BLASTX nr result
ID: Jatropha_contig00046202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00046202
(295 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|1... 103 1e-22
ref|XP_004287613.1| PREDICTED: 40S ribosomal protein S3-3-like [... 103 1e-22
gb|EOY30019.1| Ribosomal protein S3 family protein [Theobroma ca... 101 5e-22
ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group] g... 108 9e-22
gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group] 108 9e-22
gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Or... 108 9e-22
gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays] 107 2e-21
gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays] 107 2e-21
ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [S... 106 3e-21
ref|XP_004972758.1| PREDICTED: 40S ribosomal protein S3-3-like [... 106 3e-21
gb|ACN36277.1| unknown [Zea mays] gi|413917293|gb|AFW57225.1| hy... 106 3e-21
gb|ACG44817.1| hypothetical protein [Zea mays] gi|413917295|gb|A... 106 3e-21
ref|NP_001149150.1| LOC100282772 [Zea mays] gi|195625100|gb|ACG3... 106 3e-21
gb|EPS57828.1| hypothetical protein M569_16988, partial [Genlise... 100 6e-21
gb|EPS60866.1| hypothetical protein M569_13935, partial [Genlise... 100 6e-21
gb|ERN16084.1| hypothetical protein AMTR_s00030p00157370 [Ambore... 105 8e-21
ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|2... 105 8e-21
gb|ERN11212.1| hypothetical protein AMTR_s00024p00219330 [Ambore... 104 1e-20
ref|XP_004303473.1| PREDICTED: 40S ribosomal protein S3-3-like i... 104 1e-20
ref|XP_004303472.1| PREDICTED: 40S ribosomal protein S3-3-like i... 104 1e-20
>ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|118483222|gb|ABK93514.1|
unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus
trichocarpa] gi|222865629|gb|EEF02760.1| 40S ribosomal
protein S3 [Populus trichocarpa]
Length = 234
Score = 103 bits (257), Expect(2) = 1e-22
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 151
KFKDGYMISSGQPV EYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP
Sbjct: 151 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200
Score = 28.5 bits (62), Expect(2) = 1e-22
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 136 GQGRTMTPLPDLVTIH-XXXXXXXXXXXXLTTNIEI 240
G+ MTPLPDLVTIH +T NIEI
Sbjct: 196 GKVGPMTPLPDLVTIHPPKEDEEYVAPPVMTANIEI 231
>ref|XP_004287613.1| PREDICTED: 40S ribosomal protein S3-3-like [Fragaria vesca subsp.
vesca]
Length = 249
Score = 103 bits (257), Expect(2) = 1e-22
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 151
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK GP
Sbjct: 153 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 202
Score = 28.1 bits (61), Expect(2) = 1e-22
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 136 GQGRTMTPLPDLVTIH 183
G+ MTPLPDLVTIH
Sbjct: 198 GKQGPMTPLPDLVTIH 213
>gb|EOY30019.1| Ribosomal protein S3 family protein [Theobroma cacao]
Length = 239
Score = 101 bits (252), Expect(2) = 5e-22
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 151
KFKDGYMISSG PVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK GP
Sbjct: 151 KFKDGYMISSGHPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200
Score = 28.1 bits (61), Expect(2) = 5e-22
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 136 GQGRTMTPLPDLVTIH 183
G+ MTPLPDLVTIH
Sbjct: 196 GKQGPMTPLPDLVTIH 211
>ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein
[Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3,
putative, expressed [Oryza sativa Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa
Japonica Group] gi|125544608|gb|EAY90747.1| hypothetical
protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein
OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 228
Score = 108 bits (269), Expect = 9e-22
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTPLPDLVTI 210
Query: 182 ILPRKKKSM 208
P++++ +
Sbjct: 211 HAPKEEEEL 219
>gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 108 bits (269), Expect = 9e-22
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 31 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTPLPDLVTI 90
Query: 182 ILPRKKKSM 208
P++++ +
Sbjct: 91 HAPKEEEEL 99
>gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 108 bits (269), Expect = 9e-22
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 128 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTPLPDLVTI 187
Query: 182 ILPRKKKSM 208
P++++ +
Sbjct: 188 HAPKEEEEL 196
>gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 107 bits (267), Expect = 2e-21
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVTI 210
Query: 182 ILPRKKKSM 208
P+++ +
Sbjct: 211 HTPKEEDEL 219
>gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 107 bits (267), Expect = 2e-21
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVTI 210
Query: 182 ILPRKKKSM 208
P+++ +
Sbjct: 211 HTPKEEDEL 219
>ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein
SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 106 bits (265), Expect = 3e-21
Identities = 53/69 (76%), Positives = 56/69 (81%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVTI 210
Query: 182 ILPRKKKSM 208
P+ + +
Sbjct: 211 HTPKDEDEL 219
>ref|XP_004972758.1| PREDICTED: 40S ribosomal protein S3-3-like [Setaria italica]
Length = 228
Score = 106 bits (264), Expect = 3e-21
Identities = 52/69 (75%), Positives = 57/69 (82%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK+GP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPITPLPDLVTI 210
Query: 182 ILPRKKKSM 208
P+++ +
Sbjct: 211 HAPKEEDEL 219
>gb|ACN36277.1| unknown [Zea mays] gi|413917293|gb|AFW57225.1| hypothetical protein
ZEAMMB73_370294 [Zea mays] gi|413917294|gb|AFW57226.1|
hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 103
Score = 106 bits (264), Expect = 3e-21
Identities = 53/64 (82%), Positives = 54/64 (84%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 25 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVTI 84
Query: 182 ILPR 193
P+
Sbjct: 85 HTPK 88
>gb|ACG44817.1| hypothetical protein [Zea mays] gi|413917295|gb|AFW57227.1|
hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 80
Score = 106 bits (264), Expect = 3e-21
Identities = 53/64 (82%), Positives = 54/64 (84%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVTI 61
Query: 182 ILPR 193
P+
Sbjct: 62 HTPK 65
>ref|NP_001149150.1| LOC100282772 [Zea mays] gi|195625100|gb|ACG34380.1| 40S ribosomal
protein S3 [Zea mays] gi|223947389|gb|ACN27778.1|
unknown [Zea mays] gi|223972753|gb|ACN30564.1| unknown
[Zea mays] gi|413917290|gb|AFW57222.1| 40S ribosomal
protein S3 [Zea mays]
Length = 229
Score = 106 bits (264), Expect = 3e-21
Identities = 53/64 (82%), Positives = 54/64 (84%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVTI 210
Query: 182 ILPR 193
P+
Sbjct: 211 HTPK 214
>gb|EPS57828.1| hypothetical protein M569_16988, partial [Genlisea aurea]
Length = 221
Score = 100 bits (248), Expect(2) = 6e-21
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 151
KFKDGYMISSGQPV EYID+AVRHVLLRQGVLGIKVKIMLDWDPKGK GP
Sbjct: 151 KFKDGYMISSGQPVKEYIDTAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 200
Score = 26.2 bits (56), Expect(2) = 6e-21
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 139 QGRTMTPLPDLVTIH 183
QG T TPLPDLVTIH
Sbjct: 198 QGPT-TPLPDLVTIH 211
>gb|EPS60866.1| hypothetical protein M569_13935, partial [Genlisea aurea]
Length = 84
Score = 100 bits (248), Expect(2) = 6e-21
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 151
KFKDGYMISSGQPV EYID+AVRHVLLRQGVLGIKVKIMLDWDPKGK GP
Sbjct: 4 KFKDGYMISSGQPVKEYIDTAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP 53
Score = 26.2 bits (56), Expect(2) = 6e-21
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 139 QGRTMTPLPDLVTIH 183
QG T TPLPDLVTIH
Sbjct: 51 QGPT-TPLPDLVTIH 64
>gb|ERN16084.1| hypothetical protein AMTR_s00030p00157370 [Amborella trichopoda]
Length = 233
Score = 105 bits (261), Expect = 8e-21
Identities = 52/67 (77%), Positives = 56/67 (83%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK GP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTI 210
Query: 182 ILPRKKK 202
P++++
Sbjct: 211 HTPKEEE 217
>ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1|
40S ribosomal protein S3 [Populus trichocarpa]
Length = 233
Score = 105 bits (261), Expect = 8e-21
Identities = 55/78 (70%), Positives = 61/78 (78%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPV EYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP P L
Sbjct: 151 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTI 210
Query: 182 ILPRKKKSMSLQY*QPIL 235
P++++ +Y P+L
Sbjct: 211 HPPKEEE----EYVPPLL 224
>gb|ERN11212.1| hypothetical protein AMTR_s00024p00219330 [Amborella trichopoda]
Length = 233
Score = 104 bits (260), Expect = 1e-20
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK GP P L
Sbjct: 151 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTI 210
Query: 182 ILPRKK 199
P+++
Sbjct: 211 HTPKEE 216
>ref|XP_004303473.1| PREDICTED: 40S ribosomal protein S3-3-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 248
Score = 104 bits (260), Expect = 1e-20
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK GP P L
Sbjct: 154 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTI 213
Query: 182 ILPRKK 199
P+++
Sbjct: 214 HTPKEE 219
>ref|XP_004303472.1| PREDICTED: 40S ribosomal protein S3-3-like isoform 1 [Fragaria
vesca subsp. vesca]
Length = 261
Score = 104 bits (260), Expect = 1e-20
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = +2
Query: 2 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP*HHCPILSPF 181
KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGK GP P L
Sbjct: 167 KFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTI 226
Query: 182 ILPRKK 199
P+++
Sbjct: 227 HTPKEE 232