BLASTX nr result

ID: Jatropha_contig00046538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046538
         (394 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510159.1| conserved hypothetical protein [Ricinus comm...    75   9e-19
gb|ABK95871.1| unknown [Populus trichocarpa]                           68   4e-14
ref|XP_002301164.1| predicted protein [Populus trichocarpa]            66   7e-14
gb|ERP64296.1| hypothetical protein POPTR_0002s12430g [Populus t...    65   1e-13
gb|EEE80437.2| hypothetical protein POPTR_0002s12430g [Populus t...    63   6e-13
ref|XP_004291066.1| PREDICTED: uncharacterized protein LOC101292...    48   2e-06

>ref|XP_002510159.1| conserved hypothetical protein [Ricinus communis]
           gi|223550860|gb|EEF52346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 75.5 bits (184), Expect(2) = 9e-19
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = +3

Query: 21  MNSQGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVHLTRQKK 164
           MN+QGTERVNEEGAIET VDT+DYR+ A  +EP KE VGVVHL R K+
Sbjct: 1   MNTQGTERVNEEGAIETTVDTIDYRTPAGADEPRKENVGVVHLKRNKE 48



 Score = 43.5 bits (101), Expect(2) = 9e-19
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 191 LARTAAAVTNTLRSAKDAVVGRGKD 265
           LARTAAAVTNT+ SAKDA+VG+ KD
Sbjct: 54  LARTAAAVTNTIESAKDAIVGKSKD 78


>gb|ABK95871.1| unknown [Populus trichocarpa]
          Length = 86

 Score = 68.2 bits (165), Expect(2) = 4e-14
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +3

Query: 21  MNSQGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVHLTRQKKGS 170
           M +QGTER+NEEG  ET+V+TVD+R SA Q EP  EKVGVVHL R  + S
Sbjct: 1   MKTQGTERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHLKRNTRDS 50



 Score = 35.0 bits (79), Expect(2) = 4e-14
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +2

Query: 191 LARTAAAVTNTLRSAKDAVVGRGKDKDST 277
           L+   AAVTNT +SAKDA++G G+ KD+T
Sbjct: 57  LSSAVAAVTNTFKSAKDAIMG-GRGKDNT 84


>ref|XP_002301164.1| predicted protein [Populus trichocarpa]
          Length = 87

 Score = 65.9 bits (159), Expect(2) = 7e-14
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = +3

Query: 30  QGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVHLTRQKKGS 170
           QGTER+NEEG  ET+V+TVD+R SA Q EP  EKVGVVHL R  + S
Sbjct: 5   QGTERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHLKRNTRDS 51



 Score = 36.6 bits (83), Expect(2) = 7e-14
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 191 LARTAAAVTNTLRSAKDAVVGRGKDKDST 277
           L+  AAAVTNT +SAKDA++G G+ KD+T
Sbjct: 58  LSSAAAAVTNTFKSAKDAIMG-GRGKDNT 85


>gb|ERP64296.1| hypothetical protein POPTR_0002s12430g [Populus trichocarpa]
          Length = 86

 Score = 65.1 bits (157), Expect(2) = 1e-13
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +3

Query: 21  MNSQGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVHLTRQKKGS 170
           M +Q TER+NEEG  ET+V+TVD+R SA Q EP  EKVGVVHL R  + S
Sbjct: 1   MKTQETERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHLKRNTRDS 50



 Score = 36.6 bits (83), Expect(2) = 1e-13
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 191 LARTAAAVTNTLRSAKDAVVGRGKDKDST 277
           L+  AAAVTNT +SAKDA++G G+ KD+T
Sbjct: 57  LSSAAAAVTNTFKSAKDAIMG-GRGKDNT 84


>gb|EEE80437.2| hypothetical protein POPTR_0002s12430g [Populus trichocarpa]
          Length = 87

 Score = 62.8 bits (151), Expect(2) = 6e-13
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = +3

Query: 30  QGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVHLTRQKKGS 170
           Q TER+NEEG  ET+V+TVD+R SA Q EP  EKVGVVHL R  + S
Sbjct: 5   QETERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHLKRNTRDS 51



 Score = 36.6 bits (83), Expect(2) = 6e-13
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 191 LARTAAAVTNTLRSAKDAVVGRGKDKDST 277
           L+  AAAVTNT +SAKDA++G G+ KD+T
Sbjct: 58  LSSAAAAVTNTFKSAKDAIMG-GRGKDNT 85


>ref|XP_004291066.1| PREDICTED: uncharacterized protein LOC101292566 [Fragaria vesca
           subsp. vesca]
          Length = 105

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 23/38 (60%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +3

Query: 36  TERVNEEGAIETKVDTVDYRSSAAQE-EPNKEKVGVVH 146
           TE VNE+G +E KVDTVD+RS A  + EP KEKV ++H
Sbjct: 8   TEGVNEQGGVEVKVDTVDFRSPAGDDKEPVKEKVEILH 45



 Score = 29.3 bits (64), Expect(2) = 2e-06
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 197 RTAAAVTNTLRSAKDAVVGRGKD 265
           + A AV +T +SAKDAV G+ KD
Sbjct: 65  KAATAVADTFKSAKDAVSGKPKD 87


Top