BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000006
         (3864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...  1820   0.0  
ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...  1800   0.0  
ref|NP_001061055.1| Os08g0162100 [Oryza sativa Japonica Group] g...  1713   0.0  
ref|XP_003573449.1| PREDICTED: topless-related protein 1-like [B...  1710   0.0  
ref|NP_001167872.2| ramosa 1 enhancer locus 2 [Zea mays] gi|3033...  1703   0.0  

>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
            gi|223540775|gb|EEF42335.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1137

 Score = 1820 bits (4714), Expect = 0.0
 Identities = 887/1141 (77%), Positives = 991/1141 (86%), Gaps = 2/1141 (0%)
 Frame = +2

Query: 131  MSSLSRELVFLILQFLDEEKFKDTVHKLEQESGFYFNMKYFEDQVQAGEWEEVERYLSGF 310
            MSSLSRELVFLILQFLDEEKFK+TVHKLEQESGF+FNMK+FEDQVQAGEW+EVERYL GF
Sbjct: 1    MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKHFEDQVQAGEWDEVERYLCGF 60

Query: 311  TKVEDNRYSMKIFFEIRKQKYLEALDRNDRPKAVEFLVKDLKVFASFNEDLFKEITQLLT 490
            TKVEDNRYSMKIFFEIRKQKYLEALDR DR KAVE L KDLKVFASFNE+LFKEITQLLT
Sbjct: 61   TKVEDNRYSMKIFFEIRKQKYLEALDRQDRAKAVEILCKDLKVFASFNEELFKEITQLLT 120

Query: 491  LDNFRQNEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLTLPAFRASRLRTLINQSLN 670
            LDNFRQNEQLSKYGDTKSAR+IMLVELKKLIEANPLFRDKLT PAF++SRLRTLINQSLN
Sbjct: 121  LDNFRQNEQLSKYGDTKSARNIMLVELKKLIEANPLFRDKLTFPAFKSSRLRTLINQSLN 180

Query: 671  WQHQLCKNPRPNPDIKTLFTDHSCSSS--NGTRAATPTNNPLAGSIPKPGVFPPLGVHGL 844
            WQHQLCKNPRPNPDIKTLFTDHSCS S  NG R   PTN+P+ G IPK G FPP+G HG 
Sbjct: 181  WQHQLCKNPRPNPDIKTLFTDHSCSPSTANGARPPPPTNSPIVGPIPKAGAFPPIGAHG- 239

Query: 845  QPFQXXXXXXXXAIAGWMSSANPSMPHGVVAGPPPGLVQAPGAASFLKHPRTPQGPLGMD 1024
             PFQ        AIAGWMSS NPS+PH  VA  PPGLVQ   AA+FLKHPRTP G  G+D
Sbjct: 240  -PFQPVVSPSPGAIAGWMSSNNPSLPHPAVAAGPPGLVQPSSAAAFLKHPRTPTGMTGID 298

Query: 1025 YQTADSEHMIKRMRAGPPDEVSFSGSTHASNHFSPDDLPKTVLRNLSQGSNVMSMDFHPQ 1204
            YQ+ADSEH++KRMR G  DEVSFSG  H  N +SPDDLPKTV+R+LSQGSNVMSMDFHPQ
Sbjct: 299  YQSADSEHLMKRMRTGQSDEVSFSGVAHTPNVYSPDDLPKTVMRSLSQGSNVMSMDFHPQ 358

Query: 1205 QPTVLLVGTNVGDISIWEVGSRERLVHKTFKMWDISSCSMQLQTTLVKDATISVNRCIWG 1384
            Q T+LLVGTNVGDIS+WEVGSRERL HK FK+WD+S+ SM LQ  L+ DA ISVNRC+WG
Sbjct: 359  QQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDLSAASMPLQAALLNDAAISVNRCVWG 418

Query: 1385 PDGSILGAAFSKHIVQIYTHSPAGELRQHLEIDAHVGGVNDIAFAHPNKQLCVVTCGDDK 1564
            PDG +LG AFSKHIVQ+Y ++P GELRQHLEIDAHVGGVNDIAFAHPNKQLC+VTCGDDK
Sbjct: 419  PDGLMLGVAFSKHIVQLYAYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDK 478

Query: 1565 TIKVWDAVSGRRLYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDSLGSRVDY 1744
             IKVWDAV+GRR YTFEGHEAPVYSVCPHYKE+IQFIFSTAIDGKIKAWLYDSLGSRVDY
Sbjct: 479  MIKVWDAVAGRRQYTFEGHEAPVYSVCPHYKENIQFIFSTAIDGKIKAWLYDSLGSRVDY 538

Query: 1745 DAPGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIRRTYSGFRKRSMGVVQFD 1924
            DAPGLWCT MAYSADG+RLFSCGTSKEGESHLVEWNESEG I+RTYSGFRKRS GVVQFD
Sbjct: 539  DAPGLWCTMMAYSADGSRLFSCGTSKEGESHLVEWNESEGTIKRTYSGFRKRSSGVVQFD 598

Query: 1925 TTRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLKFNKEGSLLAVTTSENGIK 2104
            TTR+RFLAAGDEFQIKFWDMDN NMLT  DADGGLPASPRL+FNKEGSLLAVTTS+NGIK
Sbjct: 599  TTRSRFLAAGDEFQIKFWDMDNTNMLTAVDADGGLPASPRLRFNKEGSLLAVTTSDNGIK 658

Query: 2105 ILANTDGQRMIRMVESRALEGSRGISEAVNVKPPVTGPLGLTANTSTPLVPMLERADRTQ 2284
            ILAN+DG R+IRM+ESRA++ +R  SE +N KP +   LG  AN S+ L   LER DR  
Sbjct: 659  ILANSDGLRLIRMLESRAIDKNRSPSEPINSKPLIVNALGPVANVSSGLATALERVDRMP 718

Query: 2285 QSISIGNLATTESSRVVDVKPRIADHMDRVKTWKYPDIADPTHLKTLRLPDTLTASKVVR 2464
             +++I +L T +SSR+VDVKPRI+D +D++K+WK PDI D +HLK LRLPD++   KVVR
Sbjct: 719  PAVAISSLGTMDSSRLVDVKPRISDELDKIKSWKIPDIVDQSHLKALRLPDSIATGKVVR 778

Query: 2465 LLYTNSGXXXXXXXXXXXHKLWKWQRNERNPSGKSSASTVPQLWQPPNGALMSNDVNDSK 2644
            L+YTNSG           HKLWKWQR+ERNPSGK++A   PQLWQPP+G LM+ND++DSK
Sbjct: 779  LIYTNSGLALLALASNAVHKLWKWQRSERNPSGKATAYVAPQLWQPPSGTLMTNDISDSK 838

Query: 2645 PAEDSVSCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMXXXXXXTYLAFHPQDNNII 2824
            PAE+S +CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFM      T+LAFHPQDNNII
Sbjct: 839  PAEESAACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNII 898

Query: 2825 AIGMEDSTIQIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGADAQLCVWSIDGWE 3004
            AIGMEDS++QIYNVRVDEVKTKLKGHQ +ITGLAFSQSLNVLVSSGADAQLCVWSIDGWE
Sbjct: 899  AIGMEDSSVQIYNVRVDEVKTKLKGHQNRITGLAFSQSLNVLVSSGADAQLCVWSIDGWE 958

Query: 3005 KKRTRPIQAPPGVSSPLVGATRVQFHNDQSRVLVVHESQIALYDTQLECLHSWYPRDSLS 3184
            KK++R IQAPPG  SPL G T+VQFHNDQ+ +LVVHESQIA+YD++LECL SWYP+D+L+
Sbjct: 959  KKKSRFIQAPPGRQSPLAGETKVQFHNDQTHLLVVHESQIAIYDSKLECLRSWYPKDTLT 1018

Query: 3185 AGISSAIYSCDGMLVVTGFSDGAVGIFDVENLRLRCRIAPSAYLPSSIASNNGSSFPVVI 3364
            A I+SAIYS DG+LV TGF DGAVG+FD ++LR+RCRIAPSAY+PSS+A NN  ++P+VI
Sbjct: 1019 APIASAIYSSDGLLVYTGFCDGAVGVFDADSLRVRCRIAPSAYIPSSVAGNN--AYPLVI 1076

Query: 3365 AAHPSDANQFALGMSDGAVYVVEPSDAEQKWGAFSSQDNGALPSIPSSSALNGQPSETPS 3544
            AAHPS+ NQ ALGMSDGAV+VVEPSD E KWG  SSQDNG+ PS  S+ +L+GQ SE PS
Sbjct: 1077 AAHPSEPNQIALGMSDGAVHVVEPSDVELKWGGPSSQDNGSHPSNSSNPSLSGQQSEHPS 1136

Query: 3545 R 3547
            R
Sbjct: 1137 R 1137


>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
            gi|297737353|emb|CBI26554.3| unnamed protein product
            [Vitis vinifera]
          Length = 1135

 Score = 1800 bits (4662), Expect = 0.0
 Identities = 877/1139 (76%), Positives = 977/1139 (85%)
 Frame = +2

Query: 131  MSSLSRELVFLILQFLDEEKFKDTVHKLEQESGFYFNMKYFEDQVQAGEWEEVERYLSGF 310
            MSSLSRELVFLILQFLDEEKFK+TVHKLEQESGF+FNMK+FEDQVQAGEW+EVERYL GF
Sbjct: 1    MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKHFEDQVQAGEWDEVERYLCGF 60

Query: 311  TKVEDNRYSMKIFFEIRKQKYLEALDRNDRPKAVEFLVKDLKVFASFNEDLFKEITQLLT 490
            TKVEDNRYSMKIFFEIRKQKYLEALDR DR KAVE LVKDLKVFASFNE+LFKEITQLLT
Sbjct: 61   TKVEDNRYSMKIFFEIRKQKYLEALDRQDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120

Query: 491  LDNFRQNEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLTLPAFRASRLRTLINQSLN 670
            L+NFRQNEQLSKYGDTKSAR IML+ELKKLIEANPLFRDKLT PAF+ASRLRTLINQSLN
Sbjct: 121  LENFRQNEQLSKYGDTKSARGIMLIELKKLIEANPLFRDKLTFPAFKASRLRTLINQSLN 180

Query: 671  WQHQLCKNPRPNPDIKTLFTDHSCSSSNGTRAATPTNNPLAGSIPKPGVFPPLGVHGLQP 850
            WQHQLCKNPR NPDIKTLFTDH+C+ +NG R   PTNNPL G IPK G FPP+G H   P
Sbjct: 181  WQHQLCKNPRSNPDIKTLFTDHACTPTNGARPPPPTNNPLVGPIPKAGAFPPIGAHN--P 238

Query: 851  FQXXXXXXXXAIAGWMSSANPSMPHGVVAGPPPGLVQAPGAASFLKHPRTPQGPLGMDYQ 1030
            FQ        AIAGWMSS NPS+PH  VA  PP LVQ   AA+FLKH RTP G  GMDYQ
Sbjct: 239  FQPVVSPSPGAIAGWMSSTNPSLPHAAVAAGPPSLVQPSTAAAFLKHQRTPTGVTGMDYQ 298

Query: 1031 TADSEHMIKRMRAGPPDEVSFSGSTHASNHFSPDDLPKTVLRNLSQGSNVMSMDFHPQQP 1210
            + DSEH++KR+R G  DEVSFSG  HA N +S DDLPK+V+R ++QGSNVMSMDFHPQQ 
Sbjct: 299  SGDSEHLMKRIRTGQSDEVSFSGVAHAPNVYSQDDLPKSVVRTITQGSNVMSMDFHPQQQ 358

Query: 1211 TVLLVGTNVGDISIWEVGSRERLVHKTFKMWDISSCSMQLQTTLVKDATISVNRCIWGPD 1390
            TVLLVGTNVGDIS+WEVGSRERL HK FK+WDIS+CSM LQT L+KDATISVNRC+WGPD
Sbjct: 359  TVLLVGTNVGDISLWEVGSRERLAHKPFKVWDISACSMPLQTALLKDATISVNRCVWGPD 418

Query: 1391 GSILGAAFSKHIVQIYTHSPAGELRQHLEIDAHVGGVNDIAFAHPNKQLCVVTCGDDKTI 1570
            G ILG AFSKHIVQIYT++P GELRQHLEIDAH+GGVND+AFAHPNKQLC+VTCGDDKTI
Sbjct: 419  GLILGVAFSKHIVQIYTYNPTGELRQHLEIDAHIGGVNDVAFAHPNKQLCIVTCGDDKTI 478

Query: 1571 KVWDAVSGRRLYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDSLGSRVDYDA 1750
            KVWDA +GRRLYTFEGHEAPVYSVCPHYKE+IQFIFSTAIDGKIKAWLYD LGSRVDYDA
Sbjct: 479  KVWDAQTGRRLYTFEGHEAPVYSVCPHYKENIQFIFSTAIDGKIKAWLYDCLGSRVDYDA 538

Query: 1751 PGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIRRTYSGFRKRSMGVVQFDTT 1930
            PG WCT MAYSADGTRLFSCGTSK+GESHLVEWNESEGAI+RTY GFRKRS+GVVQFDTT
Sbjct: 539  PGHWCTMMAYSADGTRLFSCGTSKDGESHLVEWNESEGAIKRTYLGFRKRSLGVVQFDTT 598

Query: 1931 RNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLKFNKEGSLLAVTTSENGIKIL 2110
            RNRFLAAGDEFQIKFWDMDN N+LT  +A+GGLPASPRL+FNKEGSLLAVTT++NGIKIL
Sbjct: 599  RNRFLAAGDEFQIKFWDMDNTNILTAVEAEGGLPASPRLRFNKEGSLLAVTTNDNGIKIL 658

Query: 2111 ANTDGQRMIRMVESRALEGSRGISEAVNVKPPVTGPLGLTANTSTPLVPMLERADRTQQS 2290
            AN DG R+ RM+ESR +EG RG SE +N KP +   LG  AN S  + P LER+DR Q +
Sbjct: 659  ANNDGLRLTRMLESRPMEGHRGPSEPINSKPLIVNALGPAANVSAAMSPSLERSDRIQPA 718

Query: 2291 ISIGNLATTESSRVVDVKPRIADHMDRVKTWKYPDIADPTHLKTLRLPDTLTASKVVRLL 2470
            +SI NLAT +SSR+VDVKP+I+D ++++K+WK PDI D + LK LRLPD +T  KVVRL+
Sbjct: 719  VSINNLATMDSSRLVDVKPKISDDLEKIKSWKIPDIVDQSQLKALRLPDPVTTGKVVRLI 778

Query: 2471 YTNSGXXXXXXXXXXXHKLWKWQRNERNPSGKSSASTVPQLWQPPNGALMSNDVNDSKPA 2650
            YTNSG           HKLWKWQR+ERNP GKS+A  VPQLWQP NG LM+ND  D+ P 
Sbjct: 779  YTNSGLALLALISNAVHKLWKWQRSERNPLGKSTAYVVPQLWQPANGTLMTNDTGDNNPP 838

Query: 2651 EDSVSCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMXXXXXXTYLAFHPQDNNIIAI 2830
            E+S +CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFM      T+LAFHPQDNNIIAI
Sbjct: 839  EESAACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNIIAI 898

Query: 2831 GMEDSTIQIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGADAQLCVWSIDGWEKK 3010
            GMEDSTIQIYNVRVDEVKTKLKGHQK++TGLAFSQ LN LVSSGADAQLCVWSIDGWEK+
Sbjct: 899  GMEDSTIQIYNVRVDEVKTKLKGHQKRVTGLAFSQILNCLVSSGADAQLCVWSIDGWEKR 958

Query: 3011 RTRPIQAPPGVSSPLVGATRVQFHNDQSRVLVVHESQIALYDTQLECLHSWYPRDSLSAG 3190
            ++R IQAP G SSPLVG T+VQFHNDQ+ +LVVHESQIA+YD++LEC+ SW P+DSL A 
Sbjct: 959  KSRFIQAPAGRSSPLVGDTKVQFHNDQAHLLVVHESQIAVYDSKLECVRSWSPKDSLPAP 1018

Query: 3191 ISSAIYSCDGMLVVTGFSDGAVGIFDVENLRLRCRIAPSAYLPSSIASNNGSSFPVVIAA 3370
            ISSAIYSCD MLV  GF DGAVG+FD ++LRLRCRIAPSAY+PS   S+    +P+VIAA
Sbjct: 1019 ISSAIYSCDSMLVYAGFGDGAVGVFDADSLRLRCRIAPSAYIPSPALSS--GVYPLVIAA 1076

Query: 3371 HPSDANQFALGMSDGAVYVVEPSDAEQKWGAFSSQDNGALPSIPSSSALNGQPSETPSR 3547
            HPS+ NQ ALGMSDGAV+VVEP+D E KWG    QDNG++PS  S+ AL+GQP+E P R
Sbjct: 1077 HPSEPNQIALGMSDGAVHVVEPTDTEPKWGGQPPQDNGSIPSNSSNPALSGQPTELPPR 1135


>ref|NP_001061055.1| Os08g0162100 [Oryza sativa Japonica Group]
            gi|113623024|dbj|BAF22969.1| Os08g0162100 [Oryza sativa
            Japonica Group] gi|125560238|gb|EAZ05686.1| hypothetical
            protein OsI_27917 [Oryza sativa Indica Group]
            gi|371501278|dbj|BAL44266.1| ASP1 protein [Oryza sativa
            Japonica Group]
          Length = 1133

 Score = 1713 bits (4437), Expect = 0.0
 Identities = 832/1135 (73%), Positives = 951/1135 (83%), Gaps = 2/1135 (0%)
 Frame = +2

Query: 131  MSSLSRELVFLILQFLDEEKFKDTVHKLEQESGFYFNMKYFEDQVQAGEWEEVERYLSGF 310
            MSSLSRELVFLILQFLDEEKFK+TVHKLEQES FYFNMK+FED VQ GEW+EVE+YLSGF
Sbjct: 1    MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF 60

Query: 311  TKVEDNRYSMKIFFEIRKQKYLEALDRNDRPKAVEFLVKDLKVFASFNEDLFKEITQLLT 490
            TKVEDNRYSMKIFFEIRKQKYLEALDR+DR KAVE LVKDLKVFASFNE+LFKEITQLLT
Sbjct: 61   TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120

Query: 491  LDNFRQNEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLTLPAFRASRLRTLINQSLN 670
            L+NFRQNEQLSKYGDTKSAR+IML+ELKKLIEANPLFRDKL  P F+ SRLRTLINQSLN
Sbjct: 121  LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQSLN 180

Query: 671  WQHQLCKNPRPNPDIKTLFTDHSCSS-SNGTRAATPTNNPLAGSIPKPGVFPPLGVHGLQ 847
            WQHQLCKNPRPNPDIKTLFTDHSC++ +NG RA  P N PL G IPK   FPP+G H   
Sbjct: 181  WQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANGPLVGPIPKSAAFPPMGAHA-- 238

Query: 848  PFQXXXXXXXXAIAGWMSSANPSMPHGVVAGPPPGLVQAPGAASFLKHPRTPQGPLGMDY 1027
            PFQ        AIAGWM++ANPS+PH  VA  PPGLVQ P  A+FLKHPRTP     +DY
Sbjct: 239  PFQPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNTAAFLKHPRTPTSAPAIDY 298

Query: 1028 QTADSEHMIKRMRAGPPDEVSFSGSTHASNHFSPDDLPKTVLRNLSQGSNVMSMDFHPQQ 1207
            Q+ADSEH++KRMR G PDEVSFSG++H +N ++ DDLPK V+RNL+QGSNVMS+DFHP Q
Sbjct: 299  QSADSEHLMKRMRVGQPDEVSFSGASHPANIYTQDDLPKQVVRNLNQGSNVMSLDFHPVQ 358

Query: 1208 PTVLLVGTNVGDISIWEVGSRERLVHKTFKMWDISSCSMQLQTTLVKDATISVNRCIWGP 1387
             T+LLVGTNVGDI IWEVGSRER+ HKTFK+WDISSC++ LQ  L+KDA ISVNRC+W P
Sbjct: 359  QTILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISVNRCLWSP 418

Query: 1388 DGSILGAAFSKHIVQIYTHSPAGELRQHLEIDAHVGGVNDIAFAHPNKQLCVVTCGDDKT 1567
            DGSILG AFSKHIVQ Y     GELRQ  EIDAH+GGVNDIAF+HPNK L ++TCGDDK 
Sbjct: 419  DGSILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKL 478

Query: 1568 IKVWDAVSGRRLYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDSLGSRVDYD 1747
            IKVWDA +G++ YTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYD LGSRVDYD
Sbjct: 479  IKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYD 538

Query: 1748 APGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIRRTYSGFRKRSMGVVQFDT 1927
            APG WCTTMAYSADGTRLFSCGTSK+G+SHLVEWNE+EGAI+RTY+GFRKRS+GVVQFDT
Sbjct: 539  APGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDT 598

Query: 1928 TRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLKFNKEGSLLAVTTSENGIKI 2107
            TRNRFLAAGDEF +KFWDMDN N+LT  D DGGLPASPRL+FN+EGSLLAVT +ENGIKI
Sbjct: 599  TRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANENGIKI 658

Query: 2108 LANTDGQRMIRMVESRALEGSRGISEAVNVKPPVTGPLGLTANTSTPLVPMLERADRTQQ 2287
            LANTDGQR++RM+ESRA EGSRG  + +N KPP+   LG  +N S+P+    ER DR   
Sbjct: 659  LANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALP 718

Query: 2288 SISIGNLATTESSRVVDVKPRIADHMDRVKTWKYPDIADPTHLKTLRLPDT-LTASKVVR 2464
            ++S+  LA  + SR  DVKPRI D  ++VKTWK  DI D  HL+ LR+PDT  T+SKVVR
Sbjct: 719  TVSMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVR 778

Query: 2465 LLYTNSGXXXXXXXXXXXHKLWKWQRNERNPSGKSSASTVPQLWQPPNGALMSNDVNDSK 2644
            LLYTN+G           HKLWKWQR +RNP+GKS+AS  PQ+WQP NG LM+ND +D  
Sbjct: 779  LLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGN 838

Query: 2645 PAEDSVSCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMXXXXXXTYLAFHPQDNNII 2824
            P E++ +CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFM      T+LAFHPQDNNII
Sbjct: 839  P-EEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNII 897

Query: 2825 AIGMEDSTIQIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGADAQLCVWSIDGWE 3004
            AIGMEDSTIQIYNVRVDEVK+KLKGH K+ITGLAFSQS+N+LVSSGADAQLC WSIDGWE
Sbjct: 898  AIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCAWSIDGWE 957

Query: 3005 KKRTRPIQAPPGVSSPLVGATRVQFHNDQSRVLVVHESQIALYDTQLECLHSWYPRDSLS 3184
            KK++R IQ+P   S  LVG TRVQFHNDQ+ +LVVHESQ+A+YD +LECL SW PR++L 
Sbjct: 958  KKKSRYIQSPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYDAKLECLRSWSPREALP 1017

Query: 3185 AGISSAIYSCDGMLVVTGFSDGAVGIFDVENLRLRCRIAPSAYLPSSIASNNGSSFPVVI 3364
            A ISSAIYSCDG+L+  GF DGA+G+F+ E+LRLRCRIAPSAY+P S+ S+ GS +P+V+
Sbjct: 1018 APISSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSM-SSGGSVYPMVV 1076

Query: 3365 AAHPSDANQFALGMSDGAVYVVEPSDAEQKWGAFSSQDNGALPSIPSSSALNGQP 3529
            AAHP + NQ A+GMSDGAV+VVEP D++ KWG    QDNG  P+I ++ A   +P
Sbjct: 1077 AAHPLEPNQIAVGMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAPAAANKP 1131


>ref|XP_003573449.1| PREDICTED: topless-related protein 1-like [Brachypodium distachyon]
          Length = 1135

 Score = 1710 bits (4428), Expect = 0.0
 Identities = 840/1142 (73%), Positives = 957/1142 (83%), Gaps = 3/1142 (0%)
 Frame = +2

Query: 131  MSSLSRELVFLILQFLDEEKFKDTVHKLEQESGFYFNMKYFEDQVQAGEWEEVERYLSGF 310
            MSSLSRELVFLILQFLDEEKFK+TVHKLEQESGFYFNMK+FED VQ GEW+EVERYLSGF
Sbjct: 1    MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFYFNMKHFEDMVQGGEWDEVERYLSGF 60

Query: 311  TKVEDNRYSMKIFFEIRKQKYLEALDRNDRPKAVEFLVKDLKVFASFNEDLFKEITQLLT 490
            TKVEDNRYSMKIFFEIRKQKYLEALDR+DR KAVE LVKDLKVFASFNE+LFKEITQLLT
Sbjct: 61   TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120

Query: 491  LDNFRQNEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLTLPAFRASRLRTLINQSLN 670
            LDNFRQNEQLSKYGDTKSAR+IML+ELKKLIEANPLFRDKL  P F+ASRLRTLINQSLN
Sbjct: 121  LDNFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKASRLRTLINQSLN 180

Query: 671  WQHQLCKNPRPNPDIKTLFTDHSCSS-SNGTRAATPTNNPLAGSIPKPGVFPPLGVHGLQ 847
            WQHQLCKNPRPNPDIKTLFTDHSC++ +NG RA  P N PLAG IPK   FPP+G H   
Sbjct: 181  WQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANGPLAGPIPKSAGFPPMGAHA-- 238

Query: 848  PFQXXXXXXXXAIAGWMSSANPSMPHGVVAGPPPGLVQAPGAASFLKHPRTPQGPLGMDY 1027
            PFQ        AIAGWM++ANPS+PH  VA  P GLVQ P  A+FLKHPRTP    G+DY
Sbjct: 239  PFQPVVTPN--AIAGWMTNANPSLPHAAVAQGPSGLVQPPNTAAFLKHPRTPTSAPGIDY 296

Query: 1028 QTADSEHMIKRMRAGPPDEVSFSGSTHASNHFSPDDLPKTVLRNLSQGSNVMSMDFHPQQ 1207
            Q+ADSEH++KRMR G PDEVSFSG++H  N +S +DLPK V+R L+QGSNVMS+DFHP Q
Sbjct: 297  QSADSEHLMKRMRVGQPDEVSFSGASHPPNAYSQEDLPKQVVRTLNQGSNVMSLDFHPVQ 356

Query: 1208 PTVLLVGTNVGDISIWEVGSRERLVHKTFKMWDISSCSMQLQTTLVKDATISVNRCIWGP 1387
             T+LLVGTNVGDI IWEVGSRER+ HKTFK+WDISSC++ LQ  L+KDA ISVNRC+W P
Sbjct: 357  QTILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISVNRCLWSP 416

Query: 1388 DGSILGAAFSKHIVQIYTHSPAGELRQHLEIDAHVGGVNDIAFAHPNKQLCVVTCGDDKT 1567
            DG+ILG AFSKHIVQ YT  P GELRQ  EIDAH+GGVNDIAF+HPNK L ++TCGDDK 
Sbjct: 417  DGNILGVAFSKHIVQTYTFVPNGELRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKL 476

Query: 1568 IKVWDAVSGRRLYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDSLGSRVDYD 1747
            IKVWDA +G++ YTFEGHEAPVYSVCPHYKE+IQFIFSTAIDGKIKAWLYD LGSRVDYD
Sbjct: 477  IKVWDAQTGQKQYTFEGHEAPVYSVCPHYKENIQFIFSTAIDGKIKAWLYDCLGSRVDYD 536

Query: 1748 APGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIRRTYSGFRKRSMGVVQFDT 1927
            APG WCTTM+YSADGTRLFSCGTSK+G+SHLVEWNE+EGAI+RTY+GFRKRS+GVVQFDT
Sbjct: 537  APGHWCTTMSYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDT 596

Query: 1928 TRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLKFNKEGSLLAVTTSENGIKI 2107
            TRN FLAAGDEF +KFWDMDN N+LT A+ DGGLPASPRL+FN+EGSLLAVT ++NGIKI
Sbjct: 597  TRNHFLAAGDEFVVKFWDMDNTNILTTAECDGGLPASPRLRFNREGSLLAVTANDNGIKI 656

Query: 2108 LANTDGQRMIRMVESRALEGSRGISEAVNVKPPVTGPLGLTANTSTPLVPMLERADRTQQ 2287
            LANTDGQR++RM+ESRA EGSRG  + +N KPP+   LG  +N S+P+    ER DR   
Sbjct: 657  LANTDGQRLLRMLESRAFEGSRG-PQQINTKPPLINTLGSASNVSSPIAVNSERPDRMLP 715

Query: 2288 SISIGNLATTESSRVVDVKPRIADHMDRVKTWKYPDIADPTHLKTLRLPDTLT-ASKVVR 2464
            ++S+  LA  + SR  DVKPRI D  +++KTWK  DI D  H++  R PDT +  SKVVR
Sbjct: 716  AVSMSGLAPMDVSRTQDVKPRITDEAEKMKTWKLSDIVDSGHIRARRCPDTASNPSKVVR 775

Query: 2465 LLYTNSGXXXXXXXXXXXHKLWKWQRNERNPSGKSSASTVPQLWQPPNGALMSNDVNDSK 2644
            LLYTN+G           HKLWKWQR++RNP+GKS+AS  P LWQPPNG LM+ND +D  
Sbjct: 776  LLYTNNGIALLSLCSNAGHKLWKWQRSDRNPTGKSTASISPHLWQPPNGILMTNDTSDGN 835

Query: 2645 PAEDSVSCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMXXXXXXTYLAFHPQDNNII 2824
            P E++ +CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFM      T+LAFHPQDNNII
Sbjct: 836  P-EEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNII 894

Query: 2825 AIGMEDSTIQIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGADAQLCVWSIDGWE 3004
            AIGMEDSTIQIYNVRVDEVK+KLKGHQK+ITGLAFSQS+NVLVSSGADAQLCVWSIDGWE
Sbjct: 895  AIGMEDSTIQIYNVRVDEVKSKLKGHQKKITGLAFSQSMNVLVSSGADAQLCVWSIDGWE 954

Query: 3005 KKRTRPIQAPPGVSSPLVGATRVQFHNDQSRVLVVHESQIALYDTQLECLHSWYPRDSLS 3184
            KK++R IQ P   S  LVG TRVQFHNDQ+ VLVVHESQ+A+YD +LEC  SWYPRD+L 
Sbjct: 955  KKKSRYIQPPANHSGALVGDTRVQFHNDQTHVLVVHESQLAIYDGKLECSRSWYPRDALP 1014

Query: 3185 AGISSAIYSCDGMLVVTGFSDGAVGIFDVENLRLRCRIAPSAYLPSSIASNNGSSFPVVI 3364
            A +SSAIYSCDG+L+  GF DGA+G+F+ E+LRLRCRIA SAY+P S+ S  GS +P+VI
Sbjct: 1015 APVSSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIALSAYIPPSMPS-GGSVYPMVI 1073

Query: 3365 AAHPSDANQFALGMSDGAVYVVEPSDAEQKWGAFSSQDNGALPSIPSS-SALNGQPSETP 3541
            AAHP + NQ A+GMSDGAV+VVEP D + KWG    QDNGA PS+ S+ +A N Q S+ P
Sbjct: 1074 AAHPLEPNQIAVGMSDGAVHVVEPLDTDTKWGVAPPQDNGAHPSMSSAPAASNNQASDQP 1133

Query: 3542 SR 3547
            +R
Sbjct: 1134 TR 1135


>ref|NP_001167872.2| ramosa 1 enhancer locus 2 [Zea mays] gi|303387473|gb|ADM15670.1|
            ramosa 1 enhancer locus 2 [Zea mays]
            gi|303387475|gb|ADM15671.1| ramosa 1 enhancer locus 2
            [Zea mays] gi|413917313|gb|AFW57245.1| ramosa1 enhancer
            locus2 [Zea mays]
          Length = 1141

 Score = 1703 bits (4410), Expect = 0.0
 Identities = 837/1147 (72%), Positives = 954/1147 (83%), Gaps = 8/1147 (0%)
 Frame = +2

Query: 131  MSSLSRELVFLILQFLDEEKFKDTVHKLEQESGFYFNMKYFEDQVQAGEWEEVERYLSGF 310
            MSSLSRELVFLILQFLDEEKFK+TVHKLEQESGFYFNMK+FED VQ GEW+EVE+YLSGF
Sbjct: 1    MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFYFNMKHFEDLVQGGEWDEVEKYLSGF 60

Query: 311  TKVEDNRYSMKIFFEIRKQKYLEALDRNDRPKAVEFLVKDLKVFASFNEDLFKEITQLLT 490
            TKVEDNRYSMKIFFEIRKQKYLEALDR+DR KAVE LVKDLKVFASFNE+LFKEITQLLT
Sbjct: 61   TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120

Query: 491  LDNFRQNEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLTLPAFRASRLRTLINQSLN 670
            L+NFRQNEQLSKYGDTKSAR+IML+ELKKLIEANPLFRDKL  P F+ASRLRTLINQSLN
Sbjct: 121  LENFRQNEQLSKYGDTKSARNIMLLELKKLIEANPLFRDKLNFPPFKASRLRTLINQSLN 180

Query: 671  WQHQLCKNPRPNPDIKTLFTDHSCSS-SNGTRAATPTNNPLAGSIPKPGVFPPLGVHGLQ 847
            WQHQLCKNPRPNPDIKTLFTDHSC++ +NG RA  P N PL GSIPK   FPP+G H   
Sbjct: 181  WQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANGPL-GSIPKSAGFPPMGAHA-- 237

Query: 848  PFQXXXXXXXXAIAGWMSSANPSMPHGVVAGPPPGLVQAPGAASFLKHPRTPQGPLGMDY 1027
            PFQ        AIAGWM++ANPS+PH  VA  PPGLVQAP  A+FLKHPRTP    G+DY
Sbjct: 238  PFQPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQAPNTAAFLKHPRTPTSAPGIDY 297

Query: 1028 QTADSEHMIKRMRAGPPDEVSFSGSTHASNHFSPDDLPKTVLRNLSQGSNVMSMDFHPQQ 1207
            Q+ADSEH++KRMR G PDEVSFSG++H +N ++ +DLPK V R L+QGSNVMS+DFHP Q
Sbjct: 298  QSADSEHLMKRMRVGQPDEVSFSGASHPANMYTQEDLPKQVSRTLNQGSNVMSLDFHPVQ 357

Query: 1208 PTVLLVGTNVGDISIWEVGSRERLVHKTFKMWDISSCSMQLQTTLVKDATISVNRCIWGP 1387
             T+LLVGTNVGDI++WEVGSRER+ HKTFK+WDI SC++ LQ +L+KDA +SVNRC+W P
Sbjct: 358  QTILLVGTNVGDIAVWEVGSRERIAHKTFKVWDIGSCTLPLQASLMKDAAVSVNRCLWSP 417

Query: 1388 DGSILGAAFSKHIVQIYTHSPAGELRQHLEIDAHVGGVNDIAFAHPNKQLCVVTCGDDKT 1567
            DG+ILG AFSKHIVQ YT  P G+LRQ  EIDAH+GGVNDIAF+HPNK L ++TCGDDK 
Sbjct: 418  DGTILGVAFSKHIVQTYTFVPNGDLRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKL 477

Query: 1568 IKVWDAVSGRRLYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDSLGSRVDYD 1747
            IKVWDA +G++ YTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYD LGSRVDYD
Sbjct: 478  IKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYD 537

Query: 1748 APGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIRRTYSGFRKRSMGVVQFDT 1927
            APG WCTTMAYSADGTRLFSCGTSKEG+SHLVEWNE+EGAI+RTY+GFRKRS+GVVQFDT
Sbjct: 538  APGHWCTTMAYSADGTRLFSCGTSKEGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDT 597

Query: 1928 TRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLKFNKEGSLLAVTTSENGIKI 2107
            TRNRFLAAGDEF +KFWDMDN N+LT  D DGGLPASPRL+FN+EGSLLAVTTS+NGIKI
Sbjct: 598  TRNRFLAAGDEFLVKFWDMDNNNILTTTDCDGGLPASPRLRFNREGSLLAVTTSDNGIKI 657

Query: 2108 LANTDGQRMIRMVESRALEGSRGISEAVNVKPPVTGPLGLTANTSTPLVPMLERADRTQQ 2287
            LANTDGQR++RM+ESRA EGSRG  + +N KPP+   LG  +N S+P+    ER DR   
Sbjct: 658  LANTDGQRLLRMLESRAFEGSRGPPQQINTKPPIVA-LGPVSNVSSPIAVNAERPDRILP 716

Query: 2288 SISIGNLATTESSRVVDVKPRIADHMDRVKTWKYPDIADPTHLKTLRLPDTLT-ASKVVR 2464
            ++S   LA  ++SR  DVKPRI D  ++VKTWK  DI D  HL+ L L DT T  SK+VR
Sbjct: 717  AVSTSGLAPMDASRTPDVKPRITDESEKVKTWKLADIVDNGHLRALHLTDTDTNPSKIVR 776

Query: 2465 LLYTNSGXXXXXXXXXXXHKLWKWQRNERNPSGKSSASTVPQLWQPPNGALMSNDVNDSK 2644
            LLYTN+G           HKLWKWQR++RNPSGKS+AS  P LWQP NG LM+ND ND  
Sbjct: 777  LLYTNNGVALLALGSNAVHKLWKWQRSDRNPSGKSTASVAPHLWQPANGILMTNDTNDGN 836

Query: 2645 PAEDSVSCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMXXXXXXTYLAFHPQDNNII 2824
            P E++ +CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFM      T+LAFHPQDNNII
Sbjct: 837  P-EEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNII 895

Query: 2825 AIGMEDSTIQIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGADAQLCVWSIDGWE 3004
            AIGMEDSTIQIYNVR+D+VK+KLKGHQK+ITGLAFSQS+NVLVSSGADAQLCVWSIDGWE
Sbjct: 896  AIGMEDSTIQIYNVRIDDVKSKLKGHQKKITGLAFSQSMNVLVSSGADAQLCVWSIDGWE 955

Query: 3005 KKRTRPIQAPPGVSSPLVGATRVQFHNDQSRVLVVHESQIALYDTQLECLHSWYPRDSLS 3184
            KK++R IQ P      LVG TRVQFHNDQ+ +LVVHESQ+ +YD  L+CL  W PRD+L 
Sbjct: 956  KKKSRYIQPPANRPGTLVGDTRVQFHNDQTHLLVVHESQLGIYDGNLDCLRLWSPRDALP 1015

Query: 3185 AGISSAIYSCDGMLVVTGFSDGAVGIFDVENLRLRCRIAPSAYLPSSIASNNGSSFPVVI 3364
            A ISSAIYSCDG+LV  GF DGA+G+F+ E+LRLRCRIAPSAY+P SI +  G  +P+V+
Sbjct: 1016 APISSAIYSCDGLLVYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSILACAGRVYPLVV 1075

Query: 3365 AAHPSDANQFALGMSDGAVYVVEPSDAEQKWGAFSSQDNGALP------SIPSSSALNGQ 3526
            AAHP + NQ A+GMSDG V+VVEP D + KWG+   QDNGA P      S   S+A N Q
Sbjct: 1076 AAHPMEPNQIAIGMSDGKVHVVEPLDGDPKWGSAPPQDNGAHPHPHPAISAAPSTATN-Q 1134

Query: 3527 PSETPSR 3547
             S+ P+R
Sbjct: 1135 ASDQPTR 1141