BLASTX nr result
ID: Jatropha_contig00045381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00045381
(756 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE90671.2| hypothetical protein POPTR_0007s12690g [Populus t... 75 2e-24
gb|ERP61015.1| hypothetical protein POPTR_0005s12580g [Populus t... 77 6e-17
gb|ERP61014.1| hypothetical protein POPTR_0005s12580g [Populus t... 77 7e-17
gb|ABK96027.1| unknown [Populus trichocarpa] gi|550338797|gb|ERP... 77 7e-17
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei... 55 8e-14
gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus pe... 57 3e-11
gb|EOX91126.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobr... 49 1e-10
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 72 2e-10
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] 46 6e-08
gb|ESR38936.1| hypothetical protein CICLE_v10025502mg [Citrus cl... 55 8e-08
gb|ESR38935.1| hypothetical protein CICLE_v10025502mg [Citrus cl... 55 8e-08
>gb|EEE90671.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
Length = 497
Score = 74.7 bits (182), Expect(2) = 2e-24
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTEDDQRYDHYEHHRSRGKYDHMDVRGD 356
DRGW EQPE G PD E+D RYDHYEHHRSRG YD MDV+GD
Sbjct: 403 DRGWYEQPEQGQRLPDAENDPRYDHYEHHRSRGPYDPMDVQGD 445
Score = 64.3 bits (155), Expect(2) = 2e-24
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = -1
Query: 351 DRYEQYPDHDHDRYERMDQDDYHYDHGTSESLDXXXXXXXXXXXXXXEYDN 199
DRY+QYPD DHDRY++M+ DDYHYD GTSES + +YDN
Sbjct: 447 DRYDQYPDRDHDRYDQMEDDDYHYDRGTSESREKEREYRRSERSVSRDYDN 497
>gb|ERP61015.1| hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
Length = 481
Score = 76.6 bits (187), Expect(2) = 6e-17
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTEDDQRYDHYEHHRSRGKYDHMDVRGD 356
D GW EQPE G PD EDDQ YDHYEH RSRG+YDHMDV+GD
Sbjct: 395 DMGWYEQPEQGQKLPDAEDDQHYDHYEHRRSRGRYDHMDVQGD 437
Score = 37.4 bits (85), Expect(2) = 6e-17
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSES 259
H R + Y D D + M++DDYHYD GTSES
Sbjct: 438 HGRSDLYHGTDRDG-DHMEEDDYHYDRGTSES 468
>gb|ERP61014.1| hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
Length = 422
Score = 76.6 bits (187), Expect(2) = 7e-17
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTEDDQRYDHYEHHRSRGKYDHMDVRGD 356
D GW EQPE G PD EDDQ YDHYEH RSRG+YDHMDV+GD
Sbjct: 336 DMGWYEQPEQGQKLPDAEDDQHYDHYEHRRSRGRYDHMDVQGD 378
Score = 37.4 bits (85), Expect(2) = 7e-17
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSES 259
H R + Y D D + M++DDYHYD GTSES
Sbjct: 379 HGRSDLYHGTDRDG-DHMEEDDYHYDRGTSES 409
>gb|ABK96027.1| unknown [Populus trichocarpa] gi|550338797|gb|ERP61012.1|
hypothetical protein POPTR_0005s12580g [Populus
trichocarpa] gi|550338798|gb|ERP61013.1| hypothetical
protein POPTR_0005s12580g [Populus trichocarpa]
Length = 313
Score = 76.6 bits (187), Expect(2) = 7e-17
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTEDDQRYDHYEHHRSRGKYDHMDVRGD 356
D GW EQPE G PD EDDQ YDHYEH RSRG+YDHMDV+GD
Sbjct: 227 DMGWYEQPEQGQKLPDAEDDQHYDHYEHRRSRGRYDHMDVQGD 269
Score = 37.4 bits (85), Expect(2) = 7e-17
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSES 259
H R + Y D D + M++DDYHYD GTSES
Sbjct: 270 HGRSDLYHGTDRDG-DHMEEDDYHYDRGTSES 300
>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 54.7 bits (130), Expect(2) = 8e-14
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTE-DDQRYDHYEHHRSRGKYDHMDVRGD 356
D GW EQPE G P+ E DD+ Y HY+H ++RG+YDH+D +GD
Sbjct: 414 DHGWYEQPEHGHRRPEAEHDDEHYKHYDH-QARGQYDHLDAQGD 456
Score = 48.9 bits (115), Expect(2) = 8e-14
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSES 259
HD Y+++ D+D DRY +MD+D+YHYDH +S
Sbjct: 457 HDLYDRHADNDRDRYNQMDEDNYHYDHAAYDS 488
>gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus persica]
Length = 517
Score = 56.6 bits (135), Expect(2) = 3e-11
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSES 259
HDRY+QYPD HDRY+RM++DDYHY+ ES
Sbjct: 459 HDRYKQYPDRGHDRYDRMEEDDYHYEQAPVES 490
Score = 38.1 bits (87), Expect(2) = 3e-11
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -3
Query: 481 RGW*EQPEPGAWAPDTEDDQRYDHYEHHRSRGKYDHMDVRGD 356
+GW EQPE G D + D + YEHHRS +YD +DV+ D
Sbjct: 421 QGWFEQPEHGHRRSDPDQDA--EPYEHHRS--QYDQLDVQHD 458
>gb|EOX91126.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobroma cacao]
Length = 468
Score = 48.9 bits (115), Expect(2) = 1e-10
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTEDDQRYDHYEHHRSRGKYDHMDVRG 359
DRGW E+ E G D DDQ Y+HY+HHR RG+YD +D G
Sbjct: 404 DRGWYEEHEHGHRRSDL-DDQHYEHYQHHRGRGEYD-LDAHG 443
Score = 43.9 bits (102), Expect(2) = 1e-10
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDY 286
HDRY+QY DHD DRY+ +++DDY
Sbjct: 445 HDRYDQYADHDRDRYDAVEEDDY 467
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 72.0 bits (175), Expect = 2e-10
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Frame = -1
Query: 567 EPNLDRFETDLGRVARSERDFKLS*PKVIVVGKNNLNQGHGRQIQRMISVMITMNITEAE 388
E + DR E+ R R+ERD++ + P+ QGH RQ +
Sbjct: 385 ESDYDRVESKHERDRRAERDYEHAEPEDDSGWYEQPEQGHRRQDAEHDQRY------DHY 438
Query: 387 ENMITWMFEVT-----HDRYEQYPDHDHDRYERMDQDDYHYDHGTSESLDXXXXXXXXXX 223
E+ F+ HDRY+QYPDHD DRY+R+D+DDYHYD GTSES +
Sbjct: 439 EHRSRGQFDNMDGHGDHDRYDQYPDHDRDRYDRIDEDDYHYDGGTSESREREHEYRHSER 498
Query: 222 XXXXEYDN 199
EYDN
Sbjct: 499 SVSREYDN 506
>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 46.2 bits (108), Expect(2) = 6e-08
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -3
Query: 484 DRGW*EQPEPGAWAPDTEDDQ-RYDHYEHHRSRGKYDHMDVRGD 356
DRGW EQ + G P+ E D YD+Y+H++ +G+YD+ +GD
Sbjct: 436 DRGWYEQSDRGRKRPEGEHDHGHYDYYDHYQGQGQYDNQGAQGD 479
Score = 37.4 bits (85), Expect(2) = 6e-08
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -1
Query: 351 DRYEQYPDHDHDRYERMDQDDYHYDHGTSE 262
DRY+ D HDRY++MD+D+Y Y+ TSE
Sbjct: 481 DRYQD-SDRYHDRYDQMDEDNYGYERTTSE 509
>gb|ESR38936.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
Length = 480
Score = 55.5 bits (132), Expect(2) = 8e-08
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSESLD 253
HDRY QY D D+DRY++M++DDY YD TSES D
Sbjct: 436 HDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRD 469
Score = 27.7 bits (60), Expect(2) = 8e-08
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = -3
Query: 439 DTEDDQR-YDH---YEHHRSRGKYD 377
D EDD+ YDH YEHHR G +D
Sbjct: 413 DQEDDRGWYDHHENYEHHRGYGDHD 437
>gb|ESR38935.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
Length = 478
Score = 55.5 bits (132), Expect(2) = 8e-08
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -1
Query: 354 HDRYEQYPDHDHDRYERMDQDDYHYDHGTSESLD 253
HDRY QY D D+DRY++M++DDY YD TSES D
Sbjct: 434 HDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRD 467
Score = 27.7 bits (60), Expect(2) = 8e-08
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = -3
Query: 439 DTEDDQR-YDH---YEHHRSRGKYD 377
D EDD+ YDH YEHHR G +D
Sbjct: 411 DQEDDRGWYDHHENYEHHRGYGDHD 435