BLASTX nr result
ID: Jatropha_contig00045952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00045952
(943 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE93976.2| hypothetical protein POPTR_0005s27390g [Populus t... 52 2e-10
ref|XP_002301918.1| high mobility group family [Populus trichoca... 49 2e-09
gb|ERP63932.1| hypothetical protein POPTR_0002s01000g [Populus t... 49 2e-09
gb|ABK95882.1| unknown [Populus trichocarpa] 49 2e-09
gb|EOY15292.1| High mobility group B2, BETA 1,NFD2,NFD02 isoform... 45 6e-09
gb|ESQ34726.1| hypothetical protein EUTSA_v10009970mg, partial [... 46 1e-08
dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila] 46 1e-08
ref|XP_006303878.1| hypothetical protein CARUB_v10012681mg [Caps... 44 4e-08
ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arab... 44 4e-08
gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirs... 44 5e-08
gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirs... 43 5e-08
gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana] 45 1e-07
ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis ... 44 1e-07
ref|NP_564124.1| high mobility group B3 protein [Arabidopsis tha... 44 1e-07
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ... 42 2e-07
gb|ESR48623.1| hypothetical protein CICLE_v10002782mg [Citrus cl... 42 2e-07
gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirs... 42 2e-07
gb|ESR48621.1| hypothetical protein CICLE_v10002782mg [Citrus cl... 42 2e-07
ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis ... 45 3e-07
ref|NP_564123.1| high mobility group B2 protein [Arabidopsis tha... 45 3e-07
>gb|EEE93976.2| hypothetical protein POPTR_0005s27390g [Populus trichocarpa]
Length = 159
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K FV+KA+KRK+ ++ KAYNK EGPKEE +SEK M EVN
Sbjct: 91 KAPFVAKADKRKVEYEKKMKAYNKEQAEGPKEEEESEKSMSEVN 134
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + ++ H K KS VGK GGDKW S+S+ EKA
Sbjct: 59 REQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKA 92
>ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| HMG 1 family protein
[Populus trichocarpa]
Length = 152
Score = 48.9 bits (115), Expect(2) = 2e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ ++ KAYNK EGPKEE +SEK + EVN
Sbjct: 90 KAPYVAKADKRKVEYEKKMKAYNKEQAEGPKEEEESEKSVSEVN 133
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GGDKW S+S EKA
Sbjct: 58 REQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKA 91
>gb|ERP63932.1| hypothetical protein POPTR_0002s01000g [Populus trichocarpa]
Length = 151
Score = 48.9 bits (115), Expect(2) = 2e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ ++ KAYNK EGPKEE +SEK + EVN
Sbjct: 90 KAPYVAKADKRKVEYEKKMKAYNKEQAEGPKEEEESEKSVSEVN 133
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GGDKW S+S EKA
Sbjct: 58 REQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKA 91
>gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 48.9 bits (115), Expect(2) = 2e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ ++ KAYNK EGPKEE +SEK + EVN
Sbjct: 90 KAPYVAKADKRKVEYEKKMKAYNKEQAEGPKEEEESEKSVSEVN 133
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GGDKW S+S EKA
Sbjct: 58 REQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKA 91
>gb|EOY15292.1| High mobility group B2, BETA 1,NFD2,NFD02 isoform 1 [Theobroma
cacao] gi|508723396|gb|EOY15293.1| High mobility group
B2, BETA 1,NFD2,NFD02 isoform 1 [Theobroma cacao]
Length = 147
Score = 44.7 bits (104), Expect(2) = 6e-09
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPK--EE*DSEKLMYEVN 276
K FV+KAEKRK+ + KAYNK EGPK +E +SEK + EVN
Sbjct: 86 KAPFVAKAEKRKVEYEKNMKAYNKRQAEGPKADDEEESEKSVSEVN 131
Score = 43.1 bits (100), Expect(2) = 6e-09
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GGDKW SMS+ EKA
Sbjct: 54 REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKA 87
>gb|ESQ34726.1| hypothetical protein EUTSA_v10009970mg, partial [Eutrema
salsugineum]
Length = 257
Score = 45.8 bits (107), Expect(2) = 1e-08
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 200 KAPYVAKAEKRKVDYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 243
Score = 40.8 bits (94), Expect(2) = 1e-08
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K H K KS VGK GDKW S+SD EKA
Sbjct: 168 RETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKA 201
>dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 45.8 bits (107), Expect(2) = 1e-08
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 85 KAPYVAKAEKRKVDYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 128
Score = 40.8 bits (94), Expect(2) = 1e-08
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K H K KS VGK GDKW S+SD EKA
Sbjct: 53 RETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKA 86
>ref|XP_006303878.1| hypothetical protein CARUB_v10012681mg [Capsella rubella]
gi|482572589|gb|EOA36776.1| hypothetical protein
CARUB_v10012681mg [Capsella rubella]
Length = 141
Score = 44.3 bits (103), Expect(2) = 4e-08
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 82 KAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 125
Score = 40.8 bits (94), Expect(2) = 4e-08
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K H K KS VGK GG+KW S+SD EKA
Sbjct: 50 RETYKKEHPKNKSVAAVGKAGGEKWKSLSDSEKA 83
>ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata] gi|297336244|gb|EFH66661.1| hypothetical protein
ARALYDRAFT_472304 [Arabidopsis lyrata subsp. lyrata]
Length = 141
Score = 44.3 bits (103), Expect(2) = 4e-08
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 84 KAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 127
Score = 40.8 bits (94), Expect(2) = 4e-08
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K H K KS VGK GG+KW S+SD EKA
Sbjct: 52 RETYKKEHPKNKSVAAVGKAGGEKWKSLSDSEKA 85
>gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 43.9 bits (102), Expect(2) = 5e-08
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKE-E*DSEKLMYEVN 276
K +V KAEKRK+ + KAYNK EGP+E E +SEK + EVN
Sbjct: 86 KRPYVDKAEKRKVEYEKNMKAYNKRQAEGPQEDEEESEKSVSEVN 130
Score = 40.8 bits (94), Expect(2) = 5e-08
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEK 406
R + +K H K KS VGK GGDKW S+S+ EK
Sbjct: 54 REQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEK 86
>gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 42.7 bits (99), Expect(2) = 5e-08
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPK-EE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EGPK E+ +S+K + EVN
Sbjct: 82 KAPYVAKAEKRKVEYEKNMKAYNKRQAEGPKDEDVESDKSVSEVN 126
Score = 42.0 bits (97), Expect(2) = 5e-08
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GGDKW S+S+ EKA
Sbjct: 50 REQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKA 83
>gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 44.3 bits (103), Expect(2) = 1e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 603 KAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 646
Score = 38.9 bits (89), Expect(2) = 1e-07
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R ++ H K KS VGK GG+KW S+SD EKA
Sbjct: 571 RVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKA 604
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 462 KAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVN 505
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K + K KS VGK GDKW S+SD EKA
Sbjct: 430 RETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 463
>ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3
protein [Arabidopsis thaliana]
Length = 140
Score = 44.3 bits (103), Expect(2) = 1e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 82 KAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 125
Score = 38.9 bits (89), Expect(2) = 1e-07
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R ++ H K KS VGK GG+KW S+SD EKA
Sbjct: 50 RVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKA 83
>ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High
mobility group B protein 3; AltName: Full=High mobility
group protein B 2; Short=AtHMGbeta2; Short=HMG beta 2;
AltName: Full=Nucleosome/chromatin assembly factor group
D 03; Short=Nucleosome/chromatin assembly factor group D
3 gi|15724174|gb|AAL06479.1|AF411789_1
At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis
thaliana] gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15
[Arabidopsis thaliana] gi|21537072|gb|AAM61413.1|
unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein
[Arabidopsis thaliana] gi|23198424|gb|AAN15739.1|
expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3
protein [Arabidopsis thaliana]
Length = 141
Score = 44.3 bits (103), Expect(2) = 1e-07
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KA+KRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 82 KAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 125
Score = 38.9 bits (89), Expect(2) = 1e-07
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R ++ H K KS VGK GG+KW S+SD EKA
Sbjct: 50 RVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKA 83
>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high
mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product
[Vitis vinifera]
Length = 153
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPK---EE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EG K EE +SEK + EVN
Sbjct: 91 KAPYVAKAEKRKVEYEKNMKAYNKKQAEGTKVVEEEDESEKSLSEVN 137
Score = 41.2 bits (95), Expect(2) = 2e-07
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + ++ H KS +VGK GGDKW SMS+ EKA
Sbjct: 59 RKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKA 92
>gb|ESR48623.1| hypothetical protein CICLE_v10002782mg [Citrus clementina]
Length = 148
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEG--PKEE*DSEKLMYEVN 276
K +V+KAEKRK+ ++ K YN+ EG P+EE +SEK M EVN
Sbjct: 85 KAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPEEEEESEKSMSEVN 130
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GG+KW SMS+ +KA
Sbjct: 53 REQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKA 86
>gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GG+KW S+SD EKA
Sbjct: 54 REQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKA 87
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPK-EE*DSEKLMYEVN 276
K +++KAEKRK+ + KAY K E PK EE +SEK + EVN
Sbjct: 86 KAPYIAKAEKRKVEYEKNMKAYTKRQAEAPKEEESESEKSVSEVN 130
>gb|ESR48621.1| hypothetical protein CICLE_v10002782mg [Citrus clementina]
gi|557537504|gb|ESR48622.1| hypothetical protein
CICLE_v10002782mg [Citrus clementina]
Length = 146
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEG--PKEE*DSEKLMYEVN 276
K +V+KAEKRK+ ++ K YN+ EG P+EE +SEK M EVN
Sbjct: 85 KAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPEEEEESEKSMSEVN 130
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R + +K H K KS VGK GG+KW SMS+ +KA
Sbjct: 53 REQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKA 86
>ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein
ARALYDRAFT_472301 [Arabidopsis lyrata subsp. lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein
ARALYDRAFT_472301 [Arabidopsis lyrata subsp. lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2
protein [Arabidopsis thaliana]
Length = 142
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 85 KAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVN 128
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K + K KS VGK GDKW S+SD EKA
Sbjct: 53 RETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86
>ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High
mobility group B protein 2; AltName: Full=High mobility
group protein B 1; Short=AtHMGbeta1; Short=HMG beta 1;
AltName: Full=Nucleosome/chromatin assembly factor group
D 02; Short=Nucleosome/chromatin assembly factor group D
2 gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein
[Arabidopsis thaliana] gi|2832359|emb|CAA74401.1| HMG
protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis
thaliana] gi|21536964|gb|AAM61305.1| unknown
[Arabidopsis thaliana] gi|26452113|dbj|BAC43146.1|
unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein
[Arabidopsis thaliana] gi|332191885|gb|AEE30006.1| high
mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -3
Query: 407 KHEFVSKAEKRKIGI*EERKAYNKGHGEGPKEE*DSEKLMYEVN 276
K +V+KAEKRK+ + KAYNK EGPKE+ +S+K + EVN
Sbjct: 85 KAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVN 128
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 504 RPRVEKVHRKYKSAQLVGKPGGDKWNSMSDVEKA 403
R +K + K KS VGK GDKW S+SD EKA
Sbjct: 53 RETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86