BLASTX nr result

ID: Jatropha_contig00044857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00044857
         (390 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESR54152.1| hypothetical protein CICLE_v10018514mg [Citrus cl...    75   8e-12
gb|EEF05584.2| hypothetical protein POPTR_0015s03100g [Populus t...    74   1e-11
ref|XP_002321457.1| predicted protein [Populus trichocarpa]            74   1e-11
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...    62   6e-08
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...    62   6e-08

>gb|ESR54152.1| hypothetical protein CICLE_v10018514mg [Citrus clementina]
          Length = 1354

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 42/70 (60%), Positives = 50/70 (71%)
 Frame = -2

Query: 308  LLGDEANASSMGGLVKIQEPSSIKLATVQVKPSESSGSKMANPNVETKPEPSEGNSAPRF 129
            LLGDEA A S+    K +E S+IK AT Q+KP E SGSK+    V  KPEPSEG+ AP+F
Sbjct: 1286 LLGDEAKAPSVELAAK-KEESNIKNATAQLKPFEPSGSKVTISKVAAKPEPSEGSPAPKF 1344

Query: 128  RIKIKNRTLN 99
            RIKIK+RT N
Sbjct: 1345 RIKIKSRTQN 1354


>gb|EEF05584.2| hypothetical protein POPTR_0015s03100g [Populus trichocarpa]
          Length = 657

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -2

Query: 308 LLGDEANASSMGGLVKIQEPSSIKLATVQVKPSESSGSKMANPNVETKPEPSEGNSAPRF 129
           LL   A A+S+    K ++P+ IKLATV +KP++ S SK    N+ETKPEPSEG S P+F
Sbjct: 588 LLSGGAKATSVELPGKNEKPT-IKLATVPLKPNQPSESKAVATNIETKPEPSEGTSVPKF 646

Query: 128 RIKIKNRTLN 99
           RIKIKNRTLN
Sbjct: 647 RIKIKNRTLN 656


>ref|XP_002321457.1| predicted protein [Populus trichocarpa]
          Length = 1359

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -2

Query: 308  LLGDEANASSMGGLVKIQEPSSIKLATVQVKPSESSGSKMANPNVETKPEPSEGNSAPRF 129
            LL   A A+S+    K ++P+ IKLATV +KP++ S SK    N+ETKPEPSEG S P+F
Sbjct: 1290 LLSGGAKATSVELPGKNEKPT-IKLATVPLKPNQPSESKAVATNIETKPEPSEGTSVPKF 1348

Query: 128  RIKIKNRTLN 99
            RIKIKNRTLN
Sbjct: 1349 RIKIKNRTLN 1358


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 1 [Vitis vinifera]
          Length = 1325

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -2

Query: 308  LLGDEANASSMG-GLVKIQEPSSIKLATVQVKPSESSGSKMANPNVETKPEPSEGNSAPR 132
            LL  +A ASS+  G+ K++  S IKLATVQ K SESS SK+    V TK E SEG+SAP+
Sbjct: 1262 LLSGDAKASSVELGVKKVE--SGIKLATVQYKASESSVSKI----VTTKVEASEGSSAPK 1315

Query: 131  FRIKIKNRT 105
            FRIKIKNR+
Sbjct: 1316 FRIKIKNRS 1324


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Vitis vinifera]
          Length = 1345

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -2

Query: 308  LLGDEANASSMG-GLVKIQEPSSIKLATVQVKPSESSGSKMANPNVETKPEPSEGNSAPR 132
            LL  +A ASS+  G+ K++  S IKLATVQ K SESS SK+    V TK E SEG+SAP+
Sbjct: 1282 LLSGDAKASSVELGVKKVE--SGIKLATVQYKASESSVSKI----VTTKVEASEGSSAPK 1335

Query: 131  FRIKIKNRT 105
            FRIKIKNR+
Sbjct: 1336 FRIKIKNRS 1344


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