLERL+ N P PWG+ +TF EL 
Sbjct: 572  ANQLRYPNNHTHYFSFIMLYLFFESDQEIIQEQITRVLLERLIVNRPHPWGLLITFIELI 631

Query: 2569 QDPRYYFWSWPF 2604
            ++PRY FW   F
Sbjct: 632  KNPRYSFWKQAF 643


>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2327

 Score =  384 bits (985), Expect = e-103
 Identities = 225/503 (44%), Positives = 301/503 (59%), Gaps = 65/503 (12%)
 Frame = +1

Query: 1291 RLESVYMDWCNRCER--VEDGEYTNVYMEWSQSIPDILGGDDTICSFLR--------HIM 1440
            ++  ++ +W   CE     D  + +  ++  Q+   +L GDD    F R        H +
Sbjct: 1794 KVSMLFTEWYRICELPGANDTAFAHFILQLHQN--GLLKGDDLTDRFFRLLTELAVAHCL 1851

Query: 1441 KTRV--------------SFVSIGHYAKLCFCILEFYGSW-------KXXXXXXXXXXTA 1557
             T +              SF++I  YAKL F IL+    W       K          T 
Sbjct: 1852 STEMINSGSLQSQPQQTMSFLAIDIYAKLVFSILKVLFGWLLEQGSNKLFLLSKILAVTV 1911

Query: 1558 ACIKVDSKHGKSV---HLYVGLFENWLHDLCSL---SDVSNFAVLTAFSDTFYCLRPSEV 1719
              I  D++  K+         LF NWL DL SL   +D +N  +LT F++ F+ L+P +V
Sbjct: 1912 RFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTGFANAFHALQPLKV 1971

Query: 1720 PEFWFSWLELVSHTDFMPKLLCENDQKGWIYFQRLLVDLFQFMESLMRNSELEGLVQLLH 1899
            P F F+WLEL+SH  FMPK+L  N QKGW Y QRLLVDLFQFME  +R++EL   V++L+
Sbjct: 1972 PAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGEPVRVLY 2031

Query: 1900 QNSVKVLLVIVQIVPEFLCDYYFSFCDVIPPKCIEMRNIVLSASPRNM------------ 2043
            + +++VLLV++   PEFLCDY+F+FCDVIPP CI+MRNI+LSA PR+M            
Sbjct: 2032 KGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKI 2091

Query: 2044 -----LNTYPRILSEFDGALKAYDMENVLNGYIKTRQQRPAILDELRQKILFSPNESSRA 2208
                 +   PRILSE D ALKA  M+  ++ Y+KTRQQ    L EL+ K+L SPNE++ A
Sbjct: 2092 DLLQEITQSPRILSEVDAALKAKQMKADVDEYLKTRQQSSPFLSELKDKMLLSPNEAASA 2151

Query: 2209 GTRYNAPLINSLVLYLGIQAV-------THAQLMPSGRPPDRFFV----DIFKTFVLEVD 2355
            GTRYN PLINSLVLY+G+QA+        H Q   +  P   F V    DIF+T ++++D
Sbjct: 2152 GTRYNVPLINSLVLYVGMQAIHQLQGRTPHTQTSANAFPLAVFSVGAALDIFQTLIVDLD 2211

Query: 2356 KEGRIQFLNAMANHLRYPNSHTHYFSTILLLLFLESHQEEIKEQITRVLLERLLANDPPP 2535
             EGR  FLNA+AN LRYPN++THYFS ILL LF ES+QE I+EQITRVLLERL+ N P P
Sbjct: 2212 TEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHP 2271

Query: 2536 WGISLTFSELTQDPRYYFWSWPF 2604
            WG+ +TF EL ++PRY FW+  F
Sbjct: 2272 WGLLITFIELIKNPRYNFWNRSF 2294



 Score =  134 bits (337), Expect = 1e-28
 Identities = 84/229 (36%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
 Frame = +1

Query: 604  QEPPEEVEYDIRFSFNQLTLENIEQLATKLNE-LEEQYYPWFAQDLIISRVTSEPNHIEK 780
            + P  EV+  I F  N ++  N+E  A +  E L+EQYYPWFAQ +++ R + EPN  + 
Sbjct: 955  EAPGSEVQDKILFIINNVSAANVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDL 1014

Query: 781  IVKLLDNVDLDPLNWQILQATYFNCXXXXXXXXXXXX--QFSHLKALGLFLGQFTIGRNR 954
             +K LD V+   LN +I+QATY NC              + S LK LG +LG+ TIGRN+
Sbjct: 1015 YLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ 1074

Query: 955  GLSVRELDLESLVIQAYESGFMFFVIPFTSNVLTSCSSSVNGSAKFMHIFELLFKIKLMP 1134
             L  RE+D +SL+++AYE G M  VIPFTS V                            
Sbjct: 1075 VLRAREIDPKSLIMEAYEKGLMIAVIPFTSKV---------------------------- 1106

Query: 1135 KLRLSIQFDIDILFNKLGLDLSKVKPTCILKNRTMQVVDNPDFPDKKLG 1281
                        LF  LG+D+  V PT +LK+R  +   NPDF +K +G
Sbjct: 1107 ------------LFKNLGVDMKDVTPTSLLKDRKREFEGNPDFSNKDVG 1143



 Score =  115 bits (289), Expect = 5e-23
 Identities = 62/165 (37%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
 Frame = +1

Query: 112  DTFGDEIETEATEFFNQIFSELVSADNLINFLTQLKESDEKRNGKIFDCIVYNLLVEHDS 291
            D + D+IE EA  +F+Q+FS+ ++ + ++  L + KES  KR   IF+C++ NL  E+  
Sbjct: 654  DGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECMIANLFEEYRF 713

Query: 292  FHKYSKTVLEKMSIFYGTLIKKGLISDLYLRVALRLILESILWPIETQMHNFGVRSFEIF 471
            F KY +  L+  ++ +G++IK  L++ L L +ALR +L+++  P +++M  FG  + E F
Sbjct: 714  FPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQF 773

Query: 472  VDRPFEWPNDCIHILQLVFTNDAAS--LATIKGELARISGTPHFD 600
            VDR  EWP  C HILQ+       S  ++ I+  LARIS + H D
Sbjct: 774  VDRLIEWPQYCNHILQISHLRSTHSEIVSFIEQALARIS-SGHLD 817


>ref|NP_001184889.1| CCR4-NOT transcription complex subunit 1 [Arabidopsis thaliana]
            gi|332189257|gb|AEE27378.1| CCR4-NOT transcription
            complex subunit 1 [Arabidopsis thaliana]
          Length = 2377

 Score =  384 bits (985), Expect = e-103
 Identities = 222/492 (45%), Positives = 293/492 (59%), Gaps = 50/492 (10%)
 Frame = +1

Query: 1279 GVVQRLESVYMDWCNRCERVEDGEYTNVYMEWSQSIPDILGGDDTICSFLRHIMKTRV-- 1452
            G   R+ +++ +W   CE     E              +L GDDT  SF R +++  V  
Sbjct: 1848 GFQNRVSTLFKNWYQICELPGANETACSQYVLHLHQTGLLKGDDTTESFFRILLELSVAH 1907

Query: 1453 ---------------------SFVSIGHYAKLCFCILEFY----GSWKXXXXXXXXXXTA 1557
                                 SF+ I  YAKL F IL+++     S +          T 
Sbjct: 1908 CISSEDINSGAVQSPQQPQSPSFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMADTV 1967

Query: 1558 ACIKVDSKHGKSV---HLYVGLFENWLHDLCSL---SDVSNFAVLTAFSDTFYCLRPSEV 1719
              I+ D++  K+      Y  LF NWL DLCSL   +D +NF VLTAF++ F+ L+P ++
Sbjct: 1968 RFIQKDAEDKKTSLNSKPYFRLFINWLLDLCSLDPGTDGANFQVLTAFANAFHALQPLKI 2027

Query: 1720 PEFWFSWLELVSHTDFMPKLLCENDQKGWIYFQRLLVDLFQFMESLMRNSELEGLVQLLH 1899
            P F F+WLELVSH  FMPKLL  N QKGW Y QRLLVDL QF+E  +RN+EL G V  L+
Sbjct: 2028 PAFSFAWLELVSHRSFMPKLLTVNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPVHFLY 2087

Query: 1900 QNSVKVLLVIVQIVPEFLCDYYFSFCDVIPPKCIEMRNIVLSASPRNM------------ 2043
            + +++VLLV++   PEFLCDY+F+FCDVIP  CI+MRNI+LS+ PRNM            
Sbjct: 2088 KGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCIQMRNIILSSFPRNMRLPDPSTPNLKI 2147

Query: 2044 -----LNTYPRILSEFDGALKAYDMENVLNGYIKTRQQRPAILDELRQKILFSPNESSRA 2208
                 +   P ILSE D ALKA  M+N ++ Y+ +RQQ    L EL+ K+L S +E+S A
Sbjct: 2148 DLLPEIVEAPCILSEVDAALKAKQMKNDVDEYLTSRQQNSTFLSELKTKLLLSSSEASSA 2207

Query: 2209 GTRYNAPLINSLVLYLGIQAVTHAQLMPSGRPPDRFFVDIFKTFVLEVDKEGRIQFLNAM 2388
            GTRY+ PLINSLVLY G+QA+   Q   + +  +   + +FK   +E+D EGR  FLNA+
Sbjct: 2208 GTRYSVPLINSLVLYTGMQAIQQLQAGET-QAQNVVALQMFKYLSMELDTEGRYLFLNAI 2266

Query: 2389 ANHLRYPNSHTHYFSTILLLLFLESHQEEIKEQITRVLLERLLANDPPPWGISLTFSELT 2568
            AN LRYPN+HTHYFS I+L LF ES QE I+EQITRVLLERL+ N P PWG+ +TF EL 
Sbjct: 2267 ANQLRYPNNHTHYFSFIMLYLFFESDQEIIQEQITRVLLERLIVNRPHPWGLLITFIELI 2326

Query: 2569 QDPRYYFWSWPF 2604
            ++PRY FW   F
Sbjct: 2327 KNPRYSFWKQAF 2338



 Score =  171 bits (434), Expect = 8e-40
 Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 6/235 (2%)
 Frame = +1

Query: 604  QEPPEEVEYDIRFSFNQLTLENIEQLATKLNE-LEEQYYPWFAQDLIISRVTSEPNHIEK 780
            + PP +V+  + F  N ++  NIE    +  E L +QYYPWFAQ +++ R + EPN  + 
Sbjct: 942  EAPPSDVQDKVSFIINNISTTNIESKGKEFAEILPQQYYPWFAQYMVMKRASIEPNFHDL 1001

Query: 781  IVKLLDNVDLDPLNWQILQATYFNCXXXXXXXXXXXX--QFSHLKALGLFLGQFTIGRNR 954
             +K LD VD   L  +ILQ TY NC              + S LK LG +LG+ TIGRN 
Sbjct: 1002 YLKFLDKVDSKLLFKEILQNTYENCKVLLGSELIKSSSEERSLLKNLGSWLGRLTIGRNY 1061

Query: 955  GLSVRELDLESLVIQAYESGFMFFVIPFTSNVLTSCSSSV---NGSAKFMHIFELLFKIK 1125
             L  RE+D +SL+++AYE G M  VIPFTS VL  C +S+     +   M I  LL +I 
Sbjct: 1062 VLRAREIDPKSLIVEAYEKGLMIAVIPFTSKVLEPCQNSIAYQPPNPWTMAILGLLAEIY 1121

Query: 1126 LMPKLRLSIQFDIDILFNKLGLDLSKVKPTCILKNRTMQVVDNPDFPDKKLGVVQ 1290
             MP L+++++FDI++LF  LG+++ +V PT +LK+R  ++  NPDF +K  GV Q
Sbjct: 1122 SMPNLKMNLKFDIEVLFKNLGVEMKEVVPTSLLKDRKREIDGNPDFSNKDPGVTQ 1176



 Score =  111 bits (277), Expect = 1e-21
 Identities = 62/159 (38%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
 Frame = +1

Query: 112  DTFGDEIETEATEFFNQIFSELVSADNLINFLTQLKESDEKRNGKIFDCIVYNLLVEHDS 291
            + +GD++E EA  +F+Q+FS  +S D ++  L++ KES   R   IF+C++ NL  E+  
Sbjct: 661  NAYGDDVEAEANAYFHQMFSSHLSVDAMVQMLSRYKESLVPREKLIFECMIANLFEEYRF 720

Query: 292  FHKYSKTVLEKMSIFYGTLIKKGLISDLYLRVALRLILESILWPIETQMHNFGVRSFEIF 471
            F KY +  L+  SI +G++IK  LIS L L +ALRL+L+S+  P +++M  FG ++ E F
Sbjct: 721  FPKYPERQLKIASILFGSVIKHQLISSLTLGMALRLVLDSLRKPADSKMFLFGSKALEQF 780

Query: 472  VDRPFEWPNDCIHILQL--VFTNDAASLATIKGELARIS 582
            V+R  E P  C HILQ+  + +     +  I+  L+RIS
Sbjct: 781  VNRLVELPQYCNHILQISHLRSTHPELVTVIEQALSRIS 819