BLASTX nr result

ID: Jatropha_contig00043838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043838
         (266 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr...    78   1e-12
gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...    77   3e-12
gb|EOY31715.1| Small nuclear ribonucleoprotein family protein [T...    76   4e-12
ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E...    75   7e-12
gb|EOY25715.1| Small nuclear ribonucleoprotein family protein [T...    75   9e-12
ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [S...    75   1e-11
ref|XP_006353941.1| PREDICTED: small nuclear ribonucleoprotein E...    74   1e-11
ref|XP_004169084.1| PREDICTED: small nuclear ribonucleoprotein E...    74   1e-11
ref|XP_004146294.1| PREDICTED: small nuclear ribonucleoprotein E...    74   1e-11
ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E...    74   1e-11
gb|ACU15277.1| unknown [Glycine max]                                   74   1e-11
ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative ...    74   1e-11
gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays] gi|1...    74   1e-11
gb|EAZ05598.1| hypothetical protein OsI_27814 [Oryza sativa Indi...    74   1e-11
ref|NP_001060998.1| Os08g0151400 [Oryza sativa Japonica Group] g...    74   1e-11
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...    74   2e-11
ref|XP_002331664.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
gb|EMJ13516.1| hypothetical protein PRUPE_ppa014076mg [Prunus pe...    73   3e-11
ref|XP_004235398.1| PREDICTED: small nuclear ribonucleoprotein E...    73   3e-11
tpg|DAA52858.1| TPA: hypothetical protein ZEAMMB73_852117, parti...    73   3e-11

>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
          Length = 88

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK
Sbjct: 50  MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 88


>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVN+KKKTRKSLGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNIKKKTRKSLGRILLKGDNITLMMNTGK 88


>gb|EOY31715.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
          Length = 88

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVN+KKK+RKSLGRILLKGDNITLMMNSGK
Sbjct: 50  MNLVLDDAEEVNIKKKSRKSLGRILLKGDNITLMMNSGK 88


>ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis sativus]
           gi|449444032|ref|XP_004139779.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cucumis sativus]
           gi|449502888|ref|XP_004161771.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cucumis sativus]
          Length = 88

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKK+RK+LGRILLKGDNITLMMNSGK
Sbjct: 50  MNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNSGK 88


>gb|EOY25715.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
          Length = 114

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVN+KKK+RKSLGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNIKKKSRKSLGRILLKGDNITLMMNAGK 88


>ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
           gi|241926921|gb|EES00066.1| hypothetical protein
           SORBIDRAFT_03g001950 [Sorghum bicolor]
          Length = 88

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEE+NVKK TRKSLGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEINVKKNTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_006353941.1| PREDICTED: small nuclear ribonucleoprotein E-like [Solanum
           tuberosum]
          Length = 88

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKKT K LGRILLKGDNITLMMNSGK
Sbjct: 50  MNLVLDDAEEVNVKKKTSKQLGRILLKGDNITLMMNSGK 88


>ref|XP_004169084.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform 1
           [Cucumis sativus] gi|449524148|ref|XP_004169085.1|
           PREDICTED: small nuclear ribonucleoprotein E-like
           isoform 2 [Cucumis sativus]
          Length = 39

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKK++K+LGRILLKGDNITLMMNSGK
Sbjct: 1   MNLVLDDAEEVNVKKKSKKALGRILLKGDNITLMMNSGK 39


>ref|XP_004146294.1| PREDICTED: small nuclear ribonucleoprotein E-like isoform 1
           [Cucumis sativus]
          Length = 88

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKK++K+LGRILLKGDNITLMMNSGK
Sbjct: 50  MNLVLDDAEEVNVKKKSKKALGRILLKGDNITLMMNSGK 88


>ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|356516401|ref|XP_003526883.1| PREDICTED: small
           nuclear ribonucleoprotein E [Glycine max]
           gi|502098396|ref|XP_004491225.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cicer arietinum]
           gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
          Length = 88

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKK+RK+LGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNTGK 88


>gb|ACU15277.1| unknown [Glycine max]
          Length = 88

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKK+RK+LGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative [Ricinus communis]
           gi|223538046|gb|EEF39659.1| Small nuclear
           ribonucleoprotein E, putative [Ricinus communis]
          Length = 88

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKK+RK+LGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNTGK 88


>gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays]
           gi|195611048|gb|ACG27354.1| small nuclear
           ribonucleoprotein E [Zea mays]
           gi|413947730|gb|AFW80379.1| small nuclear
           ribonucleoprotein E [Zea mays]
          Length = 88

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVL+DAEE+NVKK TRKSLGRILLKGDNITLMMNSGK
Sbjct: 50  MNLVLEDAEEINVKKNTRKSLGRILLKGDNITLMMNSGK 88


>gb|EAZ05598.1| hypothetical protein OsI_27814 [Oryza sativa Indica Group]
           gi|125560167|gb|EAZ05615.1| hypothetical protein
           OsI_27832 [Oryza sativa Indica Group]
           gi|222639919|gb|EEE68051.1| hypothetical protein
           OsJ_26051 [Oryza sativa Japonica Group]
          Length = 79

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEE+NVKK TRKSLGRILLKGDNITLMMN+GK
Sbjct: 41  MNLVLDDAEEINVKKDTRKSLGRILLKGDNITLMMNTGK 79


>ref|NP_001060998.1| Os08g0151400 [Oryza sativa Japonica Group]
           gi|113622967|dbj|BAF22912.1| Os08g0151400, partial
           [Oryza sativa Japonica Group]
          Length = 64

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEE+NVKK TRKSLGRILLKGDNITLMMN+GK
Sbjct: 26  MNLVLDDAEEINVKKDTRKSLGRILLKGDNITLMMNTGK 64


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVN+KKK+RK+LGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNIKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_002331664.1| predicted protein [Populus trichocarpa]
           gi|224143797|ref|XP_002325079.1| predicted protein
           [Populus trichocarpa] gi|118483404|gb|ABK93602.1|
           unknown [Populus trichocarpa]
           gi|550336606|gb|ERP59645.1| small nuclear
           ribonucleoprotein E [Populus trichocarpa]
          Length = 88

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVL+DAEEVN+KKK+RKSLGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLEDAEEVNIKKKSRKSLGRILLKGDNITLMMNTGK 88


>gb|EMJ13516.1| hypothetical protein PRUPE_ppa014076mg [Prunus persica]
          Length = 88

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/39 (89%), Positives = 39/39 (100%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLD+AEEV++KKKTRKSLGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDEAEEVSIKKKTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_004235398.1| PREDICTED: small nuclear ribonucleoprotein E-like [Solanum
           lycopersicum]
          Length = 88

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVLDDAEEVNVKKKT K LGRILLKGDNITLMMN+GK
Sbjct: 50  MNLVLDDAEEVNVKKKTSKQLGRILLKGDNITLMMNTGK 88


>tpg|DAA52858.1| TPA: hypothetical protein ZEAMMB73_852117, partial [Zea mays]
          Length = 177

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -3

Query: 264 MNLVLDDAEEVNVKKKTRKSLGRILLKGDNITLMMNSGK 148
           MNLVL+DAEE+NVKK TRK+LGRILLKGDNITLMMNSGK
Sbjct: 139 MNLVLEDAEEINVKKNTRKTLGRILLKGDNITLMMNSGK 177


Top