BLASTX nr result
ID: Jatropha_contig00045462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00045462
(931 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720162.1| ndhD [Jatropha curcas] gi|224979613|gb|ACN72... 116 1e-23
ref|YP_005296149.1| ndhD gene product (chloroplast) [Pentactina ... 112 2e-22
ref|YP_008081416.1| NADH dehydrogenase subunit 4 (chloroplast) [... 108 2e-21
ref|YP_008081507.1| NADH dehydrogenase subunit 4 (chloroplast) [... 108 2e-21
ref|YP_001718486.1| NADH dehydrogenase subunit 4 [Manihot escule... 108 3e-21
ref|YP_005090228.1| ndhD gene product (chloroplast) [Ricinus com... 108 3e-21
ref|YP_007025433.1| NADH-plastoquinone oxidoreductase subunit 4 ... 107 5e-21
gb|AFQ39597.1| NADH-plastoquinone oxidoreductase subunit 4 [Frag... 107 5e-21
gb|AFQ39592.1| NADH-plastoquinone oxidoreductase subunit 4 [Frag... 107 5e-21
ref|YP_004286152.1| NADH-plastoquinone oxidoreductase subunit 4 ... 107 5e-21
gb|ADD29819.1| NADH-plastoquinone oxidoreductase subunit 4 prote... 107 6e-21
ref|YP_004021714.1| NADH-plastoquinone oxidoreductase subunit 4 ... 107 8e-21
ref|YP_004841835.1| NADH-plastoquinone oxidoreductase subunit 4 ... 106 1e-20
ref|YP_004327711.1| NADH dehydrogenase subunit 4 [Hevea brasilie... 106 1e-20
sp|Q4VZL8.2|NU4C_CUCSA RecName: Full=NAD(P)H-quinone oxidoreduct... 106 1e-20
ref|YP_001109557.2| NADH dehydrogenase subunit 4 [Populus tricho... 106 1e-20
gb|ABI97463.1| NADH-plastoquinone oxidoreductase subunit 4 [Cucu... 106 1e-20
gb|ABO36761.1| NADH-plastoquinone oxidoreductase chain 4 [Populu... 106 1e-20
ref|YP_247650.1| NADH dehydrogenase subunit 4 [Cucumis sativus] ... 106 1e-20
emb|CDI73614.1| NADH-plastoquinone oxidoreductase subunit 4 [Pyr... 106 1e-20
>ref|YP_002720162.1| ndhD [Jatropha curcas] gi|224979613|gb|ACN72740.1| ndhD [Jatropha
curcas]
Length = 500
Score = 116 bits (291), Expect = 1e-23
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR
Sbjct: 444 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 500
>ref|YP_005296149.1| ndhD gene product (chloroplast) [Pentactina rupicola]
gi|371532670|gb|AEX31780.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Pentactina
rupicola]
Length = 500
Score = 112 bits (280), Expect = 2e-22
Identities = 52/57 (91%), Positives = 56/57 (98%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN QNSYFFDSGPRELFVSISILLPVIGIG+YPDFVFSLS+DKVEAI+SNYFYR
Sbjct: 444 YKLFNAQNSYFFDSGPRELFVSISILLPVIGIGVYPDFVFSLSVDKVEAIISNYFYR 500
>ref|YP_008081416.1| NADH dehydrogenase subunit 4 (chloroplast) [Tetracentron sinense]
gi|479279253|gb|AGJ72107.1| NADH dehydrogenase subunit 4
(chloroplast) [Tetracentron sinense]
Length = 500
Score = 108 bits (271), Expect = 2e-21
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELFVSISILLPVIGIGIYPDFV SLS+DKVEAILSNYFYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFVSISILLPVIGIGIYPDFVLSLSVDKVEAILSNYFYR 500
>ref|YP_008081507.1| NADH dehydrogenase subunit 4 (chloroplast) [Trochodendron
aralioides] gi|290486893|gb|ADD29831.1|
NADH-plastoquinone oxidoreductase subunit 4 protein
[Trochodendron aralioides] gi|479279346|gb|AGJ72199.1|
NADH dehydrogenase subunit 4 (chloroplast)
[Trochodendron aralioides]
Length = 500
Score = 108 bits (271), Expect = 2e-21
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFNV NSYFFDSGPRELFVSISI LPVIGIGIYPDFV SLS+DKVEAILSNYFYR
Sbjct: 444 YKLFNVPNSYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSVDKVEAILSNYFYR 500
>ref|YP_001718486.1| NADH dehydrogenase subunit 4 [Manihot esculenta]
gi|193806246|sp|B1NWJ9.1|NU4C_MANES RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|157695934|gb|ABV66203.1| NADH-plastoquinone
oxidoreductase subunit 4 [Manihot esculenta]
Length = 500
Score = 108 bits (270), Expect = 3e-21
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELFVSISILLPVIGIG YPDFVFSLS+D+VEAILSNYFYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFVSISILLPVIGIGFYPDFVFSLSVDRVEAILSNYFYR 500
>ref|YP_005090228.1| ndhD gene product (chloroplast) [Ricinus communis]
gi|339516216|gb|AEJ82606.1| NADH dehydrogenase subunit 4
[Ricinus communis]
Length = 506
Score = 108 bits (269), Expect = 3e-21
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELFVSISILLPVIGIGIYPDF+FSLS+D+VEA+LSNYFYR
Sbjct: 450 YKLFNAPNSYFFDSGPRELFVSISILLPVIGIGIYPDFLFSLSVDRVEALLSNYFYR 506
>ref|YP_007025433.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Fragaria
chiloensis] gi|428697336|ref|YP_007025518.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Fragaria virginiana]
gi|357198789|gb|AET62705.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Fragaria
chiloensis] gi|357198875|gb|AET62790.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Fragaria virginiana]
gi|407080546|gb|AFS89600.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Fragaria
chiloensis]
Length = 500
Score = 107 bits (268), Expect = 5e-21
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELF+SISILLPVIGIGIYPDFVFSLS+DK EAILSN+FYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFISISILLPVIGIGIYPDFVFSLSVDKAEAILSNFFYR 500
>gb|AFQ39597.1| NADH-plastoquinone oxidoreductase subunit 4 [Fragaria x bifera]
gi|402239396|gb|AFQ39604.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria iturupensis]
gi|402239403|gb|AFQ39610.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria x ananassa subsp.
cuneifolia] gi|402239410|gb|AFQ39616.1|
NADH-plastoquinone oxidoreductase subunit 4 [Fragaria
virginiana] gi|402239417|gb|AFQ39622.1|
NADH-plastoquinone oxidoreductase subunit 4 [Fragaria
bucharica] gi|402239424|gb|AFQ39628.1|
NADH-plastoquinone oxidoreductase subunit 4 [Fragaria
viridis] gi|402239431|gb|AFQ39634.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria nilgerrensis]
gi|402239438|gb|AFQ39640.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria nipponica]
gi|402239445|gb|AFQ39646.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria chinensis]
gi|402239452|gb|AFQ39652.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria tibetica]
gi|402239459|gb|AFQ39658.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria corymbosa]
gi|402239466|gb|AFQ39664.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria gracilis]
Length = 500
Score = 107 bits (268), Expect = 5e-21
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELF+SISILLPVIGIGIYPDFVFSLS+DK EAILSN+FYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFISISILLPVIGIGIYPDFVFSLSVDKAEAILSNFFYR 500
>gb|AFQ39592.1| NADH-plastoquinone oxidoreductase subunit 4 [Fragaria vesca subsp.
vesca]
Length = 500
Score = 107 bits (268), Expect = 5e-21
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELF+SISILLPVIGIGIYPDFVFSLS+DK EAILSN+FYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFISISILLPVIGIGIYPDFVFSLSVDKAEAILSNFFYR 500
>ref|YP_004286152.1| NADH-plastoquinone oxidoreductase subunit 4 [Fragaria vesca subsp.
vesca] gi|408830294|ref|YP_006883312.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|408830369|ref|YP_006883386.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria mandshurica]
gi|324022827|gb|ADY15401.1| NADH-plastoquinone
oxidoreductase subunit 4 [Fragaria vesca subsp. vesca]
gi|378554756|gb|AFC17691.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Fragaria vesca
subsp. bracteata] gi|378554831|gb|AFC17765.1|
NADH-plastoquinone oxidoreductase subunit 4 [Fragaria
mandshurica]
Length = 500
Score = 107 bits (268), Expect = 5e-21
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELF+SISILLPVIGIGIYPDFVFSLS+DK EAILSN+FYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFISISILLPVIGIGIYPDFVFSLSVDKAEAILSNFFYR 500
>gb|ADD29819.1| NADH-plastoquinone oxidoreductase subunit 4 protein [Berberidopsis
corallina]
Length = 500
Score = 107 bits (267), Expect = 6e-21
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELFVSISI LPVIGIGIYPDFV SLS+DKVEAILSNYFYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSVDKVEAILSNYFYR 500
>ref|YP_004021714.1| NADH-plastoquinone oxidoreductase subunit 4 [Prunus persica]
gi|309321483|gb|ADO65024.1| NADH-plastoquinone
oxidoreductase subunit 4 [Prunus persica]
Length = 500
Score = 107 bits (266), Expect = 8e-21
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELFVSISILLPVIGIG+YPDFV SLS+DKVEAI+SNYFYR
Sbjct: 444 YKLFNAPNSYFFDSGPRELFVSISILLPVIGIGVYPDFVSSLSVDKVEAIISNYFYR 500
>ref|YP_004841835.1| NADH-plastoquinone oxidoreductase subunit 4 [Cucumis melo subsp.
melo] gi|344030544|gb|AEM76945.1| NADH-plastoquinone
oxidoreductase subunit 4 [Cucumis melo subsp. melo]
Length = 506
Score = 106 bits (265), Expect = 1e-20
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN +NSYFFDSGPRELFV+ISIL+PVIGIGIYPDFVFSLS+DKVEAILSNYF R
Sbjct: 450 YKLFNAKNSYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 506
>ref|YP_004327711.1| NADH dehydrogenase subunit 4 [Hevea brasiliensis]
gi|308523554|gb|ADO33604.1| NADH dehydrogenase subunit 4
[Hevea brasiliensis]
Length = 500
Score = 106 bits (265), Expect = 1e-20
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NS FFDSGPRELFVSISILLPVIGIGIYPDFVFSLS+D+VEAILSNYFYR
Sbjct: 444 YKLFNAPNSSFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSVDRVEAILSNYFYR 500
>sp|Q4VZL8.2|NU4C_CUCSA RecName: Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4
Length = 500
Score = 106 bits (265), Expect = 1e-20
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN +NSYFFDSGPRELFV+ISIL+PVIGIGIYPDFVFSLS+DKVEAILSNYF R
Sbjct: 444 YKLFNAKNSYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 500
>ref|YP_001109557.2| NADH dehydrogenase subunit 4 [Populus trichocarpa]
gi|193806285|sp|A4GYW6.2|NU4C_POPTR RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4
Length = 500
Score = 106 bits (265), Expect = 1e-20
Identities = 50/56 (89%), Positives = 54/56 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFY 407
Y+LFN +NSYFFDSGPRELFVSI+ILLPVI IGIYPDFVFSLS+DKVEAILSNYFY
Sbjct: 444 YKLFNARNSYFFDSGPRELFVSIAILLPVISIGIYPDFVFSLSVDKVEAILSNYFY 499
>gb|ABI97463.1| NADH-plastoquinone oxidoreductase subunit 4 [Cucumis sativus]
gi|115498352|gb|ABI98794.1| NADH-plastoquinone
oxidoreductase subunit 4 [Cucumis sativus]
Length = 500
Score = 106 bits (265), Expect = 1e-20
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN +NSYFFDSGPRELFV+ISIL+PVIGIGIYPDFVFSLS+DKVEAILSNYF R
Sbjct: 444 YKLFNAKNSYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 500
>gb|ABO36761.1| NADH-plastoquinone oxidoreductase chain 4 [Populus trichocarpa]
Length = 506
Score = 106 bits (265), Expect = 1e-20
Identities = 50/56 (89%), Positives = 54/56 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFY 407
Y+LFN +NSYFFDSGPRELFVSI+ILLPVI IGIYPDFVFSLS+DKVEAILSNYFY
Sbjct: 450 YKLFNARNSYFFDSGPRELFVSIAILLPVISIGIYPDFVFSLSVDKVEAILSNYFY 505
>ref|YP_247650.1| NADH dehydrogenase subunit 4 [Cucumis sativus]
gi|67511449|emb|CAJ00809.1| NADH dehydrogenase subunit
IV [Cucumis sativus]
Length = 500
Score = 106 bits (265), Expect = 1e-20
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN +NSYFFDSGPRELFV+ISIL+PVIGIGIYPDFVFSLS+DKVEAILSNYF R
Sbjct: 444 YKLFNAKNSYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 500
>emb|CDI73614.1| NADH-plastoquinone oxidoreductase subunit 4 [Pyrus spinosa]
Length = 500
Score = 106 bits (264), Expect = 1e-20
Identities = 49/57 (85%), Positives = 54/57 (94%)
Frame = +3
Query: 240 YRLFNVQNSYFFDSGPRELFVSISILLPVIGIGIYPDFVFSLSIDKVEAILSNYFYR 410
Y+LFN NSYFFDSGPRELFVSISILLPVIGIG+YPDFV SLS+DKVEAI+SNYF+R
Sbjct: 444 YKLFNAPNSYFFDSGPRELFVSISILLPVIGIGVYPDFVLSLSVDKVEAIISNYFFR 500