BLASTX nr result

ID: Lithospermum22_contig00000132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000132
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154707.1| DEAD-box ATP-dependent RNA helicase 56 [Arab...   355   2e-95
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   355   2e-95
ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|2...   353   6e-95
ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2...   353   6e-95
ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arab...   353   8e-95

>ref|NP_001154707.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
            gi|332004264|gb|AED91647.1| DEAD-box ATP-dependent RNA
            helicase 56 [Arabidopsis thaliana]
          Length = 468

 Score =  355 bits (910), Expect = 2e-95
 Identities = 183/197 (92%), Positives = 186/197 (94%)
 Frame = +3

Query: 510  FPRAPNVLTVTCNPFQPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQ 689
            F RA   L V  N   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQ
Sbjct: 273  FHRARMGLNVPSN-IDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQ 331

Query: 690  VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYRGFKEGHKRILVATDLVGR 869
            VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRY+ FKEGHKRILVATDLVGR
Sbjct: 332  VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGR 391

Query: 870  GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEV 1049
            GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS+VLNQVQERFEV
Sbjct: 392  GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEV 451

Query: 1050 DIKELPEQIDTSTYMPS 1100
            DIKELPEQIDTSTYMPS
Sbjct: 452  DIKELPEQIDTSTYMPS 468


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
            vinifera]
          Length = 428

 Score =  355 bits (910), Expect = 2e-95
 Identities = 180/188 (95%), Positives = 182/188 (96%), Gaps = 2/188 (1%)
 Frame = +3

Query: 543  CNPFQ--PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 716
            C  F   PMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241  CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 717  RAAELNKLLVECNFPSICIHSGMSQEERLTRYRGFKEGHKRILVATDLVGRGIDIERVNI 896
            RAAELNKLLVECNFPSICIHSGM QEERLTRY+GFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301  RAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 897  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 1076
            VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
Sbjct: 361  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 1077 DTSTYMPS 1100
            DTSTYMPS
Sbjct: 421  DTSTYMPS 428


>ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|222866290|gb|EEF03421.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  353 bits (906), Expect = 6e-95
 Identities = 179/188 (95%), Positives = 182/188 (96%), Gaps = 2/188 (1%)
 Frame = +3

Query: 543  CNPFQ--PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 716
            C  F   PMEIYVDDEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241  CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 717  RAAELNKLLVECNFPSICIHSGMSQEERLTRYRGFKEGHKRILVATDLVGRGIDIERVNI 896
            RAAELNKLLVECNFPSICIHSGMSQEERL RY+GFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301  RAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 897  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 1076
            VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
Sbjct: 361  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 1077 DTSTYMPS 1100
            DTSTYMPS
Sbjct: 421  DTSTYMPS 428


>ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  353 bits (906), Expect = 6e-95
 Identities = 179/188 (95%), Positives = 182/188 (96%), Gaps = 2/188 (1%)
 Frame = +3

Query: 543  CNPFQ--PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 716
            C  F   PMEIYVDDEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241  CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 717  RAAELNKLLVECNFPSICIHSGMSQEERLTRYRGFKEGHKRILVATDLVGRGIDIERVNI 896
            RAAELNKLLVECNFPSICIHSGMSQEERL RY+GFKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301  RAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 897  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 1076
            VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
Sbjct: 361  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 420

Query: 1077 DTSTYMPS 1100
            DTSTYMPS
Sbjct: 421  DTSTYMPS 428


>ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
            lyrata] gi|297317299|gb|EFH47721.1| hypothetical protein
            ARALYDRAFT_487950 [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score =  353 bits (905), Expect = 8e-95
 Identities = 179/188 (95%), Positives = 182/188 (96%), Gaps = 2/188 (1%)
 Frame = +3

Query: 543  CNPFQ--PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 716
            C  F   PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 240  CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 299

Query: 717  RAAELNKLLVECNFPSICIHSGMSQEERLTRYRGFKEGHKRILVATDLVGRGIDIERVNI 896
            RAAELNKLLVECNFPSICIHSGMSQEERLTRY+ FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 300  RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359

Query: 897  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 1076
            VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS+VLNQVQERFEVDIKELPEQI
Sbjct: 360  VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 419

Query: 1077 DTSTYMPS 1100
            DTSTYMPS
Sbjct: 420  DTSTYMPS 427


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