BLASTX nr result

ID: Jatropha_contig00044921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00044921
         (886 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522460.1| nucleic acid binding protein, putative [Rici...    60   3e-07
ref|XP_002316129.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06
gb|ERP56387.1| hypothetical protein POPTR_0010s17430g [Populus t...    58   1e-06

>ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538345|gb|EEF39952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 559

 Score = 60.5 bits (145), Expect(2) = 3e-07
 Identities = 39/87 (44%), Positives = 49/87 (56%)
 Frame = -1

Query: 655 VPVSVDFLYDLKHRSPESQSRGCRYS*SGGYSPRD*QASDNNKSNTRILTGCERAQ*AYA 476
           +PVS+D L   K+ + +SQSRG  YS + GYS RD   S++  +N   L G E    AY 
Sbjct: 475 IPVSMDMLDSPKYGNRDSQSRGRGYSSASGYSSRDLPPSESYGNNASSLNGGESGYGAYG 534

Query: 475 GQFSHGR*SAMGLGVQNSVPQGEHQGY 395
           G FS GR    GL  QNS  Q +H GY
Sbjct: 535 G-FSSGRSGGSGLSGQNSA-QRKHHGY 559



 Score = 21.2 bits (43), Expect(2) = 3e-07
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 719 KTN*FGRHEALISFPSNVFPHSP 651
           K N FGR  AL +FP    P+ P
Sbjct: 455 KANLFGRDGALTAFPP-ALPYIP 476


>ref|XP_002316129.1| predicted protein [Populus trichocarpa] gi|222865169|gb|EEF02300.1|
           hypothetical protein POPTR_0010s17430g [Populus
           trichocarpa]
          Length = 553

 Score = 58.2 bits (139), Expect(2) = 1e-06
 Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = -1

Query: 655 VPVSVDFLYDLKHRSPESQSRGCRY-S*SGGYSPRD*QASDNNKSNTRILTGCERAQ*AY 479
           +P+S+D     K+ S +SQSRG  Y S S GY  RD   SD+  SN   L G E +  AY
Sbjct: 467 IPMSLDTSDGSKYGSRDSQSRGRGYTSSSSGYGSRDVHPSDSYGSNGGSLIGGESSYGAY 526

Query: 478 AGQFSHGR*SAMGLGVQNSVPQGEHQGY 395
            G FS GR    GL  QN V Q +H GY
Sbjct: 527 GG-FSSGRSGGAGLSGQNPVSQRKHHGY 553



 Score = 21.2 bits (43), Expect(2) = 1e-06
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 719 KTN*FGRHEALISFPSNVFPHSP 651
           K N FGR  AL +FP    P+ P
Sbjct: 447 KANLFGRDGALTAFPP-ALPYIP 468


>gb|ERP56387.1| hypothetical protein POPTR_0010s17430g [Populus trichocarpa]
          Length = 543

 Score = 58.2 bits (139), Expect(2) = 1e-06
 Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = -1

Query: 655 VPVSVDFLYDLKHRSPESQSRGCRY-S*SGGYSPRD*QASDNNKSNTRILTGCERAQ*AY 479
           +P+S+D     K+ S +SQSRG  Y S S GY  RD   SD+  SN   L G E +  AY
Sbjct: 457 IPMSLDTSDGSKYGSRDSQSRGRGYTSSSSGYGSRDVHPSDSYGSNGGSLIGGESSYGAY 516

Query: 478 AGQFSHGR*SAMGLGVQNSVPQGEHQGY 395
            G FS GR    GL  QN V Q +H GY
Sbjct: 517 GG-FSSGRSGGAGLSGQNPVSQRKHHGY 543



 Score = 21.2 bits (43), Expect(2) = 1e-06
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 719 KTN*FGRHEALISFPSNVFPHSP 651
           K N FGR  AL +FP    P+ P
Sbjct: 437 KANLFGRDGALTAFPP-ALPYIP 458


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