BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00046023
         (757 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, pa...   322   8e-86
ref|XP_004174090.1| PREDICTED: DNA-directed RNA polymerase subun...   284   3e-81
prf||1211235P rpoC-like ORF 236                                       286   1e-80
pir||A05030 rpoC protein homolog - common tobacco chloroplast         286   6e-80
ref|XP_002519783.1| DNA-directed RNA polymerase beta chain, puta...   285   8e-75
ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN7...   276   4e-72
ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasili...   271   1e-70
ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus co...   270   3e-70
ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot escul...   270   3e-70
gb|AFR25650.1| RNA polymerase beta' subunit (chloroplast) [Penth...   265   9e-69
gb|AFU94788.1| RpoC2, partial (chloroplast) [Euphorbia maculata]      265   9e-69
ref|YP_008578078.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008577398.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008577313.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008577228.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008577143.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008577058.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008576888.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008576803.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68
ref|YP_008576378.1| RNA polymerase beta'' subunit (chloroplast) ...   265   1e-68

>ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
            truncatula] gi|355506662|gb|AES87804.1| DNA-directed RNA
            polymerase subunit beta, partial [Medicago truncatula]
          Length = 2049

 Score =  322 bits (825), Expect = 8e-86
 Identities = 172/244 (70%), Positives = 184/244 (75%)
 Frame = +1

Query: 1    TYHEIYEHYLIVRNIKKEIICIYIRTTVGHISFYREIEEAIQGFCQACSDGI*SDLS*VI 180
            TY+EIY HYL++R+IKKEI CIYIRTTVGHISFYREIEEAIQGF +              
Sbjct: 1105 TYYEIYGHYLVIRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRK------------- 1151

Query: 181  L*HRHEFRSLWFN*DXXXXXXXXXXXXXXXFPISDSNPLSNPTQQNMEVLMVERASLVFH 360
               +    SL F  +                         NPT+ NMEVLM ERA+LVFH
Sbjct: 1152 --RKFSNHSLKFIVEP------------------------NPTEWNMEVLMAERANLVFH 1185

Query: 361  NKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGW 540
            N VI GTAIKRLISRLIDHFGMAYTSHILDQVKTLGF+QATATSISLGIDDLLTIPSKGW
Sbjct: 1186 NNVIGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPSKGW 1245

Query: 541  LVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMNLNFRMTEPFNPVHI 720
            LVQDAEQQS ILEKH HYGNVH VEKLRQSIE+WYATSEYLRQEMN NFRMT+PFNPVHI
Sbjct: 1246 LVQDAEQQSSILEKHNHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHI 1305

Query: 721  MSFS 732
            MSFS
Sbjct: 1306 MSFS 1309


>ref|XP_004174090.1| PREDICTED: DNA-directed RNA polymerase subunit beta''-like [Cucumis
           sativus]
          Length = 326

 Score =  284 bits (727), Expect(3) = 3e-81
 Identities = 141/154 (91%), Positives = 147/154 (95%)
 Frame = +1

Query: 271 FPISDSNPLSNPTQQNMEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD 450
           F I +SN LSNPTQ+NMEVLM ERA LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD
Sbjct: 27  FLIINSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD 86

Query: 451 QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQS 630
           Q+KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQS
Sbjct: 87  QLKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQS 146

Query: 631 IEVWYATSEYLRQEMNLNFRMTEPFNPVHIMSFS 732
           IE+WYATSEYLRQEMN NFRMT+PFNPVHIMSFS
Sbjct: 147 IEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFS 180



 Score = 44.7 bits (104), Expect(3) = 3e-81
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +2

Query: 194 MNSDLFGSTRTVAPEFLRESRSRKGNF 274
           MN  L GSTRT+ PEFLRESRSRKG+F
Sbjct: 1   MNFVLSGSTRTIGPEFLRESRSRKGSF 27



 Score = 21.6 bits (44), Expect(3) = 3e-81
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 726 FFGARGNASQ 755
           F GARGNASQ
Sbjct: 179 FSGARGNASQ 188


>prf||1211235P rpoC-like ORF 236
          Length = 236

 Score =  286 bits (731), Expect(3) = 1e-80
 Identities = 140/154 (90%), Positives = 148/154 (96%)
 Frame = +1

Query: 271 FPISDSNPLSNPTQQNMEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD 450
           F I+DSNPLSN TQ+NMEVLM ERA+LVFHNK I+GTA+KRLISRLIDHFGMAYTSHILD
Sbjct: 32  FTITDSNPLSNSTQRNMEVLMAERANLVFHNKAINGTAMKRLISRLIDHFGMAYTSHILD 91

Query: 451 QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQS 630
           QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQS
Sbjct: 92  QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQS 151

Query: 631 IEVWYATSEYLRQEMNLNFRMTEPFNPVHIMSFS 732
           IE+WYATSEYLRQEMN NFRMT+PFNPVHIMSFS
Sbjct: 152 IEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFS 185



 Score = 41.2 bits (95), Expect(3) = 1e-80
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +2

Query: 179 FYDIGMNSDLFGSTRTVAPEFLRESRSRKGNF 274
           FYD    S L GS R++ PEF+RESRS KG+F
Sbjct: 1   FYDTRGTSGLSGSARSIVPEFIRESRSIKGSF 32



 Score = 21.6 bits (44), Expect(3) = 1e-80
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 726 FFGARGNASQ 755
           F GARGNASQ
Sbjct: 184 FSGARGNASQ 193


>pir||A05030 rpoC protein homolog - common tobacco chloroplast
          Length = 236

 Score =  286 bits (731), Expect(3) = 6e-80
 Identities = 140/154 (90%), Positives = 148/154 (96%)
 Frame = +1

Query: 271 FPISDSNPLSNPTQQNMEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD 450
           F I+DSNPLSN TQ+NMEVLM ERA+LVFHNK I+GTA+KRLISRLIDHFGMAYTSHILD
Sbjct: 32  FTITDSNPLSNSTQRNMEVLMAERANLVFHNKAINGTAMKRLISRLIDHFGMAYTSHILD 91

Query: 451 QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQS 630
           QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQS
Sbjct: 92  QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQS 151

Query: 631 IEVWYATSEYLRQEMNLNFRMTEPFNPVHIMSFS 732
           IE+WYATSEYLRQEMN NFRMT+PFNPVHIMSFS
Sbjct: 152 IEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFS 185



 Score = 38.9 bits (89), Expect(3) = 6e-80
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +2

Query: 182 YDIGMNSDLFGSTRTVAPEFLRESRSRKGNF 274
           YD    S L GS R++ PEF+RESRS KG+F
Sbjct: 2   YDTRGTSGLSGSARSIVPEFIRESRSIKGSF 32



 Score = 21.6 bits (44), Expect(3) = 6e-80
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 726 FFGARGNASQ 755
           F GARGNASQ
Sbjct: 184 FSGARGNASQ 193


>ref|XP_002519783.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
           gi|223541022|gb|EEF42579.1| DNA-directed RNA polymerase
           beta chain, putative [Ricinus communis]
          Length = 349

 Score =  285 bits (730), Expect = 8e-75
 Identities = 141/154 (91%), Positives = 148/154 (96%)
 Frame = +1

Query: 271 FPISDSNPLSNPTQQNMEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILD 450
           FPI DSNPLSN T++NMEVLM +RA+LVFHNKVID TAIKRLISRLID+FGMAYTSHILD
Sbjct: 180 FPIIDSNPLSNSTRRNMEVLMAKRANLVFHNKVIDRTAIKRLISRLIDNFGMAYTSHILD 239

Query: 451 QVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQS 630
           QVKTLGFQQATA SISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVH VEKLRQS
Sbjct: 240 QVKTLGFQQATAISISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHAVEKLRQS 299

Query: 631 IEVWYATSEYLRQEMNLNFRMTEPFNPVHIMSFS 732
           IE+WYATSEYLRQE+NLNFRMTEPFNPVHIMSFS
Sbjct: 300 IEIWYATSEYLRQEVNLNFRMTEPFNPVHIMSFS 333


>ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN72682.1| rpoC2 [Jatropha
           curcas]
          Length = 1394

 Score =  276 bits (707), Expect = 4e-72
 Identities = 138/138 (100%), Positives = 138/138 (100%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
           LNFRMTEPFNPVHIMSFS
Sbjct: 121 LNFRMTEPFNPVHIMSFS 138


>ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasiliensis]
           gi|308523496|gb|ADO33546.1| RNA polymerase beta''
           subunit [Hevea brasiliensis]
          Length = 1395

 Score =  271 bits (694), Expect = 1e-70
 Identities = 133/138 (96%), Positives = 136/138 (98%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ERA+LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVH +EKLRQSIE+WYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHAIEKLRQSIEIWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
           LNFRMTEPFNPVHIMSFS
Sbjct: 121 LNFRMTEPFNPVHIMSFS 138


>ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus communis]
           gi|339516155|gb|AEJ82545.1| RNA polymerase beta subunit
           [Ricinus communis]
          Length = 1405

 Score =  270 bits (691), Expect = 3e-70
 Identities = 133/138 (96%), Positives = 136/138 (98%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM +RA+LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAKRANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVH VEKLRQSIE+WYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
           LNFRMTEPFNPVHIMSFS
Sbjct: 121 LNFRMTEPFNPVHIMSFS 138


>ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot esculenta]
           gi|212288328|sp|B1NWE0.1|RPOC2_MANES RecName:
           Full=DNA-directed RNA polymerase subunit beta'';
           AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
           polymerase subunit beta''; Short=RNA polymerase subunit
           beta'' gi|157695875|gb|ABV66144.1| RNA polymerase beta
           subunit [Manihot esculenta]
          Length = 1393

 Score =  270 bits (691), Expect = 3e-70
 Identities = 133/138 (96%), Positives = 135/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ERA+LVFHNK IDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERANLVFHNKAIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVH VEKLRQSIE+WYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
           LNFRMTEPFNPVHIMSFS
Sbjct: 121 LNFRMTEPFNPVHIMSFS 138


>gb|AFR25650.1| RNA polymerase beta' subunit (chloroplast) [Penthorum chinense]
          Length = 1387

 Score =  265 bits (678), Expect = 9e-69
 Identities = 131/138 (94%), Positives = 135/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ERA+LVFHNKVIDGTA+KRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERANLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>gb|AFU94788.1| RpoC2, partial (chloroplast) [Euphorbia maculata]
          Length = 1630

 Score =  265 bits (678), Expect = 9e-69
 Identities = 134/144 (93%), Positives = 136/144 (94%), Gaps = 6/144 (4%)
 Frame = +1

Query: 319 MEVLMVERA------SLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQA 480
           MEVLM ERA      +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQA
Sbjct: 1   MEVLMAERAXXXXXXNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQA 60

Query: 481 TATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEY 660
           TATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVH VEKLRQSIE+WYATSEY
Sbjct: 61  TATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHAVEKLRQSIEIWYATSEY 120

Query: 661 LRQEMNLNFRMTEPFNPVHIMSFS 732
           LRQEMNLNFRMTEPFNPVHIMSFS
Sbjct: 121 LRQEMNLNFRMTEPFNPVHIMSFS 144


>ref|YP_008578078.1| RNA polymerase beta'' subunit (chloroplast) [Allosyncarpia ternata]
           gi|442569325|gb|AGC59487.1| RNA polymerase beta''
           subunit (chloroplast) [Allosyncarpia ternata]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008577398.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus guilfoylei]
           gi|442568637|gb|AGC58807.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus guilfoylei]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008577313.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus microcorys]
           gi|442568551|gb|AGC58722.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus microcorys]
          Length = 1394

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008577228.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus
           salmonophloia] gi|442568465|gb|AGC58637.1| RNA
           polymerase beta'' subunit (chloroplast) [Eucalyptus
           salmonophloia]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008577143.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus
           diversicolor] gi|442568379|gb|AGC58552.1| RNA polymerase
           beta'' subunit (chloroplast) [Eucalyptus diversicolor]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008577058.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus torquata]
           gi|442568293|gb|AGC58467.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus torquata]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008576888.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus deglupta]
           gi|545718127|ref|YP_008576973.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus spathulata]
           gi|442568121|gb|AGC58297.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus deglupta]
           gi|442568207|gb|AGC58382.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus spathulata]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008576803.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus
           camaldulensis] gi|442568035|gb|AGC58212.1| RNA
           polymerase beta'' subunit (chloroplast) [Eucalyptus
           camaldulensis]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138


>ref|YP_008576378.1| RNA polymerase beta'' subunit (chloroplast) [Eucalyptus
           polybractea] gi|545717611|ref|YP_008576463.1| RNA
           polymerase beta'' subunit (chloroplast) [Eucalyptus
           cladocalyx] gi|442567347|gb|AGC57532.1| RNA polymerase
           beta'' subunit (chloroplast) [Eucalyptus melliodora]
           gi|442567519|gb|AGC57702.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus polybractea]
           gi|442567605|gb|AGC57787.1| RNA polymerase beta''
           subunit (chloroplast) [Eucalyptus cladocalyx]
          Length = 1392

 Score =  265 bits (677), Expect = 1e-68
 Identities = 131/138 (94%), Positives = 134/138 (97%)
 Frame = +1

Query: 319 MEVLMVERASLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 498
           MEVLM ER +LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS
Sbjct: 1   MEVLMAERVNLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60

Query: 499 LGIDDLLTIPSKGWLVQDAEQQSLILEKHYHYGNVHVVEKLRQSIEVWYATSEYLRQEMN 678
           LGIDDLLTIPSKGWLVQDAEQQSLILEKH+HYGNVH VEKLRQSIEVWYATSEYLRQEMN
Sbjct: 61  LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEVWYATSEYLRQEMN 120

Query: 679 LNFRMTEPFNPVHIMSFS 732
            NFRMT+PFNPVHIMSFS
Sbjct: 121 PNFRMTDPFNPVHIMSFS 138