BLASTX nr result

ID: Lithospermum22_contig00000021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000021
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R...   416   e-114
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...   413   e-113
sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding pro...   413   e-113
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R...   412   e-113
dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein...   411   e-113

>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  416 bits (1070), Expect = e-114
 Identities = 198/209 (94%), Positives = 202/209 (96%)
 Frame = +1

Query: 229 PSFAGKAVKLSPSAPELMGNGRVSMRKTAVKKTVSDSPWYGPDRVKYLGPFSGEAPSYLT 408
           PSFAGKAVKLSPSAPELMGNGRVSMRKTA K   S SPWYGPDRVKYLGPFSGE PSYLT
Sbjct: 11  PSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70

Query: 409 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 588
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 589 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 768
           FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 190

Query: 769 GGSFDPLGLADDPEAFAELKVKEIKNGRL 855
           GGSFDPLGLADDPEAFAELKVKEIKNGRL
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRL 219


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  413 bits (1062), Expect = e-113
 Identities = 196/209 (93%), Positives = 202/209 (96%)
 Frame = +1

Query: 229 PSFAGKAVKLSPSAPELMGNGRVSMRKTAVKKTVSDSPWYGPDRVKYLGPFSGEAPSYLT 408
           PSFAG+AVKLSPSAPE+ GNGRVSMRKT  K   S SPWYGPDRVKYLGPFSGE+PSYLT
Sbjct: 11  PSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 409 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 588
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 589 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 768
           FKAGSQIFS+GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP
Sbjct: 131 FKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 190

Query: 769 GGSFDPLGLADDPEAFAELKVKEIKNGRL 855
           GGSFDPLGLADDPEAFAELKVKEIKNGRL
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRL 219


>sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
           AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
           Precursor gi|19823|emb|CAA36957.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 265

 Score =  413 bits (1062), Expect = e-113
 Identities = 197/209 (94%), Positives = 202/209 (96%)
 Frame = +1

Query: 229 PSFAGKAVKLSPSAPELMGNGRVSMRKTAVKKTVSDSPWYGPDRVKYLGPFSGEAPSYLT 408
           PSFAG+AVKLSPSAPE+ GNGRVSMRKT  K   S SPWYGPDRVKYLGPFSGE+PSYLT
Sbjct: 11  PSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 409 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 588
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 589 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 768
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 190

Query: 769 GGSFDPLGLADDPEAFAELKVKEIKNGRL 855
           GGSFDPLGLA+DPEAFAELKVKEIKNGRL
Sbjct: 191 GGSFDPLGLAEDPEAFAELKVKEIKNGRL 219


>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  412 bits (1060), Expect = e-113
 Identities = 197/209 (94%), Positives = 201/209 (96%)
 Frame = +1

Query: 229 PSFAGKAVKLSPSAPELMGNGRVSMRKTAVKKTVSDSPWYGPDRVKYLGPFSGEAPSYLT 408
           PSFAGKAVKLSPSAPELMGNGRVSMRKTA K   S SPWYGPDRVKYLGPFSGE PSYLT
Sbjct: 11  PSFAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70

Query: 409 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 588
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 589 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 768
           FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRVAGGPLGEV DP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVAGGPLGEVTDPIYP 190

Query: 769 GGSFDPLGLADDPEAFAELKVKEIKNGRL 855
           GGSFDPLGLADDPEAFAELKVKEIKNGRL
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRL 219


>dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  411 bits (1057), Expect = e-113
 Identities = 197/209 (94%), Positives = 201/209 (96%)
 Frame = +1

Query: 229 PSFAGKAVKLSPSAPELMGNGRVSMRKTAVKKTVSDSPWYGPDRVKYLGPFSGEAPSYLT 408
           PSFAG+AVKLSPSA E+ GNGRVSMRKT  K   S SPWYGPDRVKYLGPFSGEAPSYLT
Sbjct: 11  PSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGEAPSYLT 70

Query: 409 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 588
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 589 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 768
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYP 190

Query: 769 GGSFDPLGLADDPEAFAELKVKEIKNGRL 855
           GGSFDPLGLA+DPEAFAELKVKEIKNGRL
Sbjct: 191 GGSFDPLGLAEDPEAFAELKVKEIKNGRL 219


Top