BLASTX nr result

ID: Lithospermum22_contig00000060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000060
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloro...   179   6e-43
ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|2...   176   9e-42
ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus...   175   1e-41
ref|XP_004149413.1| PREDICTED: 50S ribosomal protein L21, chloro...   174   2e-41
gb|ABK94900.1| unknown [Populus trichocarpa]                          173   4e-41

>ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
           vinifera] gi|297745266|emb|CBI40346.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score =  179 bits (455), Expect = 6e-43
 Identities = 100/173 (57%), Positives = 120/173 (69%), Gaps = 13/173 (7%)
 Frame = +1

Query: 208 TNVASISQSLSSLKLTQMPSFVPKST--------AQLAEPQTT---VPEES--QKPKGEE 348
           +N   +S    +L   + PS +PKS+         + +EP +    V EE   + PK EE
Sbjct: 35  SNFGFLSPHSLTLSSRRPPSPLPKSSEFEPSVIEVESSEPNSEALQVVEEPPPELPKREE 94

Query: 349 IFAVIMVGSRQYIVFPGRYIYTQRLKGANVNDKIVLNKVLLVGSKTKTWIGKPIVSNAVV 528
           IFAV+M+GSRQYIVFPGRYIYTQRLKGA+VNDKI+LN+VLLVG+KT T+IGKP+V NA V
Sbjct: 95  IFAVVMIGSRQYIVFPGRYIYTQRLKGADVNDKIILNRVLLVGTKTSTYIGKPVVPNAAV 154

Query: 529 HAVVEEQTLDXXXXXXXXXXXXNYRRNIGHRQPITRIRIVGITGYEDSPFATL 687
           HAVVEEQ L+            NYRRNIGHRQP TRIRI GITGY+DSP  TL
Sbjct: 155 HAVVEEQGLNPKVMVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDSPAVTL 207


>ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|222862430|gb|EEE99936.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  176 bits (445), Expect = 9e-42
 Identities = 96/173 (55%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
 Frame = +1

Query: 178 KYTSISNSTSTNVASISQSLSS-LKLTQMPSFV--PKSTAQLAEPQTTVPEESQKPKGEE 348
           K   +S     + ++ ++ LSS L  ++ P+F   PK+  + A  Q     + +  K EE
Sbjct: 32  KTLCLSKPNFGSFSNTTKKLSSPLIFSKRPTFFARPKANPEPAATQIVEVAKEEPTKREE 91

Query: 349 IFAVIMVGSRQYIVFPGRYIYTQRLKGANVNDKIVLNKVLLVGSKTKTWIGKPIVSNAVV 528
           IFAV+MVGSRQYIV PGR++Y QRLKGANVNDKIVLNKVLLVG++T  +IGKP+V+NA V
Sbjct: 92  IFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVLLVGTRTSAYIGKPVVTNASV 151

Query: 529 HAVVEEQTLDXXXXXXXXXXXXNYRRNIGHRQPITRIRIVGITGYEDSPFATL 687
           HAVVEEQ LD            NYRRNIGHRQP TRIRI GITGY+D P +TL
Sbjct: 152 HAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRITGITGYQDFPVSTL 204


>ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
           gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 214

 Score =  175 bits (443), Expect = 1e-41
 Identities = 100/183 (54%), Positives = 117/183 (63%), Gaps = 17/183 (9%)
 Frame = +1

Query: 190 ISNSTSTNVASISQSLSSLKLTQMPSFVP--KSTAQLA---------------EPQTTVP 318
           IS +  ++   I     S KLT  PSF+P  KS+   A               EP   V 
Sbjct: 30  ISKTHFSSNPKIGPFTKSHKLTTRPSFLPILKSSESDAPVLEVEDANAPELQPEPAPFVE 89

Query: 319 EESQKPKGEEIFAVIMVGSRQYIVFPGRYIYTQRLKGANVNDKIVLNKVLLVGSKTKTWI 498
              ++ K EEIFAV+MVG RQYIV PGR+IY QRLKGANVNDK+ LNKVLLVG++T T+I
Sbjct: 90  VAKEETKREEIFAVVMVGGRQYIVIPGRFIYVQRLKGANVNDKVALNKVLLVGTRTTTYI 149

Query: 499 GKPIVSNAVVHAVVEEQTLDXXXXXXXXXXXXNYRRNIGHRQPITRIRIVGITGYEDSPF 678
           GKP+V+NAVVHAVVEEQ L+            NYRRNIGHRQP TRIRI GITGY+D P 
Sbjct: 150 GKPVVTNAVVHAVVEEQGLNPKVVVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPA 209

Query: 679 ATL 687
            TL
Sbjct: 210 VTL 212


>ref|XP_004149413.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Cucumis
           sativus] gi|449496845|ref|XP_004160241.1| PREDICTED: 50S
           ribosomal protein L21, chloroplastic-like [Cucumis
           sativus]
          Length = 206

 Score =  174 bits (442), Expect = 2e-41
 Identities = 100/177 (56%), Positives = 119/177 (67%), Gaps = 9/177 (5%)
 Frame = +1

Query: 184 TSISNSTSTNVASISQSLSSLKLTQMP---SFVPKSTAQLAEPQTTVPEESQK------P 336
           T   +S S +   +S S SSLKL+      SF+  S+        + P +SQ       P
Sbjct: 28  TPFPSSNSNHHFPLSTSPSSLKLSSSRPSFSFLLNSSDSETALIDSDPADSQTLEIPSPP 87

Query: 337 KGEEIFAVIMVGSRQYIVFPGRYIYTQRLKGANVNDKIVLNKVLLVGSKTKTWIGKPIVS 516
             EEIFAV+M+GSRQYIVFPGRYI+TQRLKGA+VNDKI LNKVLLVG+KT+T+IGKP+V+
Sbjct: 88  NREEIFAVVMIGSRQYIVFPGRYIHTQRLKGADVNDKITLNKVLLVGTKTQTYIGKPVVT 147

Query: 517 NAVVHAVVEEQTLDXXXXXXXXXXXXNYRRNIGHRQPITRIRIVGITGYEDSPFATL 687
           NA VHAVVEEQ LD            NYRRNIGHRQP TRIRI  I+GY+D P  TL
Sbjct: 148 NAAVHAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEISGYQDYPATTL 204


>gb|ABK94900.1| unknown [Populus trichocarpa]
          Length = 225

 Score =  173 bits (439), Expect = 4e-41
 Identities = 100/192 (52%), Positives = 122/192 (63%), Gaps = 22/192 (11%)
 Frame = +1

Query: 178 KYTSISNSTSTNVASISQSLSS-LKLTQMPSF-----VPKSTAQLAEPQTTVPEESQKP- 336
           K   +S     + ++ ++ LSS L  ++ P+F     V +S A + E +T VP     P 
Sbjct: 32  KTLCLSKPNFGSFSNTTKKLSSPLIFSKRPTFFARPKVSESEAPVVEAETEVPVSEANPE 91

Query: 337 ---------------KGEEIFAVIMVGSRQYIVFPGRYIYTQRLKGANVNDKIVLNKVLL 471
                          K EEIFAV+MVGSRQYIV PGR++Y QRLKGANVNDKIVLNKVLL
Sbjct: 92  PAATQIVEVAKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVLL 151

Query: 472 VGSKTKTWIGKPIVSNAVVHAVVEEQTLDXXXXXXXXXXXXNYRRNIGHRQPITRIRIVG 651
           VG++T  +IGKP+V+NA VHAVVEEQ LD            NYRRNIGHRQP TRIRI G
Sbjct: 152 VGTRTSAYIGKPVVTNASVHAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRITG 211

Query: 652 ITGYEDSPFATL 687
           ITGY+D P +TL
Sbjct: 212 ITGYQDFPVSTL 223


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