BLASTX nr result

ID: Jatropha_contig00046796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046796
         (555 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricin...    87   2e-15
gb|EEF06319.2| hypothetical protein POPTR_0015s09400g [Populus t...    67   4e-09
ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glyci...    60   3e-07
ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glyci...    60   3e-07
gb|ESR53141.1| hypothetical protein CICLE_v10020048mg [Citrus cl...    60   4e-07
gb|EOY20838.1| Histone deacetylase 6 isoform 1 [Theobroma cacao]       59   1e-06
ref|XP_006347433.1| PREDICTED: histone deacetylase 6-like [Solan...    57   2e-06
ref|XP_004241512.1| PREDICTED: histone deacetylase 6-like [Solan...    57   2e-06
ref|XP_002281317.2| PREDICTED: histone deacetylase 6-like [Vitis...    57   4e-06
emb|CBI14970.3| unnamed protein product [Vitis vinifera]               57   4e-06
ref|XP_004501884.1| PREDICTED: histone deacetylase 6-like [Cicer...    55   8e-06

>ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
           gi|223550452|gb|EEF51939.1| histone deacetylase 1, 2 ,3,
           putative [Ricinus communis]
          Length = 468

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/78 (60%), Positives = 53/78 (67%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             E+MDRRPKRRIW+GE YES PDED + +PRRLN+D   VAKDEM
Sbjct: 393 PFQTTPAITEVPEEGDEEMDRRPKRRIWDGEGYES-PDEDEKPQPRRLNSDG-LVAKDEM 450

Query: 374 RDHSHEMEGDKKEEHP*C 321
           RDH  EME DKK+ HP C
Sbjct: 451 RDHIDEMEEDKKDVHPQC 468


>gb|EEF06319.2| hypothetical protein POPTR_0015s09400g [Populus trichocarpa]
          Length = 467

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 39/76 (51%), Positives = 45/76 (59%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             EDMD+RPKRRIWNGED+ESD DED +  PR  N D  A   +++
Sbjct: 393 PFQTTPPTTEVPEEAEEDMDQRPKRRIWNGEDFESDHDEDEKPGPRFFNAD--AQPNNKI 450

Query: 374 RDHSHEMEGDKKEEHP 327
           RD    ME DKK EHP
Sbjct: 451 RDGVDAMEEDKK-EHP 465


>ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 476

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 34/76 (44%), Positives = 40/76 (52%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             EDMDRRPK R W+GEDY+SDPDE G+   +  N          M
Sbjct: 403 PFQTTPPTLQLPEEAEEDMDRRPKLRKWDGEDYDSDPDEGGKANSKFPN------VTAHM 456

Query: 374 RDHSHEMEGDKKEEHP 327
           RD + EME +K E HP
Sbjct: 457 RDITDEMEEEKPEVHP 472


>ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 472

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/76 (43%), Positives = 42/76 (55%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             E+MDRRPK R W+GEDY+SDP+E G+      +N   +     M
Sbjct: 399 PFQTTPPTLQLPEEAEENMDRRPKLRKWDGEDYDSDPEEGGK------DNSKFSNITAHM 452

Query: 374 RDHSHEMEGDKKEEHP 327
           RD + EME +K EEHP
Sbjct: 453 RDIADEMEEEKPEEHP 468


>gb|ESR53141.1| hypothetical protein CICLE_v10020048mg [Citrus clementina]
          Length = 465

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 41/76 (53%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             EDM+RRPK RIWNGEDYESD DED +  P   N D        M
Sbjct: 392 PFQTTPATTQVPEEPEEDMERRPKPRIWNGEDYESDHDED-DRPPHMTNFDDHM-----M 445

Query: 374 RDHSHEMEGDKKEEHP 327
           RD + +M+ +K + HP
Sbjct: 446 RDGADDMDEEKSDGHP 461


>gb|EOY20838.1| Histone deacetylase 6 isoform 1 [Theobroma cacao]
          Length = 470

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKD-E 378
           PFQ             EDMD+RPK RIWNG+DYESDP++D +   R  ++D++    D E
Sbjct: 392 PFQTTPSTIQAPEEAEEDMDKRPKPRIWNGDDYESDPEDDEKTLCRFSSSDAKQTTTDAE 451

Query: 377 MRDHSHEMEGDKKEEHP 327
           MRD   +++  + E  P
Sbjct: 452 MRDVPEDLKEVQAEGQP 468


>ref|XP_006347433.1| PREDICTED: histone deacetylase 6-like [Solanum tuberosum]
          Length = 471

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             E+MDRRPK RIWNG+ YESD DED + R R  +++   V   +M
Sbjct: 395 PFQTTPSTTEVPEEKEENMDRRPKPRIWNGDGYESDADEDEKPRQRSSDSNLTPVESSDM 454

Query: 374 RDHSHEMEGDKK-EEHP 327
           RD   +   D   ++HP
Sbjct: 455 RDVDDQANADDMVDDHP 471


>ref|XP_004241512.1| PREDICTED: histone deacetylase 6-like [Solanum lycopersicum]
          Length = 471

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             E+MDRRPK RIWNG+ YESD DED + R R  +++   V   +M
Sbjct: 395 PFQTTPSTTEVPEEKEENMDRRPKPRIWNGDGYESDADEDEKPRQRSSDSNLTPVESSDM 454

Query: 374 RDHSHEMEGDKK-EEHP 327
           RD   +   D   ++HP
Sbjct: 455 RDVDDQANADDMVDDHP 471


>ref|XP_002281317.2| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 452

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             EDMD+RPK RIWNGED ESDPDED + R +  N +    +  EM
Sbjct: 380 PFQTTPPITKVPEEEEEDMDKRPKPRIWNGEDCESDPDEDEKPRAQFSNTNHHPTSNVEM 439

Query: 374 RDHSHEMEGDK 342
           R  + +++ +K
Sbjct: 440 RGVTGKIKEEK 450


>emb|CBI14970.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/71 (42%), Positives = 40/71 (56%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             EDMD+RPK RIWNGED ESDPDED + R +  N +    +  EM
Sbjct: 293 PFQTTPPITKVPEEEEEDMDKRPKPRIWNGEDCESDPDEDEKPRAQFSNTNHHPTSNVEM 352

Query: 374 RDHSHEMEGDK 342
           R  + +++ +K
Sbjct: 353 RGVTGKIKEEK 363


>ref|XP_004501884.1| PREDICTED: histone deacetylase 6-like [Cicer arietinum]
          Length = 477

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/76 (42%), Positives = 39/76 (51%)
 Frame = -2

Query: 554 PFQXXXXXXXXXXXXXEDMDRRPKRRIWNGEDYESDPDEDGELRPRRLNNDSRAVAKDEM 375
           PFQ             EDMD RPKRR+W+GEDY+SDPDED +   +       +     M
Sbjct: 402 PFQTTPSTTQVPEEEEEDMDIRPKRRMWSGEDYDSDPDEDDKAGVK------NSTLTAHM 455

Query: 374 RDHSHEMEGDKKEEHP 327
           R  + EME DK E  P
Sbjct: 456 RCTADEMEEDKPEVKP 471


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