BLASTX nr result

ID: Jatropha_contig00045719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00045719
         (292 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549007.1| PREDICTED: uncharacterized protein LOC100791...    55   7e-08
ref|XP_003542256.1| PREDICTED: uncharacterized protein LOC100793...    49   3e-06
gb|EJS83737.1| hypothetical protein AAUPMC_20941, partial [Paste...    48   8e-06

>ref|XP_003549007.1| PREDICTED: uncharacterized protein LOC100791537 [Glycine max]
          Length = 1189

 Score = 54.7 bits (130), Expect(2) = 7e-08
 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +3

Query: 54  FCSYEIFVLFDLISGPLSYLLTHVPPHPNSPPELSSARIGRRNDLDLPGRPREIPMH-SP 230
           F  +EI VL +LI G L YLLT VPPHPNSPP+ +  R  R  + DL  + R  P + +P
Sbjct: 390 FVPHEISVLVELILGHLRYLLTDVPPHPNSPPD-NVFRPDRPAEADLGSKKRGTPTYPTP 448

Query: 231 GTEFPFTGLAFTTSGLEQP 287
              F   GL  +++G   P
Sbjct: 449 LKSFHKVGLESSSTGSSFP 467



 Score = 27.3 bits (59), Expect(2) = 7e-08
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 19  RAGNHNLTSFYAFVP 63
           R GN N TSFY FVP
Sbjct: 378 RTGNQNQTSFYPFVP 392


>ref|XP_003542256.1| PREDICTED: uncharacterized protein LOC100793251 [Glycine max]
          Length = 189

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +3

Query: 54  FCSYEIFVLFDLISGPLSYLLTHVPPHPNSPPELSSARIGRRNDLDLPGRPREIPMHSP- 230
           F  +EI VL +LI G L YLLT VPP PNSPP+          ++  P RP E  + S  
Sbjct: 66  FVPHEISVLVELILGHLRYLLTDVPPQPNSPPD----------NVFRPDRPAEADLGSKK 115

Query: 231 --GTEFPFTGLAFTTSGL 278
                 P  G++  TSG+
Sbjct: 116 RGSAPLPIHGISKITSGI 133



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 19 RAGNHNLTSFYAFVP 63
          R GN N TSFY FVP
Sbjct: 54 RTGNQNQTSFYPFVP 68


>gb|EJS83737.1| hypothetical protein AAUPMC_20941, partial [Pasteurella multocida
           subsp. multocida str. Anand1_cattle]
          Length = 126

 Score = 47.8 bits (112), Expect(2) = 8e-06
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = +3

Query: 54  FCSYEIFVLFDLISGPLSYLLTHVPPHPNSPPELSSARIG 173
           F  +EI VL +LI G L YLLT VPP PNSPP+    RIG
Sbjct: 66  FVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRRIG 105



 Score = 27.3 bits (59), Expect(2) = 8e-06
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 19 RAGNHNLTSFYAFVP 63
          R GN N TSFY FVP
Sbjct: 54 RTGNQNQTSFYPFVP 68


Top