BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000050
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515034.1| photosystem II core complex proteins psbY, c...   106   2e-21
ref|NP_001240940.1| uncharacterized protein LOC100779397 [Glycin...   104   8e-21
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   103   1e-20
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      101   7e-20
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      101   7e-20

>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score =  106 bits (264), Expect = 2e-21
 Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
 Frame = -3

Query: 475 QPALNQINRMR-TKGVIVGLGLSGLAATEFLM-----HXXXXXXXXXXXANDNRGQLLLF 314
           +PALNQINRMR TKGVI+GLGL GLAAT F+                  A+DNRGQLLLF
Sbjct: 109 RPALNQINRMRETKGVIIGLGLGGLAATGFMAAAPEASASENIAMIADAASDNRGQLLLF 168

Query: 313 VVAPAILWVLYNILQPALNQINRMRS 236
           VVAPAILWVLYNILQPALNQINRMRS
Sbjct: 169 VVAPAILWVLYNILQPALNQINRMRS 194


>ref|NP_001240940.1| uncharacterized protein LOC100779397 [Glycine max]
           gi|255646582|gb|ACU23765.1| unknown [Glycine max]
          Length = 187

 Score =  104 bits (259), Expect = 8e-21
 Identities = 56/81 (69%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = -3

Query: 475 QPALNQINRMR-TKGVIVGLGLSGLAATEFLMHXXXXXXXXXXXANDNRGQLLLFVVAPA 299
           QPALNQ+NRMR TKGVI+GLGL GLA      H           A+DNRGQLLLFVV PA
Sbjct: 106 QPALNQLNRMRSTKGVIIGLGLGGLAGLAAAPHAWAAASEAAAAASDNRGQLLLFVVTPA 165

Query: 298 ILWVLYNILQPALNQINRMRS 236
           I WVLYNILQPALNQ+NRMRS
Sbjct: 166 IAWVLYNILQPALNQLNRMRS 186



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -3

Query: 340 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 236
           DNRG  LL  + PAI WVL+NILQPALNQ+NRMRS
Sbjct: 83  DNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRS 117


>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 5/85 (5%)
 Frame = -3

Query: 475 QPALNQINRMR-TKGVIVGLGLSGLAATEFLM----HXXXXXXXXXXXANDNRGQLLLFV 311
           QPALNQ+N+MR TKGVI+GLGL GLAA+ F++                ++DNRGQLLLFV
Sbjct: 116 QPALNQLNKMRSTKGVIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFV 175

Query: 310 VAPAILWVLYNILQPALNQINRMRS 236
           V PAILWVLYNILQPALNQ+NRMRS
Sbjct: 176 VTPAILWVLYNILQPALNQLNRMRS 200



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -3

Query: 340 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 236
           DNRG  LL  + PAI WVL+NILQPALNQ+N+MRS
Sbjct: 93  DNRGLALLLPIIPAIAWVLFNILQPALNQLNKMRS 127


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  101 bits (251), Expect = 7e-20
 Identities = 59/84 (70%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
 Frame = -3

Query: 475 QPALNQINRMR-TKGVIVGLGLSGLAATEFLMHXXXXXXXXXXXA---NDNRGQLLLFVV 308
           QPALNQINRMR TKGVIVGLGL GLAA+ F+             A   +DNRG LLL VV
Sbjct: 112 QPALNQINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGTLLLIVV 171

Query: 307 APAILWVLYNILQPALNQINRMRS 236
           APAILWVLYNILQPALNQIN+MRS
Sbjct: 172 APAILWVLYNILQPALNQINKMRS 195



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 340 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMR 239
           DNRG  LL  + PAI WVL+NILQPALNQINRMR
Sbjct: 89  DNRGIALLLPLIPAIAWVLFNILQPALNQINRMR 122


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  101 bits (251), Expect = 7e-20
 Identities = 59/84 (70%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
 Frame = -3

Query: 475 QPALNQINRMR-TKGVIVGLGLSGLAATEFLMHXXXXXXXXXXXA---NDNRGQLLLFVV 308
           QPALNQINRMR TKGVIVGLGL GLAA+ F+             A   +DNRG LLL VV
Sbjct: 112 QPALNQINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGTLLLIVV 171

Query: 307 APAILWVLYNILQPALNQINRMRS 236
           APAILWVLYNILQPALNQIN+MRS
Sbjct: 172 APAILWVLYNILQPALNQINKMRS 195



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 340 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMR 239
           DNRG  LL  + PAI WVL+NILQPALNQINRMR
Sbjct: 89  DNRGIALLLPLIPAIAWVLFNILQPALNQINRMR 122