BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046752
         (911 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   223   1e-61
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   4e-55
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   4e-55
gb|EEE82537.2| DNA-directed RNA polymerase family protein [Popul...   199   6e-54
ref|XP_002297732.1| predicted protein [Populus trichocarpa]           199   6e-54
gb|ESR41366.1| hypothetical protein CICLE_v10024768mg [Citrus cl...   187   8e-51
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   189   2e-50
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              189   2e-50
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   185   9e-50
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus...   184   1e-49
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   182   4e-49
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   184   3e-48
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   183   3e-48
gb|ESQ33885.1| hypothetical protein EUTSA_v10006599mg [Eutrema s...   179   1e-46
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   175   1e-46
gb|ESQ33886.1| hypothetical protein EUTSA_v10006600mg [Eutrema s...   177   7e-46
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA...   117   3e-45
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...   168   8e-45
gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   168   8e-45
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...   167   5e-43

>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  223 bits (568), Expect(2) = 1e-61
 Identities = 129/224 (57%), Positives = 150/224 (66%), Gaps = 9/224 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER M HGQIYQTETIDLSEEGS+S RAQ+MFRRSNID+S HS I S
Sbjct: 751  YDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDS 810

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQMIHPNEPYC+IY+E+TNTT+TNNRKGSDPV VDYVA+DTKNK ++QKVNIRF
Sbjct: 811  DGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHLQKVNIRF 870

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 871  RHPRNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 920

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASGGD 802
               MT+  L +SLAAKGG +  + + DATPF   SS    +GG+
Sbjct: 921  PSRMTIAMLLESLAAKGGSLNGKFV-DATPF--TSSVKNVNGGE 961



 Score = 41.2 bits (95), Expect(2) = 1e-61
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +3

Query: 9   SRPRY*LDEYPTGTNAIFAVLAYTG 83
           S  +Y +DEYPTGTNAI AVLAYTG
Sbjct: 726 SYTKYCVDEYPTGTNAIVAVLAYTG 750


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  201 bits (511), Expect(2) = 4e-55
 Identities = 120/224 (53%), Positives = 143/224 (63%), Gaps = 9/224 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER MFHGQIYQTETIDLS++G++S+R+QKMFRRSNID S  S I +
Sbjct: 766  YDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDA 825

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQMI P+EPYC+IYDEV  TT+T   KGS+ V VDYV+VD KNKNN QKVNIRF
Sbjct: 826  DGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRF 885

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 886  RRPRNP----------MIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAF 935

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASGGD 802
               MT+  L +S+AAKGG +  E + +ATPF   SS NK + GD
Sbjct: 936  PSRMTIAMLMESVAAKGGCLNGEFV-NATPF--RSSVNKTNAGD 976



 Score = 41.2 bits (95), Expect(2) = 4e-55
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DEYPTGTNAI AVLAYTG
Sbjct: 744 KYNIDEYPTGTNAIVAVLAYTG 765


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 719

 Score =  201 bits (511), Expect(2) = 4e-55
 Identities = 120/224 (53%), Positives = 143/224 (63%), Gaps = 9/224 (4%)
 Frame = +2

Query: 158 YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
           YDMEDAMILNKSSVER MFHGQIYQTETIDLS++G++S+R+QKMFRRSNID S  S I +
Sbjct: 312 YDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDA 371

Query: 338 HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
            GLPY+GQMI P+EPYC+IYDEV  TT+T   KGS+ V VDYV+VD KNKNN QKVNIRF
Sbjct: 372 DGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRF 431

Query: 518 STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 432 RRPRNP----------MIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAF 481

Query: 671 HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASGGD 802
              MT+  L +S+AAKGG +  E + +ATPF   SS NK + GD
Sbjct: 482 PSRMTIAMLMESVAAKGGCLNGEFV-NATPF--RSSVNKTNAGD 522



 Score = 41.2 bits (95), Expect(2) = 4e-55
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DEYPTGTNAI AVLAYTG
Sbjct: 290 KYNIDEYPTGTNAIVAVLAYTG 311


>gb|EEE82537.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
          Length = 1117

 Score =  199 bits (506), Expect(2) = 6e-54
 Identities = 115/213 (53%), Positives = 138/213 (64%), Gaps = 9/213 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSV+R MFHGQIYQTETIDLS+EGS+S R+ + FRRSN DRS HS I S
Sbjct: 712  YDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDEGSRSDRSHRRFRRSNTDRSSHSLIDS 771

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQ+I+PNEPYC+IY+++TNT+K   RKGS+P  VDYVAVDTK+K ++QKVNIRF
Sbjct: 772  DGLPYVGQIINPNEPYCSIYNDITNTSKPKYRKGSEPAIVDYVAVDTKSKKHLQKVNIRF 831

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 832  RHPRNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 881

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLS 769
               MT+  L +SLAAKGG +   N  DATPF S
Sbjct: 882  PSRMTIAMLLESLAAKGGSLN-GNFVDATPFAS 913



 Score = 39.3 bits (90), Expect(2) = 6e-54
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAYTG
Sbjct: 690 KYSIDEHPTGTNAIVAVLAYTG 711


>ref|XP_002297732.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  199 bits (506), Expect(2) = 6e-54
 Identities = 115/213 (53%), Positives = 138/213 (64%), Gaps = 9/213 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSV+R MFHGQIYQTETIDLS+EGS+S R+ + FRRSN DRS HS I S
Sbjct: 706  YDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDEGSRSDRSHRRFRRSNTDRSSHSLIDS 765

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQ+I+PNEPYC+IY+++TNT+K   RKGS+P  VDYVAVDTK+K ++QKVNIRF
Sbjct: 766  DGLPYVGQIINPNEPYCSIYNDITNTSKPKYRKGSEPAIVDYVAVDTKSKKHLQKVNIRF 825

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 826  RHPRNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 875

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLS 769
               MT+  L +SLAAKGG +   N  DATPF S
Sbjct: 876  PSRMTIAMLLESLAAKGGSLN-GNFVDATPFAS 907



 Score = 39.3 bits (90), Expect(2) = 6e-54
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAYTG
Sbjct: 684 KYSIDEHPTGTNAIVAVLAYTG 705


>gb|ESR41366.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  187 bits (474), Expect(2) = 8e-51
 Identities = 113/226 (50%), Positives = 140/226 (61%), Gaps = 10/226 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSV+R M HGQIYQTETIDLS++G+K  R QK+FRR+   +S HS I S
Sbjct: 673  YDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDS 732

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNI-QKVNIR 514
             GLPY+GQMIHP EPYC+IYD+ TN+ +TN+RKGS+ VFVDYVAVD KN  N+ QK NIR
Sbjct: 733  DGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIR 792

Query: 515  FSTSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMH 667
            F  +  P               F+  +GQ   C  L             +R  L   P  
Sbjct: 793  FRHTRNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA 842

Query: 668  FHQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASGGDT 805
            F   MT+  L +S+AAKGG +  +   DATPF ++    K + GDT
Sbjct: 843  FPSRMTIAMLLESVAAKGGSLHGK-FMDATPFANSV---KKTNGDT 884



 Score = 41.2 bits (95), Expect(2) = 8e-51
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DEYPTGTNAI AVLAYTG
Sbjct: 651 KYSIDEYPTGTNAIVAVLAYTG 672


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  189 bits (479), Expect(2) = 2e-50
 Identities = 113/222 (50%), Positives = 142/222 (63%), Gaps = 9/222 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSV+R + HGQIYQTETIDLS+E +KS R Q+MFRRSN+D+S +S I S
Sbjct: 735  YDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDS 794

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQMI+PNEPYC+IY+EVT++T+    KGS+PV VDYVA+D KNK + QKVNIRF
Sbjct: 795  DGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRF 854

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 855  RRPRNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 904

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASG 796
               MT+  L +S+AAKGG +  + + DATPF  + S  KA+G
Sbjct: 905  PSRMTIAMLLESVAAKGGSLHGKFV-DATPF--SDSLRKANG 943



 Score = 38.1 bits (87), Expect(2) = 2e-50
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAY+G
Sbjct: 713 KYSMDEFPTGTNAIVAVLAYSG 734


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  189 bits (479), Expect(2) = 2e-50
 Identities = 113/222 (50%), Positives = 142/222 (63%), Gaps = 9/222 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSV+R + HGQIYQTETIDLS+E +KS R Q+MFRRSN+D+S +S I S
Sbjct: 728  YDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDS 787

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQMI+PNEPYC+IY+EVT++T+    KGS+PV VDYVA+D KNK + QKVNIRF
Sbjct: 788  DGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRF 847

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 848  RRPRNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 897

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASG 796
               MT+  L +S+AAKGG +  + + DATPF  + S  KA+G
Sbjct: 898  PSRMTIAMLLESVAAKGGSLHGKFV-DATPF--SDSLRKANG 936



 Score = 38.1 bits (87), Expect(2) = 2e-50
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAY+G
Sbjct: 706 KYSMDEFPTGTNAIVAVLAYSG 727


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  185 bits (469), Expect(2) = 9e-50
 Identities = 112/222 (50%), Positives = 140/222 (63%), Gaps = 9/222 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER MFHGQIYQTETIDL+E+G +S R+ +MFR+SNI++S    I S
Sbjct: 766  YDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDS 825

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLP++GQMI P+EPYC+IY+EVT++  T  RKGS+ V+VDYVA D KNK ++QKVNIRF
Sbjct: 826  DGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRF 885

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 886  RHPRNPV----------IGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAF 935

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASG 796
               MT+  L +S+AAKGG ++ E + DATPF   SS  K SG
Sbjct: 936  PSRMTIAMLLESVAAKGGSLRGEFV-DATPF--RSSVTKDSG 974



 Score = 39.7 bits (91), Expect(2) = 9e-50
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAYTG
Sbjct: 744 KYNIDEFPTGTNAIVAVLAYTG 765


>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  184 bits (467), Expect(2) = 1e-49
 Identities = 108/217 (49%), Positives = 140/217 (64%), Gaps = 11/217 (5%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER MFHGQIYQTETIDL+E+  KS R+ ++FR+SN+++     I S
Sbjct: 766  YDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDS 825

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLP++GQMI P+EPYC+IY+EVT++T+T  RKGS+ V+VDYVAVD KNK +IQKVNIRF
Sbjct: 826  DGLPHVGQMIRPDEPYCSIYNEVTSSTQTYKRKGSEAVYVDYVAVDVKNKKHIQKVNIRF 885

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFLELLECVLIRLS-----------LPM 664
                 P               F+  +GQ   C   +L   V +  S            P 
Sbjct: 886  RHPRNPV----------IGDKFSSRHGQKGVCS--QLWPDVDMPFSGNTGMRPDLIINPH 933

Query: 665  HFHQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNS 775
             F   MT+  L +S+AAKGG ++ E + DATPF S++
Sbjct: 934  AFPSRMTIAMLLESVAAKGGSLRGEFV-DATPFRSST 969



 Score = 39.7 bits (91), Expect(2) = 1e-49
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAYTG
Sbjct: 744 KYNIDEFPTGTNAIVAVLAYTG 765


>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  182 bits (463), Expect(2) = 4e-49
 Identities = 111/224 (49%), Positives = 141/224 (62%), Gaps = 11/224 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER MFHGQIYQTETIDL+E+G +  R+ +MFR+SN+++S    I S
Sbjct: 766  YDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDS 825

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLP++GQMI P+EPYC+IY+EVT++  T  RKGS+ V+VDYVAVD KNK ++QKVNIRF
Sbjct: 826  DGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRF 885

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFLELLECVLIRLS-----------LPM 664
                 P               F+  +GQ   C   +L   V +  S            P 
Sbjct: 886  RHPRNPV----------IGDKFSSRHGQKGVCS--QLWPDVDMPFSGNTGMRPDLIINPH 933

Query: 665  HFHQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSNSS*NKASG 796
             F   MT+  L +S+AAKGG ++ E + DATPF   SS  K SG
Sbjct: 934  AFPSRMTIAMLLESVAAKGGSLRGEFV-DATPF--RSSVKKDSG 974



 Score = 39.7 bits (91), Expect(2) = 4e-49
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+PTGTNAI AVLAYTG
Sbjct: 744 KYNIDEFPTGTNAIVAVLAYTG 765


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score =  184 bits (466), Expect(2) = 3e-48
 Identities = 105/211 (49%), Positives = 134/211 (63%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAM+LNKSSV+R M HG IYQTETIDL+E+ +KS RAQ++FRRSN+D+S H  I +
Sbjct: 776  YDMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDT 835

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQ I+PNEPYC+IY+E+T+ T +   KGS+PV VDYVAVD KNK ++QK NIRF
Sbjct: 836  DGLPYVGQRINPNEPYCSIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRF 895

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
              S  P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 896  RRSRNPV----------IGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAF 945

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+AAKGG +  + + DATPF
Sbjct: 946  PSRMTIAMLLESIAAKGGALHGKFV-DATPF 975



 Score = 35.8 bits (81), Expect(2) = 3e-48
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +D+YP GTNAI AVLAY+G
Sbjct: 754 KYCVDDYPLGTNAIVAVLAYSG 775


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score =  183 bits (465), Expect(2) = 3e-48
 Identities = 106/211 (50%), Positives = 133/211 (63%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAM+LNKSSV+R M HG IYQTETIDL+E+ +KS RAQ++FRRSN+D+S H  I S
Sbjct: 781  YDMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDS 840

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQ I+PNEPYC+IY+E+T+ T     KGS+PV VDYVAVD KNK ++QK NIRF
Sbjct: 841  DGLPYVGQRINPNEPYCSIYNEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRF 900

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
              S  P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 901  RRSRNPV----------IGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAF 950

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+AAKGG +  + + DATPF
Sbjct: 951  PSRMTIAMLLESIAAKGGALHGKFV-DATPF 980



 Score = 35.8 bits (81), Expect(2) = 3e-48
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +D+YP GTNAI AVLAY+G
Sbjct: 759 KYCVDDYPLGTNAIVAVLAYSG 780


>gb|ESQ33885.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score =  179 bits (453), Expect(2) = 1e-46
 Identities = 105/211 (49%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            +DMEDAMILNKSSVER M HGQIYQTET+DLS++ S+S    + FRRS +D+S HS I +
Sbjct: 770  FDMEDAMILNKSSVERGMCHGQIYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDA 829

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPYIGQ I+PNEPYC+IYD VTN+ KT  RKG+DPV VD+V+VD K+K + QK NIRF
Sbjct: 830  DGLPYIGQKIYPNEPYCSIYDGVTNSIKTMKRKGTDPVIVDFVSVDMKSKKHPQKANIRF 889

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
              +  P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 890  RHARNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAF 939

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+AAKGG ++ E + DATPF
Sbjct: 940  PSRMTIAMLLESIAAKGGSLRGEFV-DATPF 969



 Score = 35.0 bits (79), Expect(2) = 1e-46
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 21  Y*LDEYPTGTNAIFAVLAYTG 83
           Y +DE PTGTNAI AVLA+TG
Sbjct: 749 YSIDENPTGTNAIVAVLAHTG 769


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score =  175 bits (443), Expect(2) = 1e-46
 Identities = 106/214 (49%), Positives = 133/214 (62%), Gaps = 9/214 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER MFHGQIYQTETIDL+E+G KS ++ ++FR+S +D+   S I S
Sbjct: 771  YDMEDAMILNKSSVERGMFHGQIYQTETIDLTEKGGKSDQSARVFRKSKLDKPCPS-IDS 829

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLP++GQMI P+EPYC+ Y+EVTN T    +KGS+PV+VDYVAVDTK K N+ KVNIRF
Sbjct: 830  DGLPHVGQMIWPDEPYCSTYNEVTNKTYLFKKKGSEPVYVDYVAVDTKTKKNLNKVNIRF 889

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 890  RHPRNPV----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAF 939

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPFLSN 772
               MT+  L +S+AAKGG +  +   DATPF S+
Sbjct: 940  PSRMTIAMLLESVAAKGGSLHGK-FKDATPFRSS 972



 Score = 38.9 bits (89), Expect(2) = 1e-46
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +3

Query: 21  Y*LDEYPTGTNAIFAVLAYTG 83
           Y +DEYP+GTNAI AVLAYTG
Sbjct: 750 YSIDEYPSGTNAIVAVLAYTG 770


>gb|ESQ33886.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum]
          Length = 1181

 Score =  177 bits (450), Expect(2) = 7e-46
 Identities = 104/211 (49%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            +DMEDAMILNKSSVER M HGQIYQTET+DLS++ S+S  A K FRRS +D+S HS I +
Sbjct: 768  FDMEDAMILNKSSVERGMCHGQIYQTETVDLSDQRSRSENAHKSFRRSKVDKSAHSCIDA 827

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQ I+PNEPYC+I+D VTN+ KT  RKG+DPV VD+V+VD K+K + QK NIRF
Sbjct: 828  DGLPYVGQKIYPNEPYCSIHDGVTNSIKTIKRKGTDPVVVDFVSVDMKSKTHPQKANIRF 887

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
              +  P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 888  RHARNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAF 937

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+ AKGG ++ E + DATPF
Sbjct: 938  PSRMTIAMLLESIGAKGGSLRGEFV-DATPF 967



 Score = 33.9 bits (76), Expect(2) = 7e-46
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 21  Y*LDEYPTGTNAIFAVLAYTG 83
           Y +DE PTGTNAI AVL++TG
Sbjct: 747 YSIDENPTGTNAIVAVLSHTG 767


>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA polymerase
            I subunit RPA2-like [Setaria italica]
          Length = 1172

 Score =  117 bits (292), Expect(4) = 3e-45
 Identities = 59/127 (46%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKS+V+R MF G IYQTE IDLS++  ++    ++F +S + R   + I S
Sbjct: 752  YDMEDAMILNKSAVDRGMFRGHIYQTECIDLSKKNRENV--PEIFAKSVLSRDTSTAIDS 809

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVD-TKNKNNIQKVNIR 514
             GLP +GQ +HPNE Y ++Y+ +T   +    KG++P F+DYVAV+   +K + QK NIR
Sbjct: 810  DGLPRLGQTVHPNEQYYSVYNRLTGAIRPVRLKGTEPAFIDYVAVNGASSKGDFQKANIR 869

Query: 515  FSTSHKP 535
                  P
Sbjct: 870  LRRVRNP 876



 Score = 63.2 bits (152), Expect(4) = 3e-45
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = +1

Query: 568 GRKGVCSPLWTDIDMPFSGATGMRTDQIITPHAFPS 675
           G+KGVCS LW DIDMPFS  TGMR D II PHAFPS
Sbjct: 887 GQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPS 922



 Score = 38.1 bits (87), Expect(4) = 3e-45
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DE+P+GTNAI AVLAYTG
Sbjct: 730 KYCMDEFPSGTNAIVAVLAYTG 751



 Score = 32.3 bits (72), Expect(4) = 3e-45
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 531 NPIIGDKFINRHGQK 575
           NPIIGDKF +RHGQK
Sbjct: 875 NPIIGDKFSSRHGQK 889


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  168 bits (426), Expect(2) = 8e-45
 Identities = 101/211 (47%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER M HGQIYQTETIDL ++ SKS R Q++F+R + DRS  S + S
Sbjct: 773  YDMEDAMILNKSSVERGMCHGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDS 832

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLP++GQ+I PNEPYC+  ++VTN+ +  N KGS+ V VDYVAVDTK+K ++QK NIRF
Sbjct: 833  DGLPHVGQVIRPNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVDTKSKKHLQKANIRF 892

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 893  RHPRNPV----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 942

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+AAKGG +  + + DATPF
Sbjct: 943  PSRMTIAMLLESVAAKGGSLHGKFV-DATPF 972



 Score = 39.7 bits (91), Expect(2) = 8e-45
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DEYP+GTNAI AVLAYTG
Sbjct: 751 KYCMDEYPSGTNAIVAVLAYTG 772


>gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1074

 Score =  168 bits (426), Expect(2) = 8e-45
 Identities = 101/211 (47%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            YDMEDAMILNKSSVER M HGQIYQTETIDL ++ SKS R Q++F+R + DRS  S + S
Sbjct: 646  YDMEDAMILNKSSVERGMCHGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDS 705

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLP++GQ+I PNEPYC+  ++VTN+ +  N KGS+ V VDYVAVDTK+K ++QK NIRF
Sbjct: 706  DGLPHVGQVIRPNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVDTKSKKHLQKANIRF 765

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
                 P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 766  RHPRNPV----------IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 815

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+AAKGG +  + + DATPF
Sbjct: 816  PSRMTIAMLLESVAAKGGSLHGKFV-DATPF 845



 Score = 39.7 bits (91), Expect(2) = 8e-45
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +3

Query: 18  RY*LDEYPTGTNAIFAVLAYTG 83
           +Y +DEYP+GTNAI AVLAYTG
Sbjct: 624 KYCMDEYPSGTNAIVAVLAYTG 645


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score =  167 bits (422), Expect(2) = 5e-43
 Identities = 101/211 (47%), Positives = 127/211 (60%), Gaps = 9/211 (4%)
 Frame = +2

Query: 158  YDMEDAMILNKSSVEREMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSPIHS 337
            +DMEDAMILNKSSVER M HGQIYQTE IDLS++ S+     K FRRS  D+S HS I +
Sbjct: 756  FDMEDAMILNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDA 815

Query: 338  HGLPYIGQMIHPNEPYCNIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRF 517
             GLPY+GQ I+P+EPY +IYDEVTN  +T  RKG+DPV VD+V+VD K+K + QK NIRF
Sbjct: 816  DGLPYVGQKIYPDEPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHPQKANIRF 875

Query: 518  STSHKPYHW**IY*QTRAEKVFALHYGQTSTCHFL------ELLECVLIRLSL---PMHF 670
              +  P               F+  +GQ   C  L             +R  L   P  F
Sbjct: 876  RHARNPI----------IGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAF 925

Query: 671  HQ*MTLDRLWKSLAAKGG*IKWENLWDATPF 763
               MT+  L +S+AAKGG +  + + DATPF
Sbjct: 926  PSRMTIAMLLESIAAKGGSLHGKFV-DATPF 955



 Score = 35.0 bits (79), Expect(2) = 5e-43
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 21  Y*LDEYPTGTNAIFAVLAYTG 83
           Y +DE PTGTNAI AVLA+TG
Sbjct: 735 YSIDENPTGTNAIVAVLAHTG 755