BLASTX nr result

ID: Jatropha_contig00044067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00044067
         (515 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF00849.2| hypothetical protein POPTR_0010s09410g [Populus t...    60   4e-07
ref|XP_002517094.1| pentatricopeptide repeat-containing protein,...    59   5e-07
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...    57   2e-06

>gb|EEF00849.2| hypothetical protein POPTR_0010s09410g [Populus trichocarpa]
          Length = 553

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = -2

Query: 514 LKGMVPKYDTYKMLVQELEQRNMIEAKEKIEKLMFQAEEPQL 389
           LKGMVP   T+K LV+ELEQ+NM E KEKIEKLMFQA E  L
Sbjct: 511 LKGMVPMVKTFKALVEELEQKNMKEMKEKIEKLMFQARERNL 552


>ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543729|gb|EEF45257.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -2

Query: 514 LKGMVPKYDTYKMLVQELEQRNMIEAKEKIEKLMFQAEE 398
           +KG++P+  TYKMLV+ELEQ N+ EAKEKI+KLMFQ E+
Sbjct: 507 MKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLMFQTED 545


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 547

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -2

Query: 145 AGNLGPYQSRVELKVGGLVGVHNMLREYSSGNATVKIDFTDLSCPHSW 2
           A N  P+Q   E K G L  VH + R Y S N   KIDFTDL+CPHSW
Sbjct: 24  AENGEPFQLHAEFKFGALFSVHTLTRLYRSDNGKPKIDFTDLTCPHSW 71