BLASTX nr result

ID: Jatropha_contig00045673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00045673
         (389 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517048.1| hypothetical protein RCOM_0910720 [Ricinus c...    89   7e-16
ref|XP_002312561.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>ref|XP_002517048.1| hypothetical protein RCOM_0910720 [Ricinus communis]
           gi|223543683|gb|EEF45211.1| hypothetical protein
           RCOM_0910720 [Ricinus communis]
          Length = 208

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 11/125 (8%)
 Frame = -3

Query: 342 STSVPAISINLMKKA-IPIYTPNSISTKEQKPPSVLLFYAIPDRKIVNG--SVYNKQNLV 172
           S SV AIS +L+KKA IP + P +I+ K+   P +    AIP +KI+NG  ++ +K NL+
Sbjct: 4   SPSVSAISSSLIKKAMIPFHKPYAIAIKKTNLPCISS--AIPKKKILNGDNTLPHKPNLM 61

Query: 171 SLVAQLRLVNDQS--------NPPEFPRKPDYTSPSFPSEVPELPKDPEIEFDTSPPEEI 16
           S    L  V +Q+        NPPEFPR PD + PS P EVP+ PK PEIE  T+PPE I
Sbjct: 62  SFGPNLPQVPEQTIPSEIPENNPPEFPRNPDESPPSIPLEVPQFPKVPEIE--TAPPEVI 119

Query: 15  PLPPS 1
             PP+
Sbjct: 120 TEPPN 124


>ref|XP_002312561.1| predicted protein [Populus trichocarpa] gi|222852381|gb|EEE89928.1|
           hypothetical protein POPTR_0008s15940g [Populus
           trichocarpa]
          Length = 153

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 56/124 (45%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
 Frame = -3

Query: 342 STSVPAISINLMKKAIPIYTPNSISTKEQKPPSVLLFYAIPDRKIVNGSVYNKQNLVSLV 163
           S SV AIS NL+KKAIP  TPNS   +              +RKI+   VY K  L+SLV
Sbjct: 2   SASVSAISSNLVKKAIPFSTPNSAVVRTL------------NRKIIKSHVYGKPGLISLV 49

Query: 162 AQLRLVNDQSN-PPEFPRK----------PDYTSPSFPSEVPELPKDPEIEFDTSPPEEI 16
            +L LV++QSN PPE P K           +   PS P EVPELP  PEIE  TSP +E 
Sbjct: 50  CRL-LVHNQSNIPPEIPGKNPLEFLRRYSNNNDPPSVPPEVPELPSSPEIE--TSPSDEG 106

Query: 15  PLPP 4
            + P
Sbjct: 107 HIRP 110


Top