BLASTX nr result

ID: Jatropha_contig00046459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046459
         (871 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524752.1| nucleolar protein nop56, putative [Ricinus c...    39   4e-07
gb|ABO36677.1| vicilin [Pistacia vera]                                 45   5e-07

>ref|XP_002524752.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223535936|gb|EEF37595.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 560

 Score = 38.9 bits (89), Expect(3) = 4e-07
 Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 25/106 (23%)
 Frame = +3

Query: 219 C*KLAGCDRALRSFRCQPTFARD-------------------------ERERAS*EKNNP 323
           C +  G  R L   RCQ ++ R+                         E E     + NP
Sbjct: 109 CERQEGQQRTLCRRRCQESYEREREREEEGGRGEREHGREKGGGRGGKEEETNEEAEENP 168

Query: 324 DVFEEQHFTSLIFMDHG*CSFLRNFTPDRSSLRGIKTSRVRFLNLN 461
            VF+   FT  +  +HG  S L  FT     LRGI+  RV  L  N
Sbjct: 169 YVFDTDQFTEKVRTEHGSISVLPRFTKKSKLLRGIENYRVGILKAN 214



 Score = 32.0 bits (71), Expect(3) = 4e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 446 ILESELHTFASPGHWYADGVLSVSSCRG 529
           IL++   TF +P HW AD VL V+  RG
Sbjct: 210 ILKANPQTFVAPSHWDADAVLVVAKGRG 237



 Score = 29.6 bits (65), Expect(3) = 4e-07
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +1

Query: 16  LAPAKRAP*LVDGLHHCLVQRHCNEGDKKACDSSLNYYWMNKKG*EHLKKDEKKKNNPRG 195
           LA A   P L    H C VQR   E  K+ C      Y+  K+     ++ E +     G
Sbjct: 19  LAQATTDPELKQCKHQCKVQRQYGEDQKRQCMRRCEEYYREKERERERREGEGEGEGEGG 78

Query: 196 G*ETG 210
           G  +G
Sbjct: 79  GRGSG 83


>gb|ABO36677.1| vicilin [Pistacia vera]
          Length = 519

 Score = 44.7 bits (104), Expect(2) = 5e-07
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 19/101 (18%)
 Frame = +3

Query: 234 GCDRALRSFRCQPTFARDERERA---------------S*EKNNPDVFEEQHFTSLIFMD 368
           G  + L  FRCQ  + ++ RE +                 E  NP VFE++HFT+ +  +
Sbjct: 84  GQQKQLCRFRCQEKYKKERREHSYSRDEEEEEEGDEEQEEEDENPYVFEDEHFTTRVKTE 143

Query: 369 HG*CSFLRNFTPDRSSLRGIKTSRVRFLNLN----CIPLHL 479
            G    L  FT     LRG++  R+ FL  N     +P H+
Sbjct: 144 QGKVVVLPKFTKRSKLLRGLEKYRLAFLVANPQAFVVPNHM 184



 Score = 36.2 bits (82), Expect(2) = 5e-07
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 28  KRAP*LVDGLHHCLVQRHCNEGDKKACDSSLNYYWMNKKG*EHLKKDEKKKNNPRG 195
           K  P L    H C VQR  +E  K+ C      Y+  KKG E  +++E++  + RG
Sbjct: 1   KTDPELKQCKHQCKVQRQYDEEQKEQCAKGCEKYYKEKKGREQEEEEEEEWGSGRG 56


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