BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000013
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...   306   1e-80
sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, c...   303   6e-80
emb|CBI34828.3| unnamed protein product [Vitis vinifera]              301   2e-79
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   301   2e-79
ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri...   298   2e-78

>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
           ribonucleoprotein [Nicotiana sylvestris]
           gi|19756|emb|CAA37885.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 315

 Score =  306 bits (783), Expect = 1e-80
 Identities = 174/299 (58%), Positives = 200/299 (66%), Gaps = 18/299 (6%)
 Frame = +1

Query: 151 KLPTMATNTFLISLPSL-----TSKPNSHIQLSKPFQPSKNSFKFKNLXXXXXXXXXXKK 315
           K  +MATN+ LISLP L      SK  ++  LS   +P K                  KK
Sbjct: 10  KPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIK---LLHLSCTYSPCILSPKK 66

Query: 316 RFNLFALEEENSTIVLEDQENXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------- 462
           + ++ AL+EE +T++L+ Q                                         
Sbjct: 67  KTSVSALQEEENTLILDGQGQESGDLFNFEPSGEETEEEGFVEAVGDAGESDEVEADEEE 126

Query: 463 --FSEPPEDAKLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMST 636
             F EPPEDAKLFVGNL +DVDSE LA LFEQAGVVEIAEVIYNR TDQSRGFGFVTMST
Sbjct: 127 EEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMST 186

Query: 637 VEEAEKAVAMFNRYDLNGRLLTVNKAAPRGSRPERAPREFEPFFRIYVGNLPWDVDNSRL 816
           VEEAEKAV M+NRYD+NGRLLTVNKAA RG RPER PR FE  +RIYVGN+PW +D++RL
Sbjct: 187 VEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARL 246

Query: 817 EQIFSEHGKVVDARVVYDRESGRSRGFGFVRMASESDQNDAIANLDGQSLDGRTIRVNV 993
           EQ+FSEHGKVV ARVVYDRE+GRSRGFGFV MASE++ +DAIANLDGQSLDGRTIRVNV
Sbjct: 247 EQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNV 305



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = +1

Query: 487 KLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVEEAEKAVAM 666
           +++VGN+ + +D  +L  LF + G V  A V+Y+R T +SRGFGFVTM++  E   A+A 
Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290

Query: 667 FNRYDLNGRLLTVNKAAPRGSR 732
            +   L+GR + VN A  R  R
Sbjct: 291 LDGQSLDGRTIRVNVAEDRSRR 312


>sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
           Flags: Precursor gi|100388|pir||S12109
           ribonucleoprotein, 28K, precursor - common tobacco
           gi|19750|emb|CAA37880.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 276

 Score =  303 bits (776), Expect = 6e-80
 Identities = 167/284 (58%), Positives = 200/284 (70%), Gaps = 8/284 (2%)
 Frame = +1

Query: 163 MATNTFLISLP---SLTSKPNSHIQLSKPFQPSKNSFKFKNLXXXXXXXXXXKKRFNLF- 330
           MATN  LISLP   + T   +S+  LS   +P   S     L           KR   F 
Sbjct: 1   MATNGCLISLPPFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSL-------NKRTTQFP 53

Query: 331 ----ALEEENSTIVLEDQENXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSEPPEDAKLFV 498
                L E+++T+VL+DQE                             + EP EDAKLFV
Sbjct: 54  TFVSVLSEDDNTLVLDDQEQGGDFPSFVGEAGETEE------------YQEPSEDAKLFV 101

Query: 499 GNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVEEAEKAVAMFNRY 678
           GNL +D+DSE LA LF+QAGVVEIAEVIYNR TD+SRGFGFVTMSTVEEA+KAV ++++Y
Sbjct: 102 GNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQY 161

Query: 679 DLNGRLLTVNKAAPRGSRPERAPREFEPFFRIYVGNLPWDVDNSRLEQIFSEHGKVVDAR 858
           DLNGRLLTVNKAAPRGSRPERAPR F+P +RIYVGN+PWD+D++RLEQ+FSEHGKVV AR
Sbjct: 162 DLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSAR 221

Query: 859 VVYDRESGRSRGFGFVRMASESDQNDAIANLDGQSLDGRTIRVN 990
           VV+DRESGRSRGFGFV M+SE++ ++AIANLDGQ+LDGRTIRVN
Sbjct: 222 VVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVN 265



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 33/82 (40%), Positives = 53/82 (64%)
 Frame = +1

Query: 487 KLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVEEAEKAVAM 666
           +++VGN+ +D+D  +L  +F + G V  A V+++R + +SRGFGFVTMS+  E  +A+A 
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251

Query: 667 FNRYDLNGRLLTVNKAAPRGSR 732
            +   L+GR + VN A  R  R
Sbjct: 252 LDGQTLDGRTIRVNAAEERPRR 273


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  301 bits (772), Expect = 2e-79
 Identities = 147/177 (83%), Positives = 163/177 (92%)
 Frame = +1

Query: 463 FSEPPEDAKLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVE 642
           +SEPPE+AKLFVGNL +D+DSEKLA LF++AGVVEIAEVIYNR TDQSRGFGF+TMSTVE
Sbjct: 86  YSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVE 145

Query: 643 EAEKAVAMFNRYDLNGRLLTVNKAAPRGSRPERAPREFEPFFRIYVGNLPWDVDNSRLEQ 822
           EAEKAV MFNRYDLNGR LTVNKAAPRGSRPER P+ FEP FRIYVGNLPW VD++RLEQ
Sbjct: 146 EAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQ 205

Query: 823 IFSEHGKVVDARVVYDRESGRSRGFGFVRMASESDQNDAIANLDGQSLDGRTIRVNV 993
           +FSEHGKVVDARVVYDR++ RSRGFGFV M+SE++ NDAIA LDGQSLDGR IRVNV
Sbjct: 206 VFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNV 262



 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 36/82 (43%), Positives = 51/82 (62%)
 Frame = +1

Query: 487 KLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVEEAEKAVAM 666
           +++VGNL + VD  +L  +F + G V  A V+Y+R T +SRGFGFVTMS+  E   A+A 
Sbjct: 188 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 247

Query: 667 FNRYDLNGRLLTVNKAAPRGSR 732
            +   L+GR + VN A  R  R
Sbjct: 248 LDGQSLDGRAIRVNVAEERPRR 269


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  301 bits (772), Expect = 2e-79
 Identities = 147/177 (83%), Positives = 163/177 (92%)
 Frame = +1

Query: 463 FSEPPEDAKLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVE 642
           +SEPPE+AKLFVGNL +D+DSEKLA LF++AGVVEIAEVIYNR TDQSRGFGF+TMSTVE
Sbjct: 126 YSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVE 185

Query: 643 EAEKAVAMFNRYDLNGRLLTVNKAAPRGSRPERAPREFEPFFRIYVGNLPWDVDNSRLEQ 822
           EAEKAV MFNRYDLNGR LTVNKAAPRGSRPER P+ FEP FRIYVGNLPW VD++RLEQ
Sbjct: 186 EAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQ 245

Query: 823 IFSEHGKVVDARVVYDRESGRSRGFGFVRMASESDQNDAIANLDGQSLDGRTIRVNV 993
           +FSEHGKVVDARVVYDR++ RSRGFGFV M+SE++ NDAIA LDGQSLDGR IRVNV
Sbjct: 246 VFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNV 302



 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 36/82 (43%), Positives = 51/82 (62%)
 Frame = +1

Query: 487 KLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVEEAEKAVAM 666
           +++VGNL + VD  +L  +F + G V  A V+Y+R T +SRGFGFVTMS+  E   A+A 
Sbjct: 228 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 287

Query: 667 FNRYDLNGRLLTVNKAAPRGSR 732
            +   L+GR + VN A  R  R
Sbjct: 288 LDGQSLDGRAIRVNVAEERPRR 309


>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223550401|gb|EEF51888.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 319

 Score =  298 bits (763), Expect = 2e-78
 Identities = 147/177 (83%), Positives = 163/177 (92%)
 Frame = +1

Query: 463 FSEPPEDAKLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVE 642
           F EPPEDAK+FVGNL +DVDS+KLA LFEQAG VEIAEVIYNR TD SRGFGFV+MSTVE
Sbjct: 134 FEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVE 193

Query: 643 EAEKAVAMFNRYDLNGRLLTVNKAAPRGSRPERAPREFEPFFRIYVGNLPWDVDNSRLEQ 822
           EAEKAV MF+R+DL+GRLLTVNKAAPRGSRPER PR FEP +RIYVGNLPWDVDN+RLEQ
Sbjct: 194 EAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQ 253

Query: 823 IFSEHGKVVDARVVYDRESGRSRGFGFVRMASESDQNDAIANLDGQSLDGRTIRVNV 993
           IFSEHGKVVDARVVYDR++GRSRGFGFV M++E++ NDAIA LDG+SLDGR IRVNV
Sbjct: 254 IFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNV 310



 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 39/89 (43%), Positives = 54/89 (60%)
 Frame = +1

Query: 724 GSRPERAPREFEPFFRIYVGNLPWDVDNSRLEQIFSEHGKVVDARVVYDRESGRSRGFGF 903
           GS PE A  E     +I+VGNLP+DVD+ +L  +F + G V  A V+Y+RE+  SRGFGF
Sbjct: 127 GSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGF 186

Query: 904 VRMASESDQNDAIANLDGQSLDGRTIRVN 990
           V M++  +   A+       LDGR + VN
Sbjct: 187 VSMSTVEEAEKAVEMFHRHDLDGRLLTVN 215



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = +1

Query: 487 KLFVGNLSFDVDSEKLAHLFEQAGVVEIAEVIYNRATDQSRGFGFVTMSTVEEAEKAVAM 666
           +++VGNL +DVD+ +L  +F + G V  A V+Y+R T +SRGFGFVTMST  E   A+A 
Sbjct: 236 RIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAA 295

Query: 667 FNRYDLNGRLLTVNKAAPRGSR 732
            +   L+GR + VN A  R  R
Sbjct: 296 LDGRSLDGRAIRVNVAEQRPRR 317