BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046256
         (853 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1211235P rpoC-like ORF 236                                       169   3e-46
pir||A05030 rpoC protein homolog - common tobacco chloroplast         169   1e-45
ref|XP_004174090.1| PREDICTED: DNA-directed RNA polymerase subun...   172   7e-45
emb|CAN83637.1| hypothetical protein VITISV_032940 [Vitis vinifera]   167   6e-43
ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN7...   177   4e-42
ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, pa...   176   7e-42
ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasili...   175   2e-41
ref|XP_002519783.1| DNA-directed RNA polymerase beta chain, puta...   166   3e-41
ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus co...   174   4e-41
ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot escul...   174   4e-41
sp|Q9THV5.1|RPOC2_SINAL RecName: Full=DNA-directed RNA polymeras...   173   6e-41
ref|XP_002304127.1| predicted protein [Populus trichocarpa]           166   7e-41
ref|YP_008578163.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008578078.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008577398.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008577313.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008577228.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008577143.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008577058.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41
ref|YP_008576888.1| RNA polymerase beta'' subunit (chloroplast) ...   173   8e-41

>prf||1211235P rpoC-like ORF 236
          Length = 236

 Score =  169 bits (427), Expect(2) = 3e-46
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNK I+GTA+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 49  EVLMAERANLVFHNKAINGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 108

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 109 GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 141



 Score = 43.9 bits (102), Expect(2) = 3e-46
 Identities = 22/50 (44%), Positives = 29/50 (58%)
 Frame = -1

Query: 427 FYDIRMNSDLSGSTRTVAXXXXXXXXXXXXKFPISDSNPLSNPTQQSIEM 278
           FYD R  S LSGS R++              F I+DSNPLSN TQ+++E+
Sbjct: 1   FYDTRGTSGLSGSARSIVPEFIRESRSIKGSFTITDSNPLSNSTQRNMEV 50


>pir||A05030 rpoC protein homolog - common tobacco chloroplast
          Length = 236

 Score =  169 bits (427), Expect(2) = 1e-45
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNK I+GTA+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 49  EVLMAERANLVFHNKAINGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 108

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 109 GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 141



 Score = 41.6 bits (96), Expect(2) = 1e-45
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -1

Query: 424 YDIRMNSDLSGSTRTVAXXXXXXXXXXXXKFPISDSNPLSNPTQQSIEM 278
           YD R  S LSGS R++              F I+DSNPLSN TQ+++E+
Sbjct: 2   YDTRGTSGLSGSARSIVPEFIRESRSIKGSFTITDSNPLSNSTQRNMEV 50


>ref|XP_004174090.1| PREDICTED: DNA-directed RNA polymerase subunit beta''-like [Cucumis
           sativus]
          Length = 326

 Score =  172 bits (435), Expect(2) = 7e-45
 Identities = 85/93 (91%), Positives = 88/93 (94%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER  LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSISL
Sbjct: 44  EVLMAERADLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQLKTLGFQQATATSISL 103

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 104 GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 136



 Score = 36.2 bits (82), Expect(2) = 7e-45
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = -1

Query: 412 MNSDLSGSTRTVAXXXXXXXXXXXXKFPISDSNPLSNPTQQSIEM 278
           MN  LSGSTRT+              F I +SN LSNPTQ+++E+
Sbjct: 1   MNFVLSGSTRTIGPEFLRESRSRKGSFLIINSNLLSNPTQRNMEV 45


>emb|CAN83637.1| hypothetical protein VITISV_032940 [Vitis vinifera]
          Length = 203

 Score =  167 bits (422), Expect(3) = 6e-43
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 278 VYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLG 99
           V   ER +LVFHNKVIDGTA+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLG
Sbjct: 109 VLMTERANLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLG 168

Query: 98  IDDLLTIPSKGWLVQDAEQQSLILEKHYHY 9
           IDDLLTIPSKGWLVQDAEQQSLILEKH+HY
Sbjct: 169 IDDLLTIPSKGWLVQDAEQQSLILEKHHHY 198



 Score = 28.5 bits (62), Expect(3) = 6e-43
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 334 FPISDSNPLSNPTQQSI 284
           F  +DSNPLSNPTQ+++
Sbjct: 91  FTTTDSNPLSNPTQRNM 107



 Score = 26.9 bits (58), Expect(3) = 6e-43
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -2

Query: 369 EFLRESRSRKGNF 331
           EFLRE+RSRKG+F
Sbjct: 79  EFLREARSRKGSF 91


>ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN72682.1| rpoC2 [Jatropha
           curcas]
          Length = 1394

 Score =  177 bits (449), Expect = 4e-42
 Identities = 88/93 (94%), Positives = 90/93 (96%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V  +ER SLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 94


>ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
            truncatula] gi|355506662|gb|AES87804.1| DNA-directed RNA
            polymerase subunit beta, partial [Medicago truncatula]
          Length = 2049

 Score =  176 bits (447), Expect = 7e-42
 Identities = 95/144 (65%), Positives = 109/144 (75%), Gaps = 8/144 (5%)
 Frame = -3

Query: 410  EFRSLWVN*DRSSLNFYANQDQ-------EKEISNQ*LKSIVEPYSAEYR-DVYSLERPS 255
            E R +++      ++FY   ++       +++ SN  LK IVEP   E+  +V   ER +
Sbjct: 1122 EIRCIYIRTTVGHISFYREIEEAIQGFSRKRKFSNHSLKFIVEPNPTEWNMEVLMAERAN 1181

Query: 254  LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIP 75
            LVFHN VI GTAIKRLISRLIDHFGMAYTSHILDQVKTLGF+QATATSISLGIDDLLTIP
Sbjct: 1182 LVFHNNVIGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIP 1241

Query: 74   SKGWLVQDAEQQSLILEKHYHYGN 3
            SKGWLVQDAEQQS ILEKH HYGN
Sbjct: 1242 SKGWLVQDAEQQSSILEKHNHYGN 1265


>ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasiliensis]
           gi|308523496|gb|ADO33546.1| RNA polymerase beta''
           subunit [Hevea brasiliensis]
          Length = 1395

 Score =  175 bits (444), Expect = 2e-41
 Identities = 87/93 (93%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 94


>ref|XP_002519783.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
           gi|223541022|gb|EEF42579.1| DNA-directed RNA polymerase
           beta chain, putative [Ricinus communis]
          Length = 349

 Score =  166 bits (419), Expect(2) = 3e-41
 Identities = 83/93 (89%), Positives = 87/93 (93%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   +R +LVFHNKVID TAIKRLISRLID+FGMAYTSHILDQVKTLGFQQATA SISL
Sbjct: 197 EVLMAKRANLVFHNKVIDRTAIKRLISRLIDNFGMAYTSHILDQVKTLGFQQATAISISL 256

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN
Sbjct: 257 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 289



 Score = 30.0 bits (66), Expect(2) = 3e-41
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = -1

Query: 334 FPISDSNPLSNPTQQSIEM 278
           FPI DSNPLSN T++++E+
Sbjct: 180 FPIIDSNPLSNSTRRNMEV 198


>ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus communis]
           gi|339516155|gb|AEJ82545.1| RNA polymerase beta subunit
           [Ricinus communis]
          Length = 1405

 Score =  174 bits (440), Expect = 4e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   +R +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAKRANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 94


>ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot esculenta]
           gi|212288328|sp|B1NWE0.1|RPOC2_MANES RecName:
           Full=DNA-directed RNA polymerase subunit beta'';
           AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
           polymerase subunit beta''; Short=RNA polymerase subunit
           beta'' gi|157695875|gb|ABV66144.1| RNA polymerase beta
           subunit [Manihot esculenta]
          Length = 1393

 Score =  174 bits (440), Expect = 4e-41
 Identities = 86/93 (92%), Positives = 88/93 (94%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNK IDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERANLVFHNKAIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 94


>sp|Q9THV5.1|RPOC2_SINAL RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta''; Short=RNA polymerase subunit beta''
           gi|5725463|emb|CAB48415.2| RNA polymerase A beta prime
           prime subunit [Sinapis alba]
          Length = 1384

 Score =  173 bits (439), Expect = 6e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|XP_002304127.1| predicted protein [Populus trichocarpa]
          Length = 345

 Score =  166 bits (421), Expect(2) = 7e-41
 Identities = 81/93 (87%), Positives = 86/93 (92%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V+  ER +L FHNKVIDGTAIKR+ISR IDHFGMAYTSHILDQVKTLGF QATATSISL
Sbjct: 65  EVFMAERANLFFHNKVIDGTAIKRIISRFIDHFGMAYTSHILDQVKTLGFHQATATSISL 124

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQ LILEKH+HYGN
Sbjct: 125 GIDDLLTIPSKGWLVQDAEQQILILEKHHHYGN 157



 Score = 28.1 bits (61), Expect(2) = 7e-41
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 403 DLSGSTRTVAXXXXXXXXXXXXKFPISDSNPLSNPTQQSIEM 278
           DL G+TRT+              FP  +SN LS+P  +++E+
Sbjct: 25  DLFGATRTIVPEFLRKSRLRKGSFPSINSNLLSSPIHRNMEV 66


>ref|YP_008578163.1| RNA polymerase beta'' subunit (chloroplast) [Stockwellia
           quadrifida] gi|442569411|gb|AGC59572.1| RNA polymerase
           beta'' subunit (chloroplast) [Stockwellia quadrifida]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008578078.1| RNA polymerase beta'' subunit (chloroplast) [Allosyncarpia ternata]
           gi|442569325|gb|AGC59487.1| RNA polymerase beta''
           subunit (chloroplast) [Allosyncarpia ternata]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008577398.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus guilfoylei]
           gi|442568637|gb|AGC58807.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus guilfoylei]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008577313.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus microcorys]
           gi|442568551|gb|AGC58722.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus microcorys]
          Length = 1394

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008577228.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus
           salmonophloia] gi|442568465|gb|AGC58637.1| RNA
           polymerase beta'' subunit (chloroplast) [Eucalyptus
           salmonophloia]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008577143.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus
           diversicolor] gi|442568379|gb|AGC58552.1| RNA polymerase
           beta'' subunit (chloroplast) [Eucalyptus diversicolor]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008577058.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus torquata]
           gi|442568293|gb|AGC58467.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus torquata]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94


>ref|YP_008576888.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus deglupta]
           gi|545718127|ref|YP_008576973.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus spathulata]
           gi|442568121|gb|AGC58297.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus deglupta]
           gi|442568207|gb|AGC58382.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus spathulata]
          Length = 1392

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -3

Query: 281 DVYSLERPSLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 102
           +V   ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL
Sbjct: 2   EVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISL 61

Query: 101 GIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGN 3
           GIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGN
Sbjct: 62  GIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGN 94