BLASTX nr result
ID: Jatropha_contig00043980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00043980
(862 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEK78298.1| hypothetical chloroplast RF2 [Tamarix pentandra] 64 6e-13
ref|YP_001109545.1| Ycf2 [Populus trichocarpa] gi|134093274|ref|... 61 1e-12
ref|YP_665601.1| Ycf2 [Populus alba] gi|110227139|ref|YP_665617.... 61 1e-12
gb|AEK71416.1| hypothetical chloroplast RF2 [Schinus terebinthif... 61 1e-12
ref|XP_002337985.1| predicted protein [Populus trichocarpa] 61 1e-12
gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia] 63 1e-12
ref|YP_567121.1| Ycf2 [Vitis vinifera] gi|91984056|ref|YP_567140... 63 1e-12
gb|AEK71487.1| hypothetical chloroplast RF2 [Ixerba brexioides] 63 1e-12
gb|AEK71891.1| hypothetical chloroplast RF2 [Tetrastigma yunnane... 63 2e-12
gb|AEK71518.1| hypothetical chloroplast RF2 [Melianthus comosus] 63 2e-12
gb|AEK71423.1| hypothetical chloroplast RF2 [Albizia julibrissin] 62 2e-12
ref|YP_740161.1| hypothetical protein RF2 [Daucus carota] gi|114... 62 2e-12
gb|AFB74312.1| Ycf2 protein (chloroplast) [Portulaca oleracea] 62 4e-12
gb|ABQ14883.1| Ycf2 [Paeonia brownii] 61 4e-12
gb|ADD30897.1| putative RF2 protein [Oxalis latifolia] gi|340807... 61 4e-12
gb|AEK78264.1| hypothetical chloroplast RF2 [Portulaca oleracea] 62 4e-12
gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum] 61 5e-12
gb|ABQ14849.1| Ycf2 [Itea virginica] 61 5e-12
gb|ABQ14908.1| Ycf2 [Pterostemon rotundifolius] 61 5e-12
ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasilie... 61 5e-12
>gb|AEK78298.1| hypothetical chloroplast RF2 [Tamarix pentandra]
Length = 2291
Score = 64.3 bits (155), Expect(2) = 6e-13
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH KF I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKFWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 6e-13
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>ref|YP_001109545.1| Ycf2 [Populus trichocarpa] gi|134093274|ref|YP_001109575.1| Ycf2
[Populus trichocarpa]
gi|205413355|sp|A4GYV4.1|YCF2_POPTR RecName:
Full=Protein ycf2 gi|133712106|gb|ABO36749.1| Ycf2
[Populus trichocarpa] gi|133712136|gb|ABO36779.1| Ycf2
[Populus trichocarpa]
Length = 2285
Score = 61.2 bits (147), Expect(2) = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
LFSRNSQGSTSN YF+IKG+
Sbjct: 61 LFSRNSQGSTSNRYFTIKGV 80
>ref|YP_665601.1| Ycf2 [Populus alba] gi|110227139|ref|YP_665617.1| Ycf2 [Populus
alba] gi|122247651|sp|Q14F97.1|YCF2_POPAL RecName:
Full=Protein ycf2 gi|109945560|dbj|BAE97248.1| ycf2
[Populus alba] gi|109945577|dbj|BAE97265.1| ycf2
[Populus alba]
Length = 2282
Score = 61.2 bits (147), Expect(2) = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
LFSRNSQGSTSN YF+IKG+
Sbjct: 61 LFSRNSQGSTSNRYFTIKGV 80
>gb|AEK71416.1| hypothetical chloroplast RF2 [Schinus terebinthifolius]
Length = 2262
Score = 61.2 bits (147), Expect(2) = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
LFSRNSQGSTSN YF+IKG+
Sbjct: 61 LFSRNSQGSTSNRYFTIKGV 80
>ref|XP_002337985.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 61.2 bits (147), Expect(2) = 1e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
LFSRNSQGSTSN YF+IKG+
Sbjct: 61 LFSRNSQGSTSNRYFTIKGV 80
>gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia]
Length = 2307
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q TSVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFTSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 1e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>ref|YP_567121.1| Ycf2 [Vitis vinifera] gi|91984056|ref|YP_567140.1| Ycf2 [Vitis
vinifera] gi|122246606|sp|Q0ZIV6.1|YCF2_VITVI RecName:
Full=Protein ycf2 gi|91701693|gb|ABE47577.1|
hypothetical chloroplast RF2 [Vitis vinifera]
gi|91701714|gb|ABE47598.1| hypothetical chloroplast RF2
[Vitis vinifera] gi|550533693|dbj|BAO01537.1| Ycf2
(chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533710|dbj|BAO01554.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533779|dbj|BAO01621.1|
Ycf2 (chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533796|dbj|BAO01638.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533864|dbj|BAO01705.1|
Ycf2 (chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533881|dbj|BAO01722.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica]
Length = 2300
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q TSVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFTSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 1e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|AEK71487.1| hypothetical chloroplast RF2 [Ixerba brexioides]
Length = 2278
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K+ I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKYWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 1e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|AEK71891.1| hypothetical chloroplast RF2 [Tetrastigma yunnanense]
Length = 2302
Score = 63.2 bits (152), Expect(2) = 2e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q TSVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIENSHYFLDSWTQFTSVGSFIHIFFHQERF 49
Score = 35.8 bits (81), Expect(2) = 2e-12
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF IKG+
Sbjct: 61 LLSRNSQGSTSNRYFPIKGV 80
>gb|AEK71518.1| hypothetical chloroplast RF2 [Melianthus comosus]
Length = 2272
Score = 63.2 bits (152), Expect(2) = 2e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH LK I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQLKSWIFELREILREIKNSQYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 35.8 bits (81), Expect(2) = 2e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNLYFTIKGV 80
>gb|AEK71423.1| hypothetical chloroplast RF2 [Albizia julibrissin]
Length = 2249
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
+GH LKF I E RE++ EI N Y L+ W+Q VGS IHIFFHQ+RF
Sbjct: 2 RGHQLKFWIFELREILREIKNSHYFLDSWTQFNLVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 2e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>ref|YP_740161.1| hypothetical protein RF2 [Daucus carota]
gi|114107195|ref|YP_740178.1| hypothetical protein RF2
[Daucus carota] gi|122246291|sp|Q0G9Q1.1|YCF2_DAUCA
RecName: Full=Protein ycf2 gi|113200951|gb|ABI32467.1|
hypothetical protein RF2 [Daucus carota]
gi|113200970|gb|ABI32486.1| hypothetical protein RF2
[Daucus carota]
Length = 2091
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH KF I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+ F
Sbjct: 2 KGHQFKFWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQEHF 49
Score = 36.6 bits (83), Expect(2) = 2e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|AFB74312.1| Ycf2 protein (chloroplast) [Portulaca oleracea]
Length = 2285
Score = 61.6 bits (148), Expect(2) = 4e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSQYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 4e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|ABQ14883.1| Ycf2 [Paeonia brownii]
Length = 2285
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 37.0 bits (84), Expect(2) = 4e-12
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -3
Query: 68 KYLFSRNSQGSTSNGYFSIKGI 3
+ LFSRNSQ STSN YF+IKG+
Sbjct: 59 RILFSRNSQSSTSNRYFTIKGV 80
>gb|ADD30897.1| putative RF2 protein [Oxalis latifolia] gi|340807132|gb|AEK71730.1|
hypothetical chloroplast RF2 [Oxalis latifolia]
Length = 2280
Score = 61.2 bits (147), Expect(2) = 4e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 37.0 bits (84), Expect(2) = 4e-12
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKGI
Sbjct: 61 LLSRNSQGSTSNRYFTIKGI 80
>gb|AEK78264.1| hypothetical chloroplast RF2 [Portulaca oleracea]
Length = 2270
Score = 61.6 bits (148), Expect(2) = 4e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSQYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 4e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]
Length = 2316
Score = 61.2 bits (147), Expect(2) = 5e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 5e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|ABQ14849.1| Ycf2 [Itea virginica]
Length = 2306
Score = 61.2 bits (147), Expect(2) = 5e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 5e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>gb|ABQ14908.1| Ycf2 [Pterostemon rotundifolius]
Length = 2305
Score = 61.2 bits (147), Expect(2) = 5e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 5e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80
>ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasiliensis]
gi|326909454|ref|YP_004327705.1| hypothetical
chloroplast RF2 [Hevea brasiliensis]
gi|308523548|gb|ADO33598.1| hypothetical chloroplast RF2
[Hevea brasiliensis] gi|308523568|gb|ADO33618.1|
hypothetical chloroplast RF2 [Hevea brasiliensis]
Length = 2303
Score = 61.2 bits (147), Expect(2) = 5e-12
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2
Query: 237 KGHHLKFGISEQREMMSEINN*SYLLEPWSQVTSVGSLIHIFFHQDRF 94
KGH K I E RE++ EI N Y L+ W+Q SVGS IHIFFHQ+RF
Sbjct: 2 KGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIFFHQERF 49
Score = 36.6 bits (83), Expect(2) = 5e-12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 62 LFSRNSQGSTSNGYFSIKGI 3
L SRNSQGSTSN YF+IKG+
Sbjct: 61 LLSRNSQGSTSNRYFTIKGV 80