BLASTX nr result
ID: Jatropha_contig00045327
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00045327
(415 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306980.1| high mobility group family [Populus trichoca... 72 3e-14
ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus... 80 3e-13
gb|ADM47612.1| high mobility group protein [Hevea brasiliensis] 80 3e-13
gb|EOY15292.1| High mobility group B2, BETA 1,NFD2,NFD02 isoform... 76 4e-12
gb|EEE93976.2| hypothetical protein POPTR_0005s27390g [Populus t... 76 5e-12
gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirs... 74 2e-11
gb|ERP63932.1| hypothetical protein POPTR_0002s01000g [Populus t... 73 3e-11
ref|XP_002301918.1| high mobility group family [Populus trichoca... 73 3e-11
gb|ABK95882.1| unknown [Populus trichocarpa] 73 3e-11
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ... 72 5e-11
gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirs... 72 9e-11
ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine... 71 2e-10
ref|NP_001236841.1| HMG1/2-like protein [Glycine max] gi|123379|... 71 2e-10
gb|ESW08023.1| hypothetical protein PHAVU_009G012000g [Phaseolus... 70 4e-10
gb|ESW08021.1| hypothetical protein PHAVU_009G012000g [Phaseolus... 70 4e-10
gb|ESQ34726.1| hypothetical protein EUTSA_v10009970mg, partial [... 70 4e-10
ref|XP_006304292.1| hypothetical protein CARUB_v10010586mg [Caps... 70 4e-10
gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana] 70 4e-10
ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis ... 70 4e-10
ref|NP_564123.1| high mobility group B2 protein [Arabidopsis tha... 70 4e-10
>ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 72.4 bits (176), Expect(2) = 3e-14
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S+AEKAPFV+KA+KRK+EYEKK+KAYNK Q +GP
Sbjct: 81 DKWKSLSEAEKAPFVAKADKRKVEYEKKMKAYNKEQLKGP 120
Score = 31.2 bits (69), Expect(2) = 3e-14
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -2
Query: 315 RDRLKAPRKKRNLRSQC 265
+++LK PRKKR+LRSQC
Sbjct: 114 KEQLKGPRKKRSLRSQC 130
>ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B,
putative [Ricinus communis]
Length = 145
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
D+WKSMS++EKAPFV+KAEKRKIEYEKKLKAYNKGQAEGP
Sbjct: 75 DRWKSMSESEKAPFVAKAEKRKIEYEKKLKAYNKGQAEGP 114
>gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 79.7 bits (195), Expect = 3e-13
Identities = 35/40 (87%), Positives = 40/40 (100%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S+AEKAP+V+KAEKRK+EYEKKLKAYNKGQAEGP
Sbjct: 76 DKWKSLSEAEKAPYVAKAEKRKVEYEKKLKAYNKGQAEGP 115
>gb|EOY15292.1| High mobility group B2, BETA 1,NFD2,NFD02 isoform 1 [Theobroma
cacao] gi|508723396|gb|EOY15293.1| High mobility group
B2, BETA 1,NFD2,NFD02 isoform 1 [Theobroma cacao]
Length = 147
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKSMS+AEKAPFV+KAEKRK+EYEK +KAYNK QAEGP
Sbjct: 76 DKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGP 115
>gb|EEE93976.2| hypothetical protein POPTR_0005s27390g [Populus trichocarpa]
Length = 159
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S+AEKAPFV+KA+KRK+EYEKK+KAYNK QAEGP
Sbjct: 81 DKWKSLSEAEKAPFVAKADKRKVEYEKKMKAYNKEQAEGP 120
>gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S+AEKAP+V+KAEKRK+EYEK +KAYNK QAEGP
Sbjct: 72 DKWKSLSEAEKAPYVAKAEKRKVEYEKNMKAYNKRQAEGP 111
>gb|ERP63932.1| hypothetical protein POPTR_0002s01000g [Populus trichocarpa]
Length = 151
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S AEKAP+V+KA+KRK+EYEKK+KAYNK QAEGP
Sbjct: 80 DKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEGP 119
>ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| HMG 1 family protein
[Populus trichocarpa]
Length = 152
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S AEKAP+V+KA+KRK+EYEKK+KAYNK QAEGP
Sbjct: 80 DKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEGP 119
>gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S AEKAP+V+KA+KRK+EYEKK+KAYNK QAEGP
Sbjct: 80 DKWKSLSAAEKAPYVAKADKRKVEYEKKMKAYNKEQAEGP 119
>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high
mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product
[Vitis vinifera]
Length = 153
Score = 72.4 bits (176), Expect = 5e-11
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEG 299
DKWKSMS+AEKAP+V+KAEKRK+EYEK +KAYNK QAEG
Sbjct: 81 DKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQAEG 119
>gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 71.6 bits (174), Expect = 9e-11
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+S+AEK P+V KAEKRK+EYEK +KAYNK QAEGP
Sbjct: 76 DKWKSLSEAEKRPYVDKAEKRKVEYEKNMKAYNKRQAEGP 115
>ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/39 (76%), Positives = 37/39 (94%)
Frame = -1
Query: 412 KWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
KWK+MSDAEKAP+V+K+EKRK+EYEK ++AYNK QAEGP
Sbjct: 82 KWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGP 120
>ref|NP_001236841.1| HMG1/2-like protein [Glycine max] gi|123379|sp|P26585.1|HMGL_SOYBN
RecName: Full=HMG1/2-like protein; AltName: Full=Protein
SB11 gi|18645|emb|CAA41200.1| HMG-1 like protein gene
[Glycine max]
Length = 152
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/39 (76%), Positives = 37/39 (94%)
Frame = -1
Query: 412 KWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
KWK+MSDAEKAP+V+K+EKRK+EYEK ++AYNK QAEGP
Sbjct: 82 KWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGP 120
>gb|ESW08023.1| hypothetical protein PHAVU_009G012000g [Phaseolus vulgaris]
Length = 139
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -1
Query: 412 KWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
KWK+MSDA+KAPFV K+EKRK+EYEK ++AYNK QAEGP
Sbjct: 82 KWKTMSDADKAPFVVKSEKRKVEYEKSMRAYNKKQAEGP 120
>gb|ESW08021.1| hypothetical protein PHAVU_009G012000g [Phaseolus vulgaris]
gi|561009115|gb|ESW08022.1| hypothetical protein
PHAVU_009G012000g [Phaseolus vulgaris]
Length = 152
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -1
Query: 412 KWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
KWK+MSDA+KAPFV K+EKRK+EYEK ++AYNK QAEGP
Sbjct: 82 KWKTMSDADKAPFVVKSEKRKVEYEKSMRAYNKKQAEGP 120
>gb|ESQ34726.1| hypothetical protein EUTSA_v10009970mg, partial [Eutrema
salsugineum]
Length = 257
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+SDAEKAP+V+KAEKRK++YEK +KAYNK EGP
Sbjct: 190 DKWKSLSDAEKAPYVAKAEKRKVDYEKNMKAYNKKLEEGP 229
>ref|XP_006304292.1| hypothetical protein CARUB_v10010586mg [Capsella rubella]
gi|482573003|gb|EOA37190.1| hypothetical protein
CARUB_v10010586mg [Capsella rubella]
Length = 144
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+SD+EKAP+V+KAEKRK+EYEK +KAYNK EGP
Sbjct: 75 DKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGP 114
>gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+SD+EKAP+V+KAEKRK+EYEK +KAYNK EGP
Sbjct: 452 DKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGP 491
Score = 67.0 bits (162), Expect = 2e-09
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
+KWKS+SD+EKAP+V+KA+KRK+EYEK +KAYNK EGP
Sbjct: 593 EKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGP 632
>ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein
ARALYDRAFT_472301 [Arabidopsis lyrata subsp. lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein
ARALYDRAFT_472301 [Arabidopsis lyrata subsp. lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2
protein [Arabidopsis thaliana]
Length = 142
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+SD+EKAP+V+KAEKRK+EYEK +KAYNK EGP
Sbjct: 75 DKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGP 114
>ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High
mobility group B protein 2; AltName: Full=High mobility
group protein B 1; Short=AtHMGbeta1; Short=HMG beta 1;
AltName: Full=Nucleosome/chromatin assembly factor group
D 02; Short=Nucleosome/chromatin assembly factor group D
2 gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein
[Arabidopsis thaliana] gi|2832359|emb|CAA74401.1| HMG
protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis
thaliana] gi|21536964|gb|AAM61305.1| unknown
[Arabidopsis thaliana] gi|26452113|dbj|BAC43146.1|
unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein
[Arabidopsis thaliana] gi|332191885|gb|AEE30006.1| high
mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = -1
Query: 415 DKWKSMSDAEKAPFVSKAEKRKIEYEKKLKAYNKGQAEGP 296
DKWKS+SD+EKAP+V+KAEKRK+EYEK +KAYNK EGP
Sbjct: 75 DKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGP 114