BLASTX nr result
ID: Jatropha_contig00046726
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00046726
(314 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus... 136 3e-30
gb|ABK96168.1| unknown [Populus trichocarpa] 130 2e-28
ref|XP_002302257.1| predicted protein [Populus trichocarpa] 128 8e-28
gb|ESR56218.1| hypothetical protein CICLE_v10022660mg [Citrus cl... 110 1e-22
gb|EEE81530.2| hypothetical protein POPTR_0002s08910g, partial [... 103 2e-20
gb|EOY16178.1| Ribosomal protein S13/S18 family, putative [Theob... 97 2e-18
ref|XP_006302950.1| hypothetical protein CARUB_v10021089mg [Caps... 94 1e-17
gb|ESW13639.1| hypothetical protein PHAVU_008G213500g [Phaseolus... 92 5e-17
gb|ESQ27345.1| hypothetical protein EUTSA_v10019274mg [Eutrema s... 92 5e-17
ref|NP_177898.1| small ribosomal subunit protein S13 [Arabidopsi... 92 5e-17
ref|XP_003607680.1| Small ribosomal subunit protein S13 [Medicag... 90 3e-16
ref|XP_002889157.1| hypothetical protein ARALYDRAFT_476938 [Arab... 89 4e-16
ref|XP_004505445.1| PREDICTED: small ribosomal subunit protein S... 87 2e-15
gb|ERM95283.1| hypothetical protein AMTR_s00008p00089340 [Ambore... 86 4e-15
ref|XP_004501871.1| PREDICTED: small ribosomal subunit protein S... 86 6e-15
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro... 85 1e-14
ref|NP_001237689.1| uncharacterized protein LOC100499902 [Glycin... 84 2e-14
gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao] 81 1e-13
gb|ESR47358.1| hypothetical protein CICLE_v10002692mg [Citrus cl... 80 3e-13
gb|ESR47357.1| hypothetical protein CICLE_v10002692mg [Citrus cl... 80 3e-13
>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
putative [Ricinus communis]
Length = 290
Score = 136 bits (342), Expect = 3e-30
Identities = 67/93 (72%), Positives = 82/93 (88%), Gaps = 4/93 (4%)
Frame = +2
Query: 47 GSRGSVGILSNIGQSLLQNLS----FRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQ 214
GSRGS+G+L++IG +L+NLS FR QRVQCLR+GNAEIP++K+LR+ALQHI+GIGRQ
Sbjct: 3 GSRGSIGLLTDIGHCVLKNLSTILQFRYQRVQCLRVGNAEIPDDKQLRFALQHIRGIGRQ 62
Query: 215 RAHKILVDLSLENKPAKDLTGFELHSLREEVSK 313
RAH+IL+DLSLENK KDLTG ELH+LR EVSK
Sbjct: 63 RAHQILIDLSLENKRTKDLTGLELHTLRNEVSK 95
Score = 79.7 bits (195), Expect = 3e-13
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +2
Query: 98 QNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAHKILVDLSLENKPAKDLTG 277
Q+L+ ++C R+G EIPN KR+ Y+LQ+I G+GR RA +IL DLS+ENK K+L+
Sbjct: 157 QSLAVHGLSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKITKELSE 216
Query: 278 FELHSLREEVSK 313
EL +LR+EVSK
Sbjct: 217 EELITLRDEVSK 228
>gb|ABK96168.1| unknown [Populus trichocarpa]
Length = 163
Score = 130 bits (326), Expect = 2e-28
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG RGSV +L+ I QSLLQN +FRCQRVQ LR+GN EIPN+K+L ALQ+I GIGR+RAH
Sbjct: 2 LGLRGSVRLLTEINQSLLQNATFRCQRVQGLRVGNTEIPNDKKLEVALQYIHGIGRKRAH 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEVSK 313
+IL +LSL NKP KDLTG EL+SLREEVSK
Sbjct: 62 QILCELSLVNKPTKDLTGIELNSLREEVSK 91
>ref|XP_002302257.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 128 bits (321), Expect = 8e-28
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG RGSV +L+ I QSLLQN +FRCQ VQ LR+GN EIPN+K+L ALQ+I GIGR+RAH
Sbjct: 2 LGLRGSVRLLTEINQSLLQNATFRCQHVQGLRVGNTEIPNDKKLEVALQYIHGIGRKRAH 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEVSK 313
+IL +LSL NKP KDLTG EL+SLREEVSK
Sbjct: 62 QILCELSLVNKPTKDLTGIELNSLREEVSK 91
>gb|ESR56218.1| hypothetical protein CICLE_v10022660mg [Citrus clementina]
Length = 153
Score = 110 bits (276), Expect = 1e-22
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +2
Query: 53 RGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAHKIL 232
R SVG+LSN+ + L+Q +SF RVQ LR+GN EIPN+KRL +LQH+ GIGR RAH+IL
Sbjct: 5 RNSVGMLSNVSRQLIQTISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL 64
Query: 233 VDLSLENKPAKDLTGFELHSLREEVSK 313
DL++ NK K+LTG EL+SLREEVS+
Sbjct: 65 CDLNIGNKLTKELTGVELNSLREEVSR 91
>gb|EEE81530.2| hypothetical protein POPTR_0002s08910g, partial [Populus
trichocarpa]
Length = 124
Score = 103 bits (257), Expect = 2e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +2
Query: 110 FRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAHKILVDLSLENKPAKDLTGFELH 289
FRCQ VQ LR+GN EIPN+K+L ALQ+I GIGR+RAH+IL +LSL NKP KDLTG EL+
Sbjct: 1 FRCQHVQGLRVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSLVNKPTKDLTGIELN 60
Query: 290 SLREEVSK 313
SLREEVSK
Sbjct: 61 SLREEVSK 68
>gb|EOY16178.1| Ribosomal protein S13/S18 family, putative [Theobroma cacao]
Length = 156
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/89 (56%), Positives = 66/89 (74%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG RGSVG+LS++ LLQN++F +VQ +R+G AEIP+ KRL +LQ I GIGR RA
Sbjct: 2 LGLRGSVGVLSDVSHQLLQNITFHGIKVQYIRVGGAEIPDHKRLAVSLQSIFGIGRTRAR 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEVS 310
+IL +L+++NK +LTG EL SLRE VS
Sbjct: 62 QILSELNIDNKLTNELTGKELMSLREHVS 90
>ref|XP_006302950.1| hypothetical protein CARUB_v10021089mg [Capsella rubella]
gi|482571660|gb|EOA35848.1| hypothetical protein
CARUB_v10021089mg [Capsella rubella]
Length = 154
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/90 (52%), Positives = 65/90 (72%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG R S L +I QSLL+N++F RVQ +R+GNAE+PN K L+ LQ + GIGR+++H
Sbjct: 2 LGLRRSAATLFDISQSLLRNVTFHGVRVQGIRVGNAEVPNNKPLKTGLQEVYGIGRRKSH 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEVSK 313
++L +L + NK A+DLTG EL LREEV +
Sbjct: 62 QVLCELGITNKLARDLTGKELIDLREEVGQ 91
>gb|ESW13639.1| hypothetical protein PHAVU_008G213500g [Phaseolus vulgaris]
Length = 148
Score = 92.4 bits (228), Expect = 5e-17
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +2
Query: 56 GSVGILSNIGQSLLQNLSFRCQRVQCLRIGNA---EIPNEKRLRYALQHIQGIGRQRAHK 226
GS I S++ L QNLSFRC RVQ + IG EIP+ KRL YALQH+ GIGR +AH
Sbjct: 3 GSARIFSDVALRLRQNLSFRCVRVQNINIGGGMGGEIPDNKRLEYALQHLHGIGRSKAHH 62
Query: 227 ILVDLSLENKPAKDLTGFELHSLREEVSK 313
I+ +L +ENK KDL+ EL+S+RE +SK
Sbjct: 63 IVCELGVENKFVKDLSKRELYSIRELLSK 91
>gb|ESQ27345.1| hypothetical protein EUTSA_v10019274mg [Eutrema salsugineum]
Length = 154
Score = 92.4 bits (228), Expect = 5e-17
Identities = 48/88 (54%), Positives = 62/88 (70%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG R S L + QSLL+NLSF RVQ +R+GNAE+PN K L+ LQ + GIGR+++H
Sbjct: 2 LGLRRSAATLFDHSQSLLRNLSFHGLRVQGIRVGNAEVPNHKPLKTGLQEVYGIGRRKSH 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEV 307
++L L + NK A+DLTG EL LREEV
Sbjct: 62 QVLCGLGITNKLARDLTGKELIDLREEV 89
>ref|NP_177898.1| small ribosomal subunit protein S13 [Arabidopsis thaliana]
gi|32363391|sp|Q9CA19.1|RT13_ARATH RecName: Full=Small
ribosomal subunit protein S13, mitochondrial;
Short=mS13; Flags: Precursor
gi|12323293|gb|AAG51625.1|AC012193_7 putative 30S
ribosomal protein S13; 38847-37703 [Arabidopsis
thaliana] gi|33589778|gb|AAQ22655.1| At1g77750
[Arabidopsis thaliana] gi|332197896|gb|AEE36017.1| small
ribosomal subunit protein S13 [Arabidopsis thaliana]
Length = 154
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/90 (52%), Positives = 64/90 (71%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG R S L +I QSLL+N++F RVQ +R+GNAE+PN K L+ LQ + GIGR+++H
Sbjct: 2 LGLRRSATTLFDISQSLLRNVTFHGLRVQGIRVGNAEVPNNKPLKTGLQEVYGIGRRKSH 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEVSK 313
++L L + NK A+DLTG EL LREEV +
Sbjct: 62 QVLCHLGITNKLARDLTGKELIDLREEVGQ 91
>ref|XP_003607680.1| Small ribosomal subunit protein S13 [Medicago truncatula]
gi|355508735|gb|AES89877.1| Small ribosomal subunit
protein S13 [Medicago truncatula]
Length = 148
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +2
Query: 56 GSVGILSNIGQSLLQNLSFRCQRVQCLRIGNA---EIPNEKRLRYALQHIQGIGRQRAHK 226
GS G+ SNI L QNLSFR +V+ + IG EIP+ KRL YALQHI GIGR +AH
Sbjct: 3 GSAGMFSNIAVCLRQNLSFRGVQVRNINIGGGLGGEIPDNKRLEYALQHIHGIGRGKAHH 62
Query: 227 ILVDLSLENKPAKDLTGFELHSLREEVSK 313
I+ +L +ENK KDL+ EL+SLRE +SK
Sbjct: 63 IVCELGVENKYVKDLSKRELYSLRELLSK 91
>ref|XP_002889157.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp.
lyrata] gi|297334998|gb|EFH65416.1| hypothetical protein
ARALYDRAFT_476938 [Arabidopsis lyrata subsp. lyrata]
Length = 154
Score = 89.4 bits (220), Expect = 4e-16
Identities = 46/90 (51%), Positives = 63/90 (70%)
Frame = +2
Query: 44 LGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAH 223
LG R S L +I QSLL+N++F RVQ +R+GNAE+PN L+ LQ + GIGR+++H
Sbjct: 2 LGLRRSATTLFDISQSLLRNVTFHGLRVQGIRVGNAEVPNNMPLKTGLQAVYGIGRRKSH 61
Query: 224 KILVDLSLENKPAKDLTGFELHSLREEVSK 313
++L L + NK A+DLTG EL LREEV +
Sbjct: 62 QVLCHLGITNKLARDLTGKELIDLREEVGQ 91
>ref|XP_004505445.1| PREDICTED: small ribosomal subunit protein S13, mitochondrial-like
[Cicer arietinum]
Length = 148
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +2
Query: 56 GSVGILSNIGQSLLQNLSFRCQRVQCLRIGNA---EIPNEKRLRYALQHIQGIGRQRAHK 226
GS G +SNI L QNL+ R +V+ + IG EIP+ KRL+YALQH+ GIGR +AH
Sbjct: 3 GSTGFVSNIAACLRQNLTLRGVQVRNINIGGGLGGEIPDSKRLQYALQHLHGIGRSKAHH 62
Query: 227 ILVDLSLENKPAKDLTGFELHSLREEVSK 313
I+ +L +ENK KDL+ EL+SLRE +SK
Sbjct: 63 IVCELGVENKYVKDLSKRELYSLRELLSK 91
>gb|ERM95283.1| hypothetical protein AMTR_s00008p00089340 [Amborella trichopoda]
Length = 167
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/100 (47%), Positives = 65/100 (65%)
Frame = +2
Query: 14 AIKIKMALRRLGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQH 193
AI + AL L G+ LS + +L F+ ++C+RIG EIPN KR++Y+LQ+
Sbjct: 6 AIPVAPALSVLNKGGNASSLSIPSSTSSLSLKFQGLSIKCVRIGGVEIPNNKRVQYSLQY 65
Query: 194 IQGIGRQRAHKILVDLSLENKPAKDLTGFELHSLREEVSK 313
I GIGR RA +IL DL ++NK KDL+ EL S+R+EVSK
Sbjct: 66 IHGIGRTRALQILCDLGMQNKITKDLSEEELKSVRDEVSK 105
>ref|XP_004501871.1| PREDICTED: small ribosomal subunit protein S13, mitochondrial-like
[Cicer arietinum]
Length = 148
Score = 85.5 bits (210), Expect = 6e-15
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +2
Query: 56 GSVGILSNIGQSLLQNLSFRCQRVQCLRIGNA---EIPNEKRLRYALQHIQGIGRQRAHK 226
GSV I+SNI + QNLS +V+ + IG EIP+ KRL+YALQH+ G+GR +AH
Sbjct: 3 GSVRIVSNIAACIRQNLSLHGVQVRNINIGGGLGGEIPDSKRLQYALQHLHGVGRSKAHH 62
Query: 227 ILVDLSLENKPAKDLTGFELHSLREEVSK 313
I+ +L +ENK KDL+ EL+SLRE +SK
Sbjct: 63 IVCELGVENKYVKDLSKRELYSLRELLSK 91
>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Cucumis
sativus]
Length = 167
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/101 (43%), Positives = 66/101 (65%)
Frame = +2
Query: 11 AAIKIKMALRRLGSRGSVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQ 190
+AI + +L + + + LSN + N R +++C+R+G EIPN KR++Y+LQ
Sbjct: 5 SAIPLAHSLSLISNSRNFNPLSNTLSFPISNPQVRGLQIKCVRVGGVEIPNNKRVQYSLQ 64
Query: 191 HIQGIGRQRAHKILVDLSLENKPAKDLTGFELHSLREEVSK 313
++ GIGR A KIL DL++ENK KDL+ EL S+R+EVSK
Sbjct: 65 YVHGIGRNNAKKILFDLNVENKITKDLSEEELISIRDEVSK 105
>ref|NP_001237689.1| uncharacterized protein LOC100499902 [Glycine max]
gi|255627531|gb|ACU14110.1| unknown [Glycine max]
Length = 162
Score = 83.6 bits (205), Expect = 2e-14
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
Frame = +2
Query: 59 SVGILSN------IGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRA 220
S+ I+SN + +L N F+ ++C+R+G EIPN KR+ Y+LQHI G+GR RA
Sbjct: 12 SLAIISNSRLSKTLSVPVLNNPKFQGLSIKCVRVGGVEIPNNKRIEYSLQHIHGVGRTRA 71
Query: 221 HKILVDLSLENKPAKDLTGFELHSLREEVSK 313
+IL D+ ++NK K+LT EL +LR+EVSK
Sbjct: 72 KQILCDIQMDNKITKELTEEELITLRDEVSK 102
>gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao]
Length = 168
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +2
Query: 59 SVGILSNIGQSLLQNLSFRCQRVQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAHKILVD 238
S+ + +++ L +R ++C R+G EIPN KR+ ++LQ+I GIGR RA KIL D
Sbjct: 22 SLSLSNSVSLPLSNPPKYRSLSIECARVGGVEIPNNKRVEFSLQYIHGIGRSRARKILCD 81
Query: 239 LSLENKPAKDLTGFELHSLREEVSK 313
L +ENK KDL+ EL ++R+EVSK
Sbjct: 82 LKMENKITKDLSEEELITIRDEVSK 106
>gb|ESR47358.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
Length = 169
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/63 (57%), Positives = 49/63 (77%)
Frame = +2
Query: 125 VQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAHKILVDLSLENKPAKDLTGFELHSLREE 304
+QC R+G EIPN KR+ Y+LQ+I G+GR RA +ILVDL +ENK KD++ EL ++R+E
Sbjct: 45 IQCARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKITKDMSEEELITIRDE 104
Query: 305 VSK 313
VSK
Sbjct: 105 VSK 107
>gb|ESR47357.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
Length = 126
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/63 (57%), Positives = 49/63 (77%)
Frame = +2
Query: 125 VQCLRIGNAEIPNEKRLRYALQHIQGIGRQRAHKILVDLSLENKPAKDLTGFELHSLREE 304
+QC R+G EIPN KR+ Y+LQ+I G+GR RA +ILVDL +ENK KD++ EL ++R+E
Sbjct: 45 IQCARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKITKDMSEEELITIRDE 104
Query: 305 VSK 313
VSK
Sbjct: 105 VSK 107