BLASTX nr result

ID: Lithospermum22_contig00000011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000011
         (2145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2...   290   1e-75
gb|ABK95423.1| unknown [Populus trichocarpa]                          290   1e-75
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...   288   5e-75
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...   287   9e-75
ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g...   285   3e-74

>ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  290 bits (742), Expect = 1e-75
 Identities = 147/176 (83%), Positives = 159/176 (90%), Gaps = 1/176 (0%)
 Frame = -2

Query: 1298 MSGLMQSPSAQNF-GSHSSSSGLIVKRAIRVDIPVDQYPNFNFVGRLLGPRGNSLKRVEA 1122
            MSG++Q  SAQN+  S  SSSGLI KR IRVDIPVD+YPN+NFVGRLLGPRGNSLKRVEA
Sbjct: 126  MSGMLQPSSAQNWLSSQGSSSGLIAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 185

Query: 1121 STDCRVLIRGRGSIKDSVKEEMMRGKLGYEHLNEPLHVIVEAELPVEIIDARLMQAREIL 942
            ST+CRVLIRGRGSIKD  KEEMMRGK GYEHLNEPLH++VE ELPVEI+DARLMQA EIL
Sbjct: 186  STECRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEIL 245

Query: 941  EDLLKPVDESQDFFKKQQLRELAMLNGTLREGSPQMSGSVSPFNSSLGMKRAKTRG 774
            EDLLKPVDESQD++KKQQLRELAMLNGTLRE    MSGSVSPFN+SLGMKRAKTRG
Sbjct: 246  EDLLKPVDESQDYYKKQQLRELAMLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 301


>gb|ABK95423.1| unknown [Populus trichocarpa]
          Length = 176

 Score =  290 bits (742), Expect = 1e-75
 Identities = 147/176 (83%), Positives = 159/176 (90%), Gaps = 1/176 (0%)
 Frame = -2

Query: 1298 MSGLMQSPSAQNF-GSHSSSSGLIVKRAIRVDIPVDQYPNFNFVGRLLGPRGNSLKRVEA 1122
            MSG++Q  SAQN+  S  SSSGLI KR IRVDIPVD+YPN+NFVGRLLGPRGNSLKRVEA
Sbjct: 1    MSGMLQPSSAQNWLSSQGSSSGLIAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 60

Query: 1121 STDCRVLIRGRGSIKDSVKEEMMRGKLGYEHLNEPLHVIVEAELPVEIIDARLMQAREIL 942
            ST+CRVLIRGRGSIKD  KEEMMRGK GYEHLNEPLH++VE ELPVEI+DARLMQA EIL
Sbjct: 61   STECRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEIL 120

Query: 941  EDLLKPVDESQDFFKKQQLRELAMLNGTLREGSPQMSGSVSPFNSSLGMKRAKTRG 774
            EDLLKPVDESQD++KKQQLRELAMLNGTLRE    MSGSVSPFN+SLGMKRAKTRG
Sbjct: 121  EDLLKPVDESQDYYKKQQLRELAMLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 176


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  288 bits (736), Expect = 5e-75
 Identities = 144/176 (81%), Positives = 160/176 (90%), Gaps = 1/176 (0%)
 Frame = -2

Query: 1298 MSGLMQSPSAQNF-GSHSSSSGLIVKRAIRVDIPVDQYPNFNFVGRLLGPRGNSLKRVEA 1122
            MSG++Q  SAQN+  S  SSSGLIVKR IRVDIPVD+YPN+NFVGRLLGPRGNSLKRVEA
Sbjct: 127  MSGILQPSSAQNWLSSQGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 186

Query: 1121 STDCRVLIRGRGSIKDSVKEEMMRGKLGYEHLNEPLHVIVEAELPVEIIDARLMQAREIL 942
            ST+CRVLIRGRGSIKD  +E+MMRGK GYEHLNEPLH++VE ELPVEI+DARLMQAREIL
Sbjct: 187  STECRVLIRGRGSIKDPAREDMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQAREIL 246

Query: 941  EDLLKPVDESQDFFKKQQLRELAMLNGTLREGSPQMSGSVSPFNSSLGMKRAKTRG 774
            EDLL+PVDESQD++KKQQLRELA+LNGT RE    MSGSVSPFN+SLGMKRAKTRG
Sbjct: 247  EDLLRPVDESQDYYKKQQLRELALLNGTFREEGSPMSGSVSPFNNSLGMKRAKTRG 302


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223527289|gb|EEF29442.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 300

 Score =  287 bits (734), Expect = 9e-75
 Identities = 145/176 (82%), Positives = 161/176 (91%), Gaps = 1/176 (0%)
 Frame = -2

Query: 1298 MSGLMQSPSAQNF-GSHSSSSGLIVKRAIRVDIPVDQYPNFNFVGRLLGPRGNSLKRVEA 1122
            MSGL+Q  SAQN+  S  SSSGLIVKR IRVDIP+++YP++NFVGRLLGPRGNSLKRVEA
Sbjct: 125  MSGLIQPSSAQNWLSSQGSSSGLIVKRTIRVDIPIERYPSYNFVGRLLGPRGNSLKRVEA 184

Query: 1121 STDCRVLIRGRGSIKDSVKEEMMRGKLGYEHLNEPLHVIVEAELPVEIIDARLMQAREIL 942
            ST+CRVLIRGRGSIKD  +EEMMRGK GYEHLNEPLH++VEAELPVEI+DAR+ QAREIL
Sbjct: 185  STECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARIAQAREIL 244

Query: 941  EDLLKPVDESQDFFKKQQLRELAMLNGTLREGSPQMSGSVSPFNSSLGMKRAKTRG 774
            EDLLKPVDESQDF+KKQQLRELAMLNGTLRE    MSGSVSPF++SLGMKRAKTRG
Sbjct: 245  EDLLKPVDESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 300


>ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g56140-like [Cucumis
            sativus] gi|449508337|ref|XP_004163285.1| PREDICTED: KH
            domain-containing protein At5g56140-like [Cucumis
            sativus]
          Length = 296

 Score =  285 bits (730), Expect = 3e-74
 Identities = 150/200 (75%), Positives = 170/200 (85%), Gaps = 2/200 (1%)
 Frame = -2

Query: 1367 LGSGRVYTPLSLGVSD-PVSYGL*MSGLMQSPSAQNF-GSHSSSSGLIVKRAIRVDIPVD 1194
            L SG +++     +S  P  +   MSGL+Q+ SAQN+  S  SSSGLIVKR IRVD+PV+
Sbjct: 97   LASGGIFSNGGADMSAWPSRFQSEMSGLLQASSAQNWLTSQGSSSGLIVKRTIRVDVPVE 156

Query: 1193 QYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDSVKEEMMRGKLGYEHLNEPL 1014
             +PN+NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD  +EEMMRGK GYEHLNEPL
Sbjct: 157  TFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPL 216

Query: 1013 HVIVEAELPVEIIDARLMQAREILEDLLKPVDESQDFFKKQQLRELAMLNGTLREGSPQM 834
            H++VEAELPVEIIDARLMQAREILEDLLKP++ES DF+KKQQLRELAMLNGTLRE    M
Sbjct: 217  HILVEAELPVEIIDARLMQAREILEDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPM 276

Query: 833  SGSVSPFNSSLGMKRAKTRG 774
            S SVSPF++SLGMKRAKTRG
Sbjct: 277  SSSVSPFHNSLGMKRAKTRG 296


Top