BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000005
         (2491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...   918   0.0  
ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...   905   0.0  
ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|2...   878   0.0  
ref|XP_002443908.1| hypothetical protein SORBIDRAFT_07g004180 [S...   877   0.0  
ref|NP_001167872.2| ramosa 1 enhancer locus 2 [Zea mays] gi|3033...   873   0.0  

>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
            gi|297737353|emb|CBI26554.3| unnamed protein product
            [Vitis vinifera]
          Length = 1135

 Score =  918 bits (2373), Expect(2) = 0.0
 Identities = 440/565 (77%), Positives = 485/565 (85%), Gaps = 3/565 (0%)
 Frame = -3

Query: 2489 KLTLPAFRASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHSCSSTNGTRAATPTNNP 2310
            KLT PAF+ASRLRTLINQSLNWQHQLCKNPR NPDIKTLF DH+C+ TNG R   PTNNP
Sbjct: 160  KLTFPAFKASRLRTLINQSLNWQHQLCKNPRSNPDIKTLFTDHACTPTNGARPPPPTNNP 219

Query: 2309 LSGSIPKPGVFTPLGAHGPFQPVVSPSPSAIAGWMSSANASMPHGAVATPPPGLVQAPGA 2130
            L G IPK G F P+GAH PFQPVVSPSP AIAGWMSS N S+PH AVA  PP LVQ   A
Sbjct: 220  LVGPIPKAGAFPPIGAHNPFQPVVSPSPGAIAGWMSSTNPSLPHAAVAAGPPSLVQPSTA 279

Query: 2129 AAFLKHPRTPPGAIGMEYQTADSEHMMKRMRAGPPDEVSFSVSTHASNS-SPDDLPKTVV 1953
            AAFLKH RTP G  GM+YQ+ DSEH+MKR+R G  DEVSFS   HA N  S DDLPK+VV
Sbjct: 280  AAFLKHQRTPTGVTGMDYQSGDSEHLMKRIRTGQSDEVSFSGVAHAPNVYSQDDLPKSVV 339

Query: 1952 RNLSQGSNVMSMDFHPQQPTILLVGTNVGDISIWEIGSRERLVHKTFKVWDMSTCSMQLQ 1773
            R ++QGSNVMSMDFHPQQ T+LLVGTNVGDIS+WE+GSRERL HK FKVWD+S CSM LQ
Sbjct: 340  RTITQGSNVMSMDFHPQQQTVLLVGTNVGDISLWEVGSRERLAHKPFKVWDISACSMPLQ 399

Query: 1772 SIFVKDATISVNRCIWGPDGSILGIAFSKHIVQIYTHSPAGELRQHLEIDAHIGGVNDIA 1593
            +  +KDATISVNRC+WGPDG ILG+AFSKHIVQIYT++P GELRQHLEIDAHIGGVND+A
Sbjct: 400  TALLKDATISVNRCVWGPDGLILGVAFSKHIVQIYTYNPTGELRQHLEIDAHIGGVNDVA 459

Query: 1592 FAHPNKQLCIVTCGDDKTIKVWDAVSGRRLYTFEGHDAPVYAVCPHYKESIQFIFSTAID 1413
            FAHPNKQLCIVTCGDDKTIKVWDA +GRRLYTFEGH+APVY+VCPHYKE+IQFIFSTAID
Sbjct: 460  FAHPNKQLCIVTCGDDKTIKVWDAQTGRRLYTFEGHEAPVYSVCPHYKENIQFIFSTAID 519

Query: 1412 GKIKAWLYDSFGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIR 1233
            GKIKAWLYD  GSRVDYDAPGHWCT MAYSADGTRLFSCGTSK+GESHLVEWNESEGAI+
Sbjct: 520  GKIKAWLYDCLGSRVDYDAPGHWCTMMAYSADGTRLFSCGTSKDGESHLVEWNESEGAIK 579

Query: 1232 RTYSGFRKRSVGVVQFDTTRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLKF 1053
            RTY GFRKRS+GVVQFDTTRNRFLAAGDEFQIKFWDMDN N+LT  +A+GGLPASPRL+F
Sbjct: 580  RTYLGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNTNILTAVEAEGGLPASPRLRF 639

Query: 1052 NKEGSLLAVTTSDNGIKILANTDGQRMIRMIESRALEGSRGISEP--AKPPVTGSLLPVA 879
            NKEGSLLAVTT+DNGIKILAN DG R+ RM+ESR +EG RG SEP  +KP +  +L P A
Sbjct: 640  NKEGSLLAVTTNDNGIKILANNDGLRLTRMLESRPMEGHRGPSEPINSKPLIVNALGPAA 699

Query: 878  STSTPHGPMLERADRIHQPISIGNV 804
            + S    P LER+DRI   +SI N+
Sbjct: 700  NVSAAMSPSLERSDRIQPAVSINNL 724



 Score =  397 bits (1021), Expect(2) = 0.0
 Identities = 190/244 (77%), Positives = 216/244 (88%)
 Frame = -2

Query: 732  ATTDSSRAVDVKPRISDHMDRVKTWKFPDIADPNQLNTLRLPDTLTASKVVRLLYTNSGL 553
            AT DSSR VDVKP+ISD ++++K+WK PDI D +QL  LRLPD +T  KVVRL+YTNSGL
Sbjct: 725  ATMDSSRLVDVKPKISDDLEKIKSWKIPDIVDQSQLKALRLPDPVTTGKVVRLIYTNSGL 784

Query: 552  AILALAANAVHKLWKWQRNDRNPSGKSSASTVPQLWQPPNGALMSNDMNDTKPVEESASC 373
            A+LAL +NAVHKLWKWQR++RNP GKS+A  VPQLWQP NG LM+ND  D  P EESA+C
Sbjct: 785  ALLALISNAVHKLWKWQRSERNPLGKSTAYVVPQLWQPANGTLMTNDTGDNNPPEESAAC 844

Query: 372  IALSKNDSYVMSASGGKVSLFNMMTFKVMTTFIPPPPAATYLAFHPQDNNIIAIGMEDST 193
            IALSKNDSYVMSASGGKVSLFNMMTFKVMTTF+ PPPAAT+LAFHPQDNNIIAIGMEDST
Sbjct: 845  IALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNIIAIGMEDST 904

Query: 192  IRIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGSDAQLCVWGIDGWDKKRTRPIQ 13
            I+IYNVRVDEVKTKLKGHQK++TGLAFSQ LN LVSSG+DAQLCVW IDGW+K+++R IQ
Sbjct: 905  IQIYNVRVDEVKTKLKGHQKRVTGLAFSQILNCLVSSGADAQLCVWSIDGWEKRKSRFIQ 964

Query: 12   APPG 1
            AP G
Sbjct: 965  APAG 968


>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
            gi|223540775|gb|EEF42335.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1137

 Score =  905 bits (2339), Expect(2) = 0.0
 Identities = 438/567 (77%), Positives = 487/567 (85%), Gaps = 5/567 (0%)
 Frame = -3

Query: 2489 KLTLPAFRASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHSCS--STNGTRAATPTN 2316
            KLT PAF++SRLRTLINQSLNWQHQLCKNPRPNPDIKTLF DHSCS  + NG R   PTN
Sbjct: 160  KLTFPAFKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHSCSPSTANGARPPPPTN 219

Query: 2315 NPLSGSIPKPGVFTPLGAHGPFQPVVSPSPSAIAGWMSSANASMPHGAVATPPPGLVQAP 2136
            +P+ G IPK G F P+GAHGPFQPVVSPSP AIAGWMSS N S+PH AVA  PPGLVQ  
Sbjct: 220  SPIVGPIPKAGAFPPIGAHGPFQPVVSPSPGAIAGWMSSNNPSLPHPAVAAGPPGLVQPS 279

Query: 2135 GAAAFLKHPRTPPGAIGMEYQTADSEHMMKRMRAGPPDEVSFSVSTHASNS-SPDDLPKT 1959
             AAAFLKHPRTP G  G++YQ+ADSEH+MKRMR G  DEVSFS   H  N  SPDDLPKT
Sbjct: 280  SAAAFLKHPRTPTGMTGIDYQSADSEHLMKRMRTGQSDEVSFSGVAHTPNVYSPDDLPKT 339

Query: 1958 VVRNLSQGSNVMSMDFHPQQPTILLVGTNVGDISIWEIGSRERLVHKTFKVWDMSTCSMQ 1779
            V+R+LSQGSNVMSMDFHPQQ TILLVGTNVGDIS+WE+GSRERL HK FKVWD+S  SM 
Sbjct: 340  VMRSLSQGSNVMSMDFHPQQQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDLSAASMP 399

Query: 1778 LQSIFVKDATISVNRCIWGPDGSILGIAFSKHIVQIYTHSPAGELRQHLEIDAHIGGVND 1599
            LQ+  + DA ISVNRC+WGPDG +LG+AFSKHIVQ+Y ++P GELRQHLEIDAH+GGVND
Sbjct: 400  LQAALLNDAAISVNRCVWGPDGLMLGVAFSKHIVQLYAYNPTGELRQHLEIDAHVGGVND 459

Query: 1598 IAFAHPNKQLCIVTCGDDKTIKVWDAVSGRRLYTFEGHDAPVYAVCPHYKESIQFIFSTA 1419
            IAFAHPNKQLCIVTCGDDK IKVWDAV+GRR YTFEGH+APVY+VCPHYKE+IQFIFSTA
Sbjct: 460  IAFAHPNKQLCIVTCGDDKMIKVWDAVAGRRQYTFEGHEAPVYSVCPHYKENIQFIFSTA 519

Query: 1418 IDGKIKAWLYDSFGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGA 1239
            IDGKIKAWLYDS GSRVDYDAPG WCT MAYSADG+RLFSCGTSKEGESHLVEWNESEG 
Sbjct: 520  IDGKIKAWLYDSLGSRVDYDAPGLWCTMMAYSADGSRLFSCGTSKEGESHLVEWNESEGT 579

Query: 1238 IRRTYSGFRKRSVGVVQFDTTRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRL 1059
            I+RTYSGFRKRS GVVQFDTTR+RFLAAGDEFQIKFWDMDN NMLT  DADGGLPASPRL
Sbjct: 580  IKRTYSGFRKRSSGVVQFDTTRSRFLAAGDEFQIKFWDMDNTNMLTAVDADGGLPASPRL 639

Query: 1058 KFNKEGSLLAVTTSDNGIKILANTDGQRMIRMIESRALEGSRGISEP--AKPPVTGSLLP 885
            +FNKEGSLLAVTTSDNGIKILAN+DG R+IRM+ESRA++ +R  SEP  +KP +  +L P
Sbjct: 640  RFNKEGSLLAVTTSDNGIKILANSDGLRLIRMLESRAIDKNRSPSEPINSKPLIVNALGP 699

Query: 884  VASTSTPHGPMLERADRIHQPISIGNV 804
            VA+ S+     LER DR+   ++I ++
Sbjct: 700  VANVSSGLATALERVDRMPPAVAISSL 726



 Score =  408 bits (1049), Expect(2) = 0.0
 Identities = 192/243 (79%), Positives = 222/243 (91%)
 Frame = -2

Query: 729  TTDSSRAVDVKPRISDHMDRVKTWKFPDIADPNQLNTLRLPDTLTASKVVRLLYTNSGLA 550
            T DSSR VDVKPRISD +D++K+WK PDI D + L  LRLPD++   KVVRL+YTNSGLA
Sbjct: 728  TMDSSRLVDVKPRISDELDKIKSWKIPDIVDQSHLKALRLPDSIATGKVVRLIYTNSGLA 787

Query: 549  ILALAANAVHKLWKWQRNDRNPSGKSSASTVPQLWQPPNGALMSNDMNDTKPVEESASCI 370
            +LALA+NAVHKLWKWQR++RNPSGK++A   PQLWQPP+G LM+ND++D+KP EESA+CI
Sbjct: 788  LLALASNAVHKLWKWQRSERNPSGKATAYVAPQLWQPPSGTLMTNDISDSKPAEESAACI 847

Query: 369  ALSKNDSYVMSASGGKVSLFNMMTFKVMTTFIPPPPAATYLAFHPQDNNIIAIGMEDSTI 190
            ALSKNDSYVMSASGGKVSLFNMMTFKVMTTF+ PPPAAT+LAFHPQDNNIIAIGMEDS++
Sbjct: 848  ALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNIIAIGMEDSSV 907

Query: 189  RIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGSDAQLCVWGIDGWDKKRTRPIQA 10
            +IYNVRVDEVKTKLKGHQ +ITGLAFSQSLNVLVSSG+DAQLCVW IDGW+KK++R IQA
Sbjct: 908  QIYNVRVDEVKTKLKGHQNRITGLAFSQSLNVLVSSGADAQLCVWSIDGWEKKKSRFIQA 967

Query: 9    PPG 1
            PPG
Sbjct: 968  PPG 970


>ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|222839220|gb|EEE77571.1|
            predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  878 bits (2268), Expect(2) = 0.0
 Identities = 429/567 (75%), Positives = 476/567 (83%), Gaps = 5/567 (0%)
 Frame = -3

Query: 2489 KLTLPAFRASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHSCSST--NGTRAATPTN 2316
            KLT P F++SRLRTLINQSLNWQHQLCKNPR NPDIKTLFIDHSC+ T  NG     P+N
Sbjct: 160  KLTFPPFKSSRLRTLINQSLNWQHQLCKNPRSNPDIKTLFIDHSCTPTTANGAHPPPPSN 219

Query: 2315 NPLSGSIPKPGVFTPLGAHGPFQPVVSPSPSAIAGWMSSANASMPHGAVATPPPGLVQAP 2136
             PL G IPK G F P+GAHGPFQPVVSP+P AIAGWMS+ N S+PH AVA  PP LVQ  
Sbjct: 220  TPLVGPIPKAGAFPPIGAHGPFQPVVSPTPGAIAGWMSANNPSLPHPAVAAGPPTLVQPS 279

Query: 2135 GAAAFLKHPRTPPGAIGMEYQTADSEHMMKRMRAGPPDEVSFSVSTHASNS-SPDDLPKT 1959
             AAAFLKHPRTP G  GM YQ+ADSEH+MKRMR G  +EVSFS   H  N  S DDLPKT
Sbjct: 280  SAAAFLKHPRTPTGMTGMNYQSADSEHLMKRMRPGQSEEVSFSGIAHTPNIYSQDDLPKT 339

Query: 1958 VVRNLSQGSNVMSMDFHPQQPTILLVGTNVGDISIWEIGSRERLVHKTFKVWDMSTCSMQ 1779
            VVR L+QGSNVMSMDFHPQ  TILLVGTNVGDIS+WE+GSRERL HK FKVWD+S  SM 
Sbjct: 340  VVRTLNQGSNVMSMDFHPQHQTILLVGTNVGDISLWEVGSRERLAHKPFKVWDLSASSMP 399

Query: 1778 LQSIFVKDATISVNRCIWGPDGSILGIAFSKHIVQIYTHSPAGELRQHLEIDAHIGGVND 1599
            LQ+  + DA ISVNRC+WGPDG +LG+AFSKHIVQIYT++P GE RQHLEIDAH+GGVND
Sbjct: 400  LQTALLNDAAISVNRCVWGPDGLMLGVAFSKHIVQIYTYNPTGEPRQHLEIDAHVGGVND 459

Query: 1598 IAFAHPNKQLCIVTCGDDKTIKVWDAVSGRRLYTFEGHDAPVYAVCPHYKESIQFIFSTA 1419
            IAFAHPNKQLCIVTCGDDK IKVWDA +G R Y FEGH+APVY++CPHYKE+IQFIFSTA
Sbjct: 460  IAFAHPNKQLCIVTCGDDKMIKVWDAGAGGRQYIFEGHEAPVYSLCPHYKENIQFIFSTA 519

Query: 1418 IDGKIKAWLYDSFGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGA 1239
            IDGKIKAWLYDS GSRVDYDAPG WCT MAYSADGTRLFSCGTSKEGESHLVEWNESEG+
Sbjct: 520  IDGKIKAWLYDSLGSRVDYDAPGLWCTMMAYSADGTRLFSCGTSKEGESHLVEWNESEGS 579

Query: 1238 IRRTYSGFRKRSVGVVQFDTTRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRL 1059
            I+RTY GFRKRS+ VVQFDTTR+ FLAAGDEFQIKFWDMDN NMLT  DADGGLPASPRL
Sbjct: 580  IKRTYLGFRKRSLDVVQFDTTRSHFLAAGDEFQIKFWDMDNTNMLTAVDADGGLPASPRL 639

Query: 1058 KFNKEGSLLAVTTSDNGIKILANTDGQRMIRMIESRALEGSRGISEP--AKPPVTGSLLP 885
            +FNKEGSLLAVTTSDNGIKILA++DG R+IRM+ESRA++ SR  SEP  +KP +  +L  
Sbjct: 640  RFNKEGSLLAVTTSDNGIKILASSDGLRLIRMLESRAIDKSRSPSEPINSKPLIVNALGS 699

Query: 884  VASTSTPHGPMLERADRIHQPISIGNV 804
            VA+ S+     LER+DRI   +SIGN+
Sbjct: 700  VANVSSGLASSLERSDRIQPAVSIGNL 726



 Score =  314 bits (805), Expect(2) = 0.0
 Identities = 161/242 (66%), Positives = 184/242 (76%)
 Frame = -2

Query: 729  TTDSSRAVDVKPRISDHMDRVKTWKFPDIADPNQLNTLRLPDTLTASKVVRLLYTNSGLA 550
            T D+SR VDVKPRISD  D++K+WK  DI D +QL  LRLPD++ A              
Sbjct: 728  TMDNSRLVDVKPRISDDTDKLKSWK-SDIVDSSQLKALRLPDSIVA-------------- 772

Query: 549  ILALAANAVHKLWKWQRNDRNPSGKSSASTVPQLWQPPNGALMSNDMNDTKPVEESASCI 370
                                   GK++AS  PQLWQPP+G  M+ND+N++KP EESA+CI
Sbjct: 773  -----------------------GKATASNAPQLWQPPSGTPMTNDINESKPAEESAACI 809

Query: 369  ALSKNDSYVMSASGGKVSLFNMMTFKVMTTFIPPPPAATYLAFHPQDNNIIAIGMEDSTI 190
            ALSKNDSYVMSASGGKVSLFNMMTFKVMTTF+ PPPAAT+LAFHPQDNNIIAIGMEDST+
Sbjct: 810  ALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMSPPPAATFLAFHPQDNNIIAIGMEDSTV 869

Query: 189  RIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGSDAQLCVWGIDGWDKKRTRPIQA 10
            +IYNVRVDEVKTKLKGHQ +ITGLAFSQSLNVLVSSG+DAQLCVW IDGW+KK+ R IQA
Sbjct: 870  QIYNVRVDEVKTKLKGHQNRITGLAFSQSLNVLVSSGADAQLCVWSIDGWEKKKMRFIQA 929

Query: 9    PP 4
            PP
Sbjct: 930  PP 931


>ref|XP_002443908.1| hypothetical protein SORBIDRAFT_07g004180 [Sorghum bicolor]
            gi|241940258|gb|EES13403.1| hypothetical protein
            SORBIDRAFT_07g004180 [Sorghum bicolor]
          Length = 1136

 Score =  877 bits (2266), Expect(2) = 0.0
 Identities = 421/562 (74%), Positives = 480/562 (85%), Gaps = 4/562 (0%)
 Frame = -3

Query: 2489 KLTLPAFRASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHSCSS-TNGTRAATPTNN 2313
            KL  P F+ASRLRTLINQSLNWQHQLCKNPRPNPDIKTLF DHSC++ TNG RA  P N 
Sbjct: 158  KLNFPPFKASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANG 217

Query: 2312 PLSGSIPKPGVFTPLGAHGPFQPVVSPSPSAIAGWMSSANASMPHGAVATPPPGLVQAPG 2133
            PL GSIPK   F P+GAH PFQPVVSPSP+AIAGWM++AN S+PH AVA  PPGLVQAP 
Sbjct: 218  PLVGSIPKSAGFPPMGAHAPFQPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQAPN 277

Query: 2132 AAAFLKHPRTPPGAIGMEYQTADSEHMMKRMRAGPPDEVSFSVSTHASNS-SPDDLPKTV 1956
             AAFLKHPRTP  A G++YQ+ADSEH+MKRMR G PDEVSFS ++H +N  + +DLPK V
Sbjct: 278  TAAFLKHPRTPTSAPGIDYQSADSEHLMKRMRVGQPDEVSFSGASHPANMYTQEDLPKQV 337

Query: 1955 VRNLSQGSNVMSMDFHPQQPTILLVGTNVGDISIWEIGSRERLVHKTFKVWDMSTCSMQL 1776
             R L+QGSNVMS+DFHP Q TILLVGTNVGDI++WE+GSRER+ HKTFKVWD+ +C++ L
Sbjct: 338  SRTLNQGSNVMSLDFHPVQQTILLVGTNVGDIAVWEVGSRERIAHKTFKVWDIGSCTLPL 397

Query: 1775 QSIFVKDATISVNRCIWGPDGSILGIAFSKHIVQIYTHSPAGELRQHLEIDAHIGGVNDI 1596
            Q+  +KDA ISVNRC+W PDG+ILG+AFSKHIVQ YT  P G+LRQ  EIDAHIGGVNDI
Sbjct: 398  QASLMKDAAISVNRCLWSPDGTILGVAFSKHIVQTYTFVPNGDLRQQAEIDAHIGGVNDI 457

Query: 1595 AFAHPNKQLCIVTCGDDKTIKVWDAVSGRRLYTFEGHDAPVYAVCPHYKESIQFIFSTAI 1416
            AF+HPNK L I+TCGDDK IKVWDA +G++ YTFEGH+APVY+VCPHYKESIQFIFSTAI
Sbjct: 458  AFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAI 517

Query: 1415 DGKIKAWLYDSFGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAI 1236
            DGKIKAWLYD  GSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEG+SHLVEWNE+EGAI
Sbjct: 518  DGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGDSHLVEWNETEGAI 577

Query: 1235 RRTYSGFRKRSVGVVQFDTTRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLK 1056
            +RTY+GFRKRS+GVVQFDTTRNRFLAAGDEF +KFWDMDN N+LT  D DGGLPASPRL+
Sbjct: 578  KRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFLVKFWDMDNNNILTTTDCDGGLPASPRLR 637

Query: 1055 FNKEGSLLAVTTSDNGIKILANTDGQRMIRMIESRALEGSRGISEP--AKPPVTGSLLPV 882
            FN+EGSLLAVTTSDNGIKILANTDGQR++RM+ESRA EGSRG  +    KPP+  +L PV
Sbjct: 638  FNREGSLLAVTTSDNGIKILANTDGQRLLRMLESRAFEGSRGPPQQINTKPPIV-ALGPV 696

Query: 881  ASTSTPHGPMLERADRIHQPIS 816
            ++ S+P     ER DRI   +S
Sbjct: 697  SNVSSPIAVNAERPDRILPAVS 718



 Score =  373 bits (958), Expect(2) = 0.0
 Identities = 184/243 (75%), Positives = 207/243 (85%), Gaps = 1/243 (0%)
 Frame = -2

Query: 732  ATTDSSRAVDVKPRISDHMDRVKTWKFPDIADPNQLNTLRLPDTLT-ASKVVRLLYTNSG 556
            A  D SR  DVKPRI+D  ++VKTWK  DI D   L  L L DT T  SKVVRLLYTN+G
Sbjct: 723  APMDPSRTPDVKPRITDESEKVKTWKLADIVDNGHLRALHLTDTDTNPSKVVRLLYTNNG 782

Query: 555  LAILALAANAVHKLWKWQRNDRNPSGKSSASTVPQLWQPPNGALMSNDMNDTKPVEESAS 376
            +A+LAL +NAVHKLWKWQR DRNPSGKS+AS  P LWQP NG LM+ND ND  P EE+ +
Sbjct: 783  IALLALGSNAVHKLWKWQRGDRNPSGKSTASVAPHLWQPANGILMTNDTNDGNP-EEATA 841

Query: 375  CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFIPPPPAATYLAFHPQDNNIIAIGMEDS 196
            CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTF+ PPPAAT+LAFHPQDNNIIAIGMEDS
Sbjct: 842  CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDS 901

Query: 195  TIRIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGSDAQLCVWGIDGWDKKRTRPI 16
            TI+IYNVR+D+VK+KLKGHQK+ITGLAFSQS+NVLVSSG+DAQLCVW IDGW+KK++R I
Sbjct: 902  TIQIYNVRIDDVKSKLKGHQKKITGLAFSQSMNVLVSSGADAQLCVWSIDGWEKKKSRYI 961

Query: 15   QAP 7
            Q P
Sbjct: 962  QPP 964


>ref|NP_001167872.2| ramosa 1 enhancer locus 2 [Zea mays] gi|303387473|gb|ADM15670.1|
            ramosa 1 enhancer locus 2 [Zea mays]
            gi|303387475|gb|ADM15671.1| ramosa 1 enhancer locus 2
            [Zea mays] gi|413917313|gb|AFW57245.1| ramosa1 enhancer
            locus2 [Zea mays]
          Length = 1141

 Score =  873 bits (2255), Expect(2) = 0.0
 Identities = 420/562 (74%), Positives = 480/562 (85%), Gaps = 4/562 (0%)
 Frame = -3

Query: 2489 KLTLPAFRASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHSCSS-TNGTRAATPTNN 2313
            KL  P F+ASRLRTLINQSLNWQHQLCKNPRPNPDIKTLF DHSC++ TNG RA  P N 
Sbjct: 160  KLNFPPFKASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANG 219

Query: 2312 PLSGSIPKPGVFTPLGAHGPFQPVVSPSPSAIAGWMSSANASMPHGAVATPPPGLVQAPG 2133
            PL GSIPK   F P+GAH PFQPVVSPSP+AIAGWM++AN S+PH AVA  PPGLVQAP 
Sbjct: 220  PL-GSIPKSAGFPPMGAHAPFQPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQAPN 278

Query: 2132 AAAFLKHPRTPPGAIGMEYQTADSEHMMKRMRAGPPDEVSFSVSTHASNS-SPDDLPKTV 1956
             AAFLKHPRTP  A G++YQ+ADSEH+MKRMR G PDEVSFS ++H +N  + +DLPK V
Sbjct: 279  TAAFLKHPRTPTSAPGIDYQSADSEHLMKRMRVGQPDEVSFSGASHPANMYTQEDLPKQV 338

Query: 1955 VRNLSQGSNVMSMDFHPQQPTILLVGTNVGDISIWEIGSRERLVHKTFKVWDMSTCSMQL 1776
             R L+QGSNVMS+DFHP Q TILLVGTNVGDI++WE+GSRER+ HKTFKVWD+ +C++ L
Sbjct: 339  SRTLNQGSNVMSLDFHPVQQTILLVGTNVGDIAVWEVGSRERIAHKTFKVWDIGSCTLPL 398

Query: 1775 QSIFVKDATISVNRCIWGPDGSILGIAFSKHIVQIYTHSPAGELRQHLEIDAHIGGVNDI 1596
            Q+  +KDA +SVNRC+W PDG+ILG+AFSKHIVQ YT  P G+LRQ  EIDAHIGGVNDI
Sbjct: 399  QASLMKDAAVSVNRCLWSPDGTILGVAFSKHIVQTYTFVPNGDLRQQAEIDAHIGGVNDI 458

Query: 1595 AFAHPNKQLCIVTCGDDKTIKVWDAVSGRRLYTFEGHDAPVYAVCPHYKESIQFIFSTAI 1416
            AF+HPNK L I+TCGDDK IKVWDA +G++ YTFEGH+APVY+VCPHYKESIQFIFSTAI
Sbjct: 459  AFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAI 518

Query: 1415 DGKIKAWLYDSFGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAI 1236
            DGKIKAWLYD  GSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEG+SHLVEWNE+EGAI
Sbjct: 519  DGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKEGDSHLVEWNETEGAI 578

Query: 1235 RRTYSGFRKRSVGVVQFDTTRNRFLAAGDEFQIKFWDMDNINMLTYADADGGLPASPRLK 1056
            +RTY+GFRKRS+GVVQFDTTRNRFLAAGDEF +KFWDMDN N+LT  D DGGLPASPRL+
Sbjct: 579  KRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFLVKFWDMDNNNILTTTDCDGGLPASPRLR 638

Query: 1055 FNKEGSLLAVTTSDNGIKILANTDGQRMIRMIESRALEGSRGISEP--AKPPVTGSLLPV 882
            FN+EGSLLAVTTSDNGIKILANTDGQR++RM+ESRA EGSRG  +    KPP+  +L PV
Sbjct: 639  FNREGSLLAVTTSDNGIKILANTDGQRLLRMLESRAFEGSRGPPQQINTKPPIV-ALGPV 697

Query: 881  ASTSTPHGPMLERADRIHQPIS 816
            ++ S+P     ER DRI   +S
Sbjct: 698  SNVSSPIAVNAERPDRILPAVS 719



 Score =  374 bits (959), Expect(2) = 0.0
 Identities = 183/243 (75%), Positives = 209/243 (86%), Gaps = 1/243 (0%)
 Frame = -2

Query: 732  ATTDSSRAVDVKPRISDHMDRVKTWKFPDIADPNQLNTLRLPDTLT-ASKVVRLLYTNSG 556
            A  D+SR  DVKPRI+D  ++VKTWK  DI D   L  L L DT T  SK+VRLLYTN+G
Sbjct: 724  APMDASRTPDVKPRITDESEKVKTWKLADIVDNGHLRALHLTDTDTNPSKIVRLLYTNNG 783

Query: 555  LAILALAANAVHKLWKWQRNDRNPSGKSSASTVPQLWQPPNGALMSNDMNDTKPVEESAS 376
            +A+LAL +NAVHKLWKWQR+DRNPSGKS+AS  P LWQP NG LM+ND ND  P EE+ +
Sbjct: 784  VALLALGSNAVHKLWKWQRSDRNPSGKSTASVAPHLWQPANGILMTNDTNDGNP-EEATA 842

Query: 375  CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFIPPPPAATYLAFHPQDNNIIAIGMEDS 196
            CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTF+ PPPAAT+LAFHPQDNNIIAIGMEDS
Sbjct: 843  CIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDS 902

Query: 195  TIRIYNVRVDEVKTKLKGHQKQITGLAFSQSLNVLVSSGSDAQLCVWGIDGWDKKRTRPI 16
            TI+IYNVR+D+VK+KLKGHQK+ITGLAFSQS+NVLVSSG+DAQLCVW IDGW+KK++R I
Sbjct: 903  TIQIYNVRIDDVKSKLKGHQKKITGLAFSQSMNVLVSSGADAQLCVWSIDGWEKKKSRYI 962

Query: 15   QAP 7
            Q P
Sbjct: 963  QPP 965