BLASTX nr result

ID: Jatropha_contig00043970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043970
         (97 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE94907.2| hypothetical protein POPTR_0013s01580g [Populus t...    62   6e-08
ref|XP_002318984.1| predicted protein [Populus trichocarpa]            62   6e-08
ref|XP_002884771.1| hypothetical protein ARALYDRAFT_897178 [Arab...    55   7e-06

>gb|EEE94907.2| hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
          Length = 162

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   LMDKGVHRMDRHPVDGIGGIRKPPPKSGHGGK 96
           LMDKGV RM+RHPVDG GGI +PPPKSGHGGK
Sbjct: 52  LMDKGVMRMERHPVDGKGGIGRPPPKSGHGGK 83


>ref|XP_002318984.1| predicted protein [Populus trichocarpa]
          Length = 156

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   LMDKGVHRMDRHPVDGIGGIRKPPPKSGHGGK 96
           LMDKGV RM+RHPVDG GGI +PPPKSGHGGK
Sbjct: 46  LMDKGVMRMERHPVDGKGGIGRPPPKSGHGGK 77


>ref|XP_002884771.1| hypothetical protein ARALYDRAFT_897178 [Arabidopsis lyrata subsp.
           lyrata] gi|297330611|gb|EFH61030.1| hypothetical protein
           ARALYDRAFT_897178 [Arabidopsis lyrata subsp. lyrata]
          Length = 149

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   LMDKGVHRMDRHPVDGIGGIRKPPPKSGHGGK 96
           LM+KGV RMDRHP DGI  +R+PPPKSGHGGK
Sbjct: 48  LMEKGVQRMDRHPSDGI-PLRRPPPKSGHGGK 78


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