BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046679
         (865 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    66   1e-08
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     63   1e-07

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 61/199 (30%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
 Frame = +3

Query: 69   QMVTLRIIFWGEAV-VXXXXXXXXXXXXXXXXXPENAWRGIDIPYSRNMVFG*PTFMHVP 245
            +M  L   FWGEAV                   PE  W   ++ YS   VFG   F HVP
Sbjct: 601  RMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVP 660

Query: 246  LPY*LNLDDKSFPCTFVGYGDQNLGYC*GTPLEFTGIP*Q-------*DRLGYHL*RILN 404
                  LDDKS PC F+GYGD+  GY    P++   I  +         R    +   + 
Sbjct: 661  KEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVK 720

Query: 405  DGVID--LTLGSFPNNDDAREDLPS--SQQHEQDDACILDPEMIVYDSSDTYVVSHGESD 572
            +G+I   +T+ S  NN  + E      S+Q EQ    I   E +     D  V    E +
Sbjct: 721  NGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQL-----DEGV---EEVE 772

Query: 573  NPTPSERSHIHLKRTPR*R 629
            +PT  E  H  L+R+ R R
Sbjct: 773  HPTQGEEQHQPLRRSERPR 791


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 34/86 (39%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +3

Query: 69  QMVTLRIIFWGEAV-VXXXXXXXXXXXXXXXXXPENAWRGIDIPYSRNMVFG*PTFMHVP 245
           +M  L   FWGEAV                   PE  W   ++ YS   VFG   F HVP
Sbjct: 602 RMAKLPKTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVP 661

Query: 246 LPY*LNLDDKSFPCTFVGYGDQNLGY 323
                 LDDKS PC F+GYGD+  GY
Sbjct: 662 KEQRTKLDDKSVPCIFIGYGDEEFGY 687