BLASTX nr result

ID: Jatropha_contig00044228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00044228
         (804 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ...    77   2e-12
gb|EEE94466.2| hypothetical protein POPTR_0005s20820g [Populus t...    71   4e-10
ref|XP_002307469.1| predicted protein [Populus trichocarpa]            71   4e-10
gb|ESR47577.1| hypothetical protein CICLE_v10000341mg [Citrus cl...    66   1e-09
ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago ...    65   3e-08
ref|XP_004505526.1| PREDICTED: putative DEAD-box ATP-dependent R...    65   3e-08
gb|ERN08808.1| hypothetical protein AMTR_s00017p00257250 [Ambore...    60   8e-07
ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent R...    60   8e-07
ref|XP_004290571.1| PREDICTED: putative DEAD-box ATP-dependent R...    60   1e-06
ref|XP_004248109.1| PREDICTED: putative DEAD-box ATP-dependent R...    60   1e-06
ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent R...    59   1e-06
emb|CBI19932.3| unnamed protein product [Vitis vinifera]               59   1e-06
gb|EOY16523.1| Dead box ATP-dependent RNA helicase isoform 3 [Th...    59   2e-06
gb|EOY16522.1| Dead box ATP-dependent RNA helicase isoform 2 [Th...    59   2e-06
gb|EOY16521.1| Dead box ATP-dependent RNA helicase isoform 1 [Th...    59   2e-06
ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent R...    59   2e-06
gb|EMJ19742.1| hypothetical protein PRUPE_ppa012780mg [Prunus pe...    58   3e-06
ref|XP_006361031.1| PREDICTED: putative DEAD-box ATP-dependent R...    58   4e-06
ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent R...    57   9e-06

>ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 789

 Score = 76.6 bits (187), Expect(2) = 2e-12
 Identities = 36/55 (65%), Positives = 42/55 (76%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGK 341
           + RG+NRKF  G+K   +PN NVRSEIK L QVRKERQKKA  +SHMK+K  GGK
Sbjct: 721 RLRGNNRKFKGGKKQNFMPNANVRSEIKSLEQVRKERQKKASQMSHMKSKGAGGK 775



 Score = 22.3 bits (46), Expect(2) = 2e-12
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 575 KSFLKAIGNGENDEQTSGLSGDRQI 501
           K  LK   +  N EQTS  SGD ++
Sbjct: 698 KVSLKGASDEGNAEQTSTFSGDNRL 722


>gb|EEE94466.2| hypothetical protein POPTR_0005s20820g [Populus trichocarpa]
          Length = 786

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKNFLK 329
           + RG+NR F   +K   +PN NVRSEIKDL QVRKERQKKA  +S+MK+K   GK F K
Sbjct: 719 QLRGNNRNFRGSKKQHSLPNANVRSEIKDLEQVRKERQKKADRVSYMKSKGSKGKKFGK 777


>ref|XP_002307469.1| predicted protein [Populus trichocarpa]
          Length = 174

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKNFLK 329
           + RG+NR F   +K   +PN NVRSEIKDL QVRKERQKKA  +S+MK+K   GK F K
Sbjct: 107 QLRGNNRNFRGSKKQHSLPNANVRSEIKDLEQVRKERQKKADRVSYMKSKGSKGKKFGK 165


>gb|ESR47577.1| hypothetical protein CICLE_v10000341mg [Citrus clementina]
          Length = 786

 Score = 65.9 bits (159), Expect(3) = 1e-09
 Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = -3

Query: 496 GHNRKFNAGR-KHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKNFLK 329
           G+NRKF  G+ + R VPN +VRSEIKDL QVRKERQKKA  I+ MK K   GK F K
Sbjct: 721 GNNRKFRGGKNQQRSVPNAHVRSEIKDLDQVRKERQKKADRIAFMKGKTQKGKKFSK 777



 Score = 22.3 bits (46), Expect(3) = 1e-09
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 578 EKSFLKAIGNGENDEQTSGLSGDRQI 501
           +K +LK   N  N E+T+ + G R +
Sbjct: 694 KKVYLKGASNEGNAEETTSVPGGRHL 719



 Score = 20.8 bits (42), Expect(3) = 1e-09
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 591 DRSHRKVFSKG 559
           +RSH+KV+ KG
Sbjct: 690 ERSHKKVYLKG 700


>ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
           gi|355508591|gb|AES89733.1| hypothetical protein
           MTR_4g079320 [Medicago truncatula]
          Length = 787

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = -3

Query: 502 FRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGK 341
           ++G  R +  G+K  L+PN +VRSEIKD+ Q+RKERQKKA  IS+MK+K+  GK
Sbjct: 718 YQGGGRNYKGGKKQHLMPNAHVRSEIKDMDQIRKERQKKASKISYMKSKSPKGK 771


>ref|XP_004505526.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Cicer arietinum]
          Length = 770

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 31/54 (57%), Positives = 40/54 (74%)
 Frame = -3

Query: 502 FRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGK 341
           +RG  R F  G+K   +PN +VRSEIKD+ Q+RKERQKKA  IS+MK+K+  GK
Sbjct: 705 YRGGARNFRGGKKQHSMPNAHVRSEIKDMDQIRKERQKKASKISYMKSKSPKGK 758


>gb|ERN08808.1| hypothetical protein AMTR_s00017p00257250 [Amborella trichopoda]
          Length = 237

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKNFLK 329
           + RG+ R F   +  R +PN NV SE+KD+ QVRK RQ+KA  ISH  + + GGK  +K
Sbjct: 132 QMRGNKRAFKGNKMKRSIPNANVPSELKDIEQVRKRRQQKAARISHYNDDSAGGKQNMK 190


>ref|XP_004142579.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Cucumis sativus]
          Length = 789

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKN 359
           +F G+ R+F  GR    VPN +VR E+K+L Q+RKERQKKA  + HMKN
Sbjct: 722 RFSGNKRRFGQGRNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKN 770


>ref|XP_004290571.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Fragaria vesca subsp. vesca]
          Length = 791

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -3

Query: 505 KFRGHNR-KFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKA-GGGKNF 335
           +++G+NR     GRK + VPN +VRSEIKDL QVRKERQKKA   S++K+K+  GGK F
Sbjct: 721 RWQGNNRGNPRGGRKKQSVPNAHVRSEIKDLDQVRKERQKKADRTSYLKSKSTKGGKKF 779


>ref|XP_004248109.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Solanum lycopersicum]
          Length = 785

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
 Frame = -3

Query: 499 RGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAG-----GGK 341
           +G  R F  GR +R VPN +VRSEIKD+ QVRKER+KKA   S++K K G     GGK
Sbjct: 715 QGGGRNFRGGRNNRSVPNAHVRSEIKDVDQVRKEREKKAQRASYLKTKKGKKSYKGGK 772


>ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Vitis vinifera]
          Length = 784

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNK-AGGGKNFLK 329
           +  G N K    + HR +PN +VRSEIKD  QVRK+RQKKA  ISHMK+K   G K F K
Sbjct: 717 QLHGGNWKLRGRKNHRSMPNAHVRSEIKDSEQVRKDRQKKANRISHMKSKPMKGNKKFGK 776


>emb|CBI19932.3| unnamed protein product [Vitis vinifera]
          Length = 786

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNK-AGGGKNFLK 329
           +  G N K    + HR +PN +VRSEIKD  QVRK+RQKKA  ISHMK+K   G K F K
Sbjct: 719 QLHGGNWKLRGRKNHRSMPNAHVRSEIKDSEQVRKDRQKKANRISHMKSKPMKGNKKFGK 778


>gb|EOY16523.1| Dead box ATP-dependent RNA helicase isoform 3 [Theobroma cacao]
          Length = 791

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHR-LVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKN 338
           + RG+ RKF   +K +  VPN +VRSEIKDL QVRKERQKKA  IS MK K  G KN
Sbjct: 722 RLRGNARKFRGNKKSQHSVPNAHVRSEIKDLEQVRKERQKKASKISLMKGK--GNKN 776


>gb|EOY16522.1| Dead box ATP-dependent RNA helicase isoform 2 [Theobroma cacao]
          Length = 792

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHR-LVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKN 338
           + RG+ RKF   +K +  VPN +VRSEIKDL QVRKERQKKA  IS MK K  G KN
Sbjct: 723 RLRGNARKFRGNKKSQHSVPNAHVRSEIKDLEQVRKERQKKASKISLMKGK--GNKN 777


>gb|EOY16521.1| Dead box ATP-dependent RNA helicase isoform 1 [Theobroma cacao]
          Length = 790

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHR-LVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKN 338
           + RG+ RKF   +K +  VPN +VRSEIKDL QVRKERQKKA  IS MK K  G KN
Sbjct: 721 RLRGNARKFRGNKKSQHSVPNAHVRSEIKDLEQVRKERQKKASKISLMKGK--GNKN 775


>ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Cucumis sativus]
          Length = 789

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = -3

Query: 505 KFRGHNRKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKN 359
           +F G+ R+F  G+    VPN +VR E+K+L Q+RKERQKKA  + HMKN
Sbjct: 722 RFSGNKRRFGQGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKN 770


>gb|EMJ19742.1| hypothetical protein PRUPE_ppa012780mg [Prunus persica]
          Length = 154

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = -3

Query: 505 KFRGHNRKFNAG-RKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKNFLK 329
           +++G+  K + G RK   VPN +VRSEIKDL QVRK+RQKKA  IS+MK+K+  G  F K
Sbjct: 77  RWQGNKGKKSWGSRKQYSVPNAHVRSEIKDLEQVRKDRQKKADRISYMKSKSSKGNKFGK 136


>ref|XP_006361031.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Solanum tuberosum]
          Length = 787

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
 Frame = -3

Query: 487 RKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAG-----GGK 341
           R F  GR +R VPN +VRSEIKD+ QVRKER+KKA   S++K K G     GGK
Sbjct: 719 RNFRGGRNNRSVPNAHVRSEIKDVDQVRKEREKKAQRASYLKTKKGKKAYKGGK 772


>ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
           [Glycine max]
          Length = 778

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = -3

Query: 487 RKFNAGRKHRLVPNVNVRSEIKDLPQVRKERQKKAI*ISHMKNKAGGGKNFLK 329
           R F   +K   +PN +VRSEIKD+ Q+RKERQ KA  +S++K+K+  GK F K
Sbjct: 718 RNFKGSKKQHSMPNAHVRSEIKDMDQIRKERQTKANRVSYIKSKSTKGKKFGK 770


Top