BLASTX nr result
ID: Jatropha_contig00043671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00043671
(771 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN7... 402 e-123
ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot escul... 369 e-113
gb|ABV65755.1| RNA polymerase beta'' subunit, partial (chloropla... 369 e-113
ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasili... 367 e-112
ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus co... 358 e-108
gb|ABD93816.1| RNA polymerase beta chain [Euphorbia milii var. s... 356 e-107
gb|ABV65748.1| RNA polymerase beta'' subunit, partial (chloropla... 352 e-107
gb|ABV65752.1| RNA polymerase beta'' subunit, partial (chloropla... 347 e-105
gb|ABV65761.1| RNA polymerase beta'' subunit, partial (chloropla... 342 e-103
gb|ADD31153.1| RNA polymerase beta'' subunit protein [Ilex cornuta] 337 e-102
gb|ABV65764.1| RNA polymerase beta'' subunit, partial (chloropla... 336 e-102
gb|ADO13878.1| RNA polymerase beta subunit [Ilex crenata] 337 e-102
gb|ABV65731.1| RNA polymerase beta'' subunit, partial (chloropla... 337 e-102
gb|ABV65732.1| RNA polymerase beta'' subunit, partial (chloropla... 339 e-102
gb|ABV65776.1| RNA polymerase beta'' subunit, partial (chloropla... 333 e-101
gb|ABD93759.1| RNA polymerase beta chain [Ilex sp. Qiu 94038] 337 e-101
ref|YP_001109489.1| RNA polymerase beta'' subunit [Populus trich... 334 e-101
ref|YP_665548.1| RNA polymerase beta'' subunit [Populus alba] gi... 334 e-101
gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis] 335 e-100
gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liqu... 330 e-100
>ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN72682.1| rpoC2 [Jatropha
curcas]
Length = 1394
Score = 402 bits (1032), Expect(2) = e-123
Identities = 207/224 (92%), Positives = 211/224 (94%), Gaps = 3/224 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK
Sbjct: 719 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 778
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ
Sbjct: 779 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 838
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG
Sbjct: 839 LVRTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 898
Query: 648 SGPISNNESDRTNINPFYPFIPR-QIQQSL--NKSDYSTCRRRS 770
SGPISNNESDRTNINPFYP + +IQQSL N+ ST R+
Sbjct: 899 SGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTISTLLNRN 942
Score = 65.9 bits (159), Expect(2) = e-123
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK
Sbjct: 690 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 722
>ref|YP_001718427.1| RNA polymerase beta'' subunit [Manihot esculenta]
gi|212288328|sp|B1NWE0.1|RPOC2_MANES RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|157695875|gb|ABV66144.1| RNA polymerase beta subunit
[Manihot esculenta]
Length = 1393
Score = 369 bits (947), Expect(2) = e-113
Identities = 187/213 (87%), Positives = 196/213 (92%), Gaps = 1/213 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFPGETDKISRHS ILIPPGTVKTNSKESKKVKNWIYIQRIT KK
Sbjct: 714 KKKKMELKIFSGDIHFPGETDKISRHSDILIPPGTVKTNSKESKKVKNWIYIQRITPTKK 773
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIA+GINLETLFPQDLLQEK+NLKLRVVNYILYG GK IRGISDTSIQ
Sbjct: 774 KYFVLVRPVIIYEIANGINLETLFPQDLLQEKDNLKLRVVNYILYGTGKPIRGISDTSIQ 833
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARA+FVE+STNGLI DFLRINL K HISYI RKRNDPSG
Sbjct: 834 LVRTCLVLNWDQDKKSSSIEEARAAFVEISTNGLIRDFLRINLVKFHISYIGRKRNDPSG 893
Query: 648 SGPISNNESDRTNINPFYPFIPR-QIQQSLNKS 743
S PISNN SDRTNINPFYP + ++QQSL ++
Sbjct: 894 SEPISNNGSDRTNINPFYPIYSKTRVQQSLKQN 926
Score = 65.9 bits (159), Expect(2) = e-113
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK
Sbjct: 685 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 717
>gb|ABV65755.1| RNA polymerase beta'' subunit, partial (chloroplast) [Manihot
esculenta]
Length = 1281
Score = 369 bits (947), Expect(2) = e-113
Identities = 187/213 (87%), Positives = 196/213 (92%), Gaps = 1/213 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFPGETDKISRHS ILIPPGTVKTNSKESKKVKNWIYIQRIT KK
Sbjct: 684 KKKKMELKIFSGDIHFPGETDKISRHSDILIPPGTVKTNSKESKKVKNWIYIQRITPTKK 743
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIA+GINLETLFPQDLLQEK+NLKLRVVNYILYG GK IRGISDTSIQ
Sbjct: 744 KYFVLVRPVIIYEIANGINLETLFPQDLLQEKDNLKLRVVNYILYGTGKPIRGISDTSIQ 803
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARA+FVE+STNGLI DFLRINL K HISYI RKRNDPSG
Sbjct: 804 LVRTCLVLNWDQDKKSSSIEEARAAFVEISTNGLIRDFLRINLVKFHISYIGRKRNDPSG 863
Query: 648 SGPISNNESDRTNINPFYPFIPR-QIQQSLNKS 743
S PISNN SDRTNINPFYP + ++QQSL ++
Sbjct: 864 SEPISNNGSDRTNINPFYPIYSKTRVQQSLKQN 896
Score = 65.9 bits (159), Expect(2) = e-113
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK
Sbjct: 655 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 687
>ref|YP_004327651.1| RNA polymerase beta'' subunit [Hevea brasiliensis]
gi|308523496|gb|ADO33546.1| RNA polymerase beta'' subunit
[Hevea brasiliensis]
Length = 1395
Score = 367 bits (943), Expect(2) = e-112
Identities = 191/224 (85%), Positives = 200/224 (89%), Gaps = 3/224 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
K+KKMELKIFSGDIHFPGETDKISRHSGIL+PPGTVKTNSKESKKVKNWIYIQRIT KK
Sbjct: 714 KEKKMELKIFSGDIHFPGETDKISRHSGILMPPGTVKTNSKESKKVKNWIYIQRITPTKK 773
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIA+GINLETLFPQDLLQEK+NLKLRVVNYILYG GK IRGISDTSIQ
Sbjct: 774 KYFVLVRPVIIYEIANGINLETLFPQDLLQEKDNLKLRVVNYILYGTGKPIRGISDTSIQ 833
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARA FVE+STNGLI DFLRINL KSHISYI RKRNDPSG
Sbjct: 834 LVRTCLVLNWDQDKKSSSIEEARAFFVEISTNGLIRDFLRINLVKSHISYIGRKRNDPSG 893
Query: 648 SGPISNNESDRTNINPFYPFIPR-QIQQSL--NKSDYSTCRRRS 770
S ISNN SDRTNINPFYP + +IQQSL N+ ST R+
Sbjct: 894 SELISNNGSDRTNINPFYPIYSKTRIQQSLKQNQGTISTLLNRN 937
Score = 64.3 bits (155), Expect(2) = e-112
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQIALNTRSRVGGLVRVERK+KK
Sbjct: 685 VRNNSIIGVDTQIALNTRSRVGGLVRVERKEKK 717
>ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus communis]
gi|339516155|gb|AEJ82545.1| RNA polymerase beta subunit
[Ricinus communis]
Length = 1405
Score = 358 bits (919), Expect(2) = e-108
Identities = 186/224 (83%), Positives = 199/224 (88%), Gaps = 3/224 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKK+ELKIFSGDIHFPGETDKISRHSGILIPPG VKTNSKESKK KNWIYIQRI +K
Sbjct: 718 KKKKIELKIFSGDIHFPGETDKISRHSGILIPPGMVKTNSKESKKQKNWIYIQRIAPTRK 777
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVR VIIYEIA+GINLETLFP+DLLQEK+NLKLRVVNYIL GNGK IRGISDTSIQ
Sbjct: 778 KYFVLVRLVIIYEIANGINLETLFPRDLLQEKDNLKLRVVNYILSGNGKPIRGISDTSIQ 837
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQ+KKSSSIEEARASFVEV+TNGLI DFLRINL KSHISYISRKRNDPSG
Sbjct: 838 LVRTCLVLNWDQEKKSSSIEEARASFVEVNTNGLIRDFLRINLVKSHISYISRKRNDPSG 897
Query: 648 SGPISNNESDRTNINPFYP-FIPRQIQQSL--NKSDYSTCRRRS 770
SGPISNN ++ TNINPFYP + +IQQSL N+ ST R+
Sbjct: 898 SGPISNNGANHTNINPFYPIYFKTRIQQSLKQNQGTISTLLNRN 941
Score = 62.0 bits (149), Expect(2) = e-108
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDT I LNTRSRVGGLVRVERKKKK
Sbjct: 689 VRNNSIIGVDTPITLNTRSRVGGLVRVERKKKK 721
>gb|ABD93816.1| RNA polymerase beta chain [Euphorbia milii var. splendens]
Length = 814
Score = 356 bits (913), Expect(2) = e-107
Identities = 186/216 (86%), Positives = 194/216 (89%), Gaps = 4/216 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKK+ELKIFSGDIHFPGETDKISRHSGILIPPGTVKT+SKESKKVKNWIYIQRIT KK
Sbjct: 240 KKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTVKTHSKESKKVKNWIYIQRITPTKK 299
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIA+GINLETLFP DLLQEK+NLKLRVVNYILYGN K IRGISDTSIQ
Sbjct: 300 KYFVLVRPVIIYEIANGINLETLFPADLLQEKDNLKLRVVNYILYGNSKPIRGISDTSIQ 359
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYIS---RKRND 638
LV TCLVLNWDQDKKSSSIEEARASFVEVSTNGLI DFLRINL KS I YIS R RND
Sbjct: 360 LVRTCLVLNWDQDKKSSSIEEARASFVEVSTNGLIRDFLRINLLKSKIFYISSRTRNRND 419
Query: 639 PSGSGPISNNESDRTNINPFYP-FIPRQIQQSLNKS 743
PSG GPISNN SD TNINPFYP + +IQQSL ++
Sbjct: 420 PSGLGPISNNGSDPTNINPFYPSYSKARIQQSLKQN 455
Score = 60.8 bits (146), Expect(2) = e-107
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNS++GVDTQI+LNTRSR GGLVRVERKKKK
Sbjct: 211 VRNNSLVGVDTQISLNTRSRGGGLVRVERKKKK 243
>gb|ABV65748.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ixonanthes
icosandra x Ixonanthes cuneata]
Length = 1262
Score = 352 bits (902), Expect(2) = e-107
Identities = 182/220 (82%), Positives = 194/220 (88%), Gaps = 1/220 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHF GETDKISR+SGILIPPGTVKTNSKESKKVKNWIY+ RIT KK
Sbjct: 681 KKKKMELKIFSGDIHFLGETDKISRYSGILIPPGTVKTNSKESKKVKNWIYVHRITPTKK 740
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIADGINLET FP DLLQEK+NLKLRVVNYILYGNGK I+GISD SIQ
Sbjct: 741 KYFVLVRPVIIYEIADGINLETFFPPDLLQEKDNLKLRVVNYILYGNGKPIQGISDASIQ 800
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARASFVEVSTNGLI DFL+INL KSHISYISRK NDPSG
Sbjct: 801 LVRTCLVLNWDQDKKSSSIEEARASFVEVSTNGLIRDFLKINLVKSHISYISRKGNDPSG 860
Query: 648 SGPISNNESDRTNINPFYPFIPR-QIQQSLNKSDYSTCRR 764
S IS++ SDRTNINPFY + +IQQSL ++ + R
Sbjct: 861 SELISDHGSDRTNINPFYSIYSKTRIQQSLKQNQGTLLNR 900
Score = 64.3 bits (155), Expect(2) = e-107
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNTRSRVGGLVRVERKKKK
Sbjct: 652 VRNNSIIGVDTQITLNTRSRVGGLVRVERKKKK 684
>gb|ABV65752.1| RNA polymerase beta'' subunit, partial (chloroplast) [Leonia
glycycarpa]
Length = 1274
Score = 347 bits (891), Expect(2) = e-105
Identities = 180/212 (84%), Positives = 188/212 (88%), Gaps = 1/212 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFPG+TDKISR+SGILI PG VKTNSKESKKVKNWIY+QRIT KK
Sbjct: 681 KKKKMELKIFSGDIHFPGKTDKISRYSGILISPGPVKTNSKESKKVKNWIYVQRITPTKK 740
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPVIIYEIADGINLETLF DLLQEK NLKLRVVNYILYGNGK IRGISDTSIQ
Sbjct: 741 KYFVLVRPVIIYEIADGINLETLFYSDLLQEKNNLKLRVVNYILYGNGKPIRGISDTSIQ 800
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARASFV++STNGLI DFLRINL KSH YISRKRN PS
Sbjct: 801 LVRTCLVLNWDQDKKSSSIEEARASFVKISTNGLIRDFLRINLVKSHFFYISRKRNGPSS 860
Query: 648 SGPISNNESDRTNINPFY-PFIPRQIQQSLNK 740
SG IS+N DRTNINPFY + +IQQSL K
Sbjct: 861 SGSISDNGLDRTNINPFYFLYSKARIQQSLKK 892
Score = 61.6 bits (148), Expect(2) = e-105
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
V+NNSIIGVDTQI LNTRSRVGGLVR+ERKKKK
Sbjct: 652 VQNNSIIGVDTQITLNTRSRVGGLVRLERKKKK 684
>gb|ABV65761.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ochna
mossambicensis]
Length = 1268
Score = 342 bits (876), Expect(2) = e-103
Identities = 182/223 (81%), Positives = 191/223 (85%), Gaps = 2/223 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFPGETDKISRHSGILIPPG VKTNSKESKKVKNWIY+QRIT KK
Sbjct: 680 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGRVKTNSKESKKVKNWIYVQRITPTKK 739
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
K+FVLVRPVIIYEIADGINLETLFPQ LL+EKENLKLRVVNYI YGNGK IRGISDT+IQ
Sbjct: 740 KHFVLVRPVIIYEIADGINLETLFPQGLLKEKENLKLRVVNYIFYGNGKPIRGISDTNIQ 799
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEA ASFVEVSTNGLI DFLRI K HISYISRKRNDPSG
Sbjct: 800 LVRTCLVLNWDQDKKSSSIEEAHASFVEVSTNGLIRDFLRI---KCHISYISRKRNDPSG 856
Query: 648 SGPISNNESDRTNINPFYPFIPRQIQQSL--NKSDYSTCRRRS 770
SG +S+N D T INPFY +IQQ L N+ ST R+
Sbjct: 857 SGVLSDNGPDHTIINPFYS--KGRIQQLLKQNQGTISTLLNRN 897
Score = 62.4 bits (150), Expect(2) = e-103
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGV+TQI LNTRSRVGGLVRVERKKKK
Sbjct: 651 VRNNSIIGVNTQITLNTRSRVGGLVRVERKKKK 683
>gb|ADD31153.1| RNA polymerase beta'' subunit protein [Ilex cornuta]
Length = 1384
Score = 337 bits (864), Expect(2) = e-102
Identities = 170/215 (79%), Positives = 191/215 (88%), Gaps = 3/215 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKK++ELKIFSGDIHFPGETDKISRHSG+LIPPGT KTNSKESKK+KNWIY+QRIT KK
Sbjct: 714 KKKRIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKK 773
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPV+ YEI DGINL TLFP DLLQE++N++LRV+NYILYGNGK IRGISDTSIQ
Sbjct: 774 KYFVLVRPVVTYEITDGINLATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQ 833
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARASFVE+ T GLI DFLRI+L KS ISY +RKRNDPSG
Sbjct: 834 LVRTCLVLNWDQDKKSSSIEEARASFVEIKTKGLIRDFLRIDLVKSSISY-TRKRNDPSG 892
Query: 648 SGPISNNESDRTNINPF---YPFIPRQIQQSLNKS 743
+G IS+N SDRTNINPF Y + +IQ+SLN++
Sbjct: 893 AGLISDNGSDRTNINPFSFIYTYSKARIQESLNQN 927
Score = 63.2 bits (152), Expect(2) = e-102
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNTRSRVGGLVRVERKKK+
Sbjct: 685 VRNNSIIGVDTQITLNTRSRVGGLVRVERKKKR 717
>gb|ABV65764.1| RNA polymerase beta'' subunit, partial (chloroplast) [Phyllanthus
calycinus]
Length = 1271
Score = 336 bits (862), Expect(2) = e-102
Identities = 176/224 (78%), Positives = 194/224 (86%), Gaps = 3/224 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKK+EL+IFSGDIHFPGETDKISRHSGILIPP TVKTNSKESKKVKNWIY+QRIT KK
Sbjct: 679 KKKKIELQIFSGDIHFPGETDKISRHSGILIPPETVKTNSKESKKVKNWIYVQRITPTKK 738
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
K+FVLVRPVI++EI DGINLE LFPQDLLQEK++LKLR+VNYILYGNGK IRGISDTSIQ
Sbjct: 739 KFFVLVRPVILFEIVDGINLEKLFPQDLLQEKDDLKLRIVNYILYGNGKPIRGISDTSIQ 798
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVL WDQD+KS EEA SFVEVSTNGLI +FLRINLAKS ISYISRKRNDPSG
Sbjct: 799 LVRTCLVLTWDQDQKS---EEAHVSFVEVSTNGLIHEFLRINLAKSPISYISRKRNDPSG 855
Query: 648 SGPISNNESDRTNINPFYPFIPR-QIQQSL--NKSDYSTCRRRS 770
SG IS+N SDRTN+NPFY + +I+QSL N+ ST R+
Sbjct: 856 SGLISDNGSDRTNMNPFYSIYSKSRIKQSLKQNQGTISTLLNRN 899
Score = 63.9 bits (154), Expect(2) = e-102
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNTRSRVGGL+RVERKKKK
Sbjct: 650 VRNNSIIGVDTQITLNTRSRVGGLIRVERKKKK 682
>gb|ADO13878.1| RNA polymerase beta subunit [Ilex crenata]
Length = 1182
Score = 337 bits (864), Expect(2) = e-102
Identities = 170/215 (79%), Positives = 191/215 (88%), Gaps = 3/215 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKK++ELKIFSGDIHFPGETDKISRHSG+LIPPGT KTNSKESKK+KNWIY+QRIT KK
Sbjct: 700 KKKRIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKK 759
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPV+ YEI DGINL TLFP DLLQE++N++LRV+NYILYGNGK IRGISDTSIQ
Sbjct: 760 KYFVLVRPVVTYEITDGINLATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQ 819
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARASFVE+ T GLI DFLRI+L KS ISY +RKRNDPSG
Sbjct: 820 LVRTCLVLNWDQDKKSSSIEEARASFVEIKTKGLIRDFLRIDLVKSSISY-TRKRNDPSG 878
Query: 648 SGPISNNESDRTNINPF---YPFIPRQIQQSLNKS 743
+G IS+N SDRTNINPF Y + +IQ+SLN++
Sbjct: 879 AGLISDNGSDRTNINPFSFIYTYSKARIQESLNQN 913
Score = 63.2 bits (152), Expect(2) = e-102
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNTRSRVGGLVRVERKKK+
Sbjct: 671 VRNNSIIGVDTQITLNTRSRVGGLVRVERKKKR 703
>gb|ABV65731.1| RNA polymerase beta'' subunit, partial (chloroplast) [Elaeocarpus
angustifolius]
Length = 1263
Score = 337 bits (864), Expect(2) = e-102
Identities = 175/212 (82%), Positives = 186/212 (87%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKK+ELKIFSGDI+FPGETDKISRH ILIPPGTVK NSKESKK+KNWIY+QRIT KK
Sbjct: 679 KKKKIELKIFSGDIYFPGETDKISRHGDILIPPGTVKKNSKESKKLKNWIYVQRITPTKK 738
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRP IIYEIADGINL TLFPQDLLQE++NL+LR+VNYILYGNGK IRGISDTSIQ
Sbjct: 739 KYFVLVRPAIIYEIADGINLATLFPQDLLQERDNLQLRIVNYILYGNGKPIRGISDTSIQ 798
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEA SFVEVSTN LI DFLRI+L KSHI YI RKRNDPSG
Sbjct: 799 LVRTCLVLNWDQDKKSSSIEEAPTSFVEVSTNSLIRDFLRIDLVKSHILYI-RKRNDPSG 857
Query: 648 SGPISNNESDRTNINPFYPFIPRQIQQSLNKS 743
SG I +N SDRTNINPFY IQQSL K+
Sbjct: 858 SGLIFDNGSDRTNINPFYS--KAGIQQSLRKN 887
Score = 62.8 bits (151), Expect(2) = e-102
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNTRSRVGGLVR ERKKKK
Sbjct: 650 VRNNSIIGVDTQITLNTRSRVGGLVRAERKKKK 682
>gb|ABV65732.1| RNA polymerase beta'' subunit, partial (chloroplast) [Elatine
triandra]
Length = 692
Score = 339 bits (869), Expect(2) = e-102
Identities = 179/214 (83%), Positives = 187/214 (87%), Gaps = 5/214 (2%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKK+ELKIFSGDIHFPGETDKISR SGILIPPGTVKTNSK+SKK KNWIY+QRIT KK
Sbjct: 90 KKKKIELKIFSGDIHFPGETDKISRDSGILIPPGTVKTNSKKSKKGKNWIYVQRITPTKK 149
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGI----SD 455
KY VLVRPVIIYEIADGINL TLFPQDLLQEK+NLKLRVVNYILY NGK IRGI
Sbjct: 150 KYCVLVRPVIIYEIADGINLATLFPQDLLQEKDNLKLRVVNYILYENGKPIRGIXXXXXX 209
Query: 456 TSIQLVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRN 635
SIQLV TCLVLNWDQDKK SSIEEARASFVEV TNGLI DFLRINL KSHISYISRKRN
Sbjct: 210 XSIQLVRTCLVLNWDQDKKGSSIEEARASFVEVRTNGLIRDFLRINLVKSHISYISRKRN 269
Query: 636 DPSGSGPISNNESDRTNINPFYPFIPR-QIQQSL 734
DPSGSG IS+NES+ TNINPFY + +IQQSL
Sbjct: 270 DPSGSGLISDNESNPTNINPFYSLYSKARIQQSL 303
Score = 59.7 bits (143), Expect(2) = e-102
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI L RSRVGGLVRVERKKKK
Sbjct: 61 VRNNSIIGVDTQITLKIRSRVGGLVRVERKKKK 93
>gb|ABV65776.1| RNA polymerase beta'' subunit, partial (chloroplast) [Stachyurus
praecox]
Length = 1280
Score = 333 bits (854), Expect(2) = e-101
Identities = 172/213 (80%), Positives = 189/213 (88%), Gaps = 1/213 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKK+ELKIFSGDIHFPGETDKISRHSGILIPPGT +TNSKESKK+KNWIY+QRIT KK
Sbjct: 683 KKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTGQTNSKESKKLKNWIYVQRITPTKK 742
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPV+ YEIA GINL TLFPQDLL+E + ++LRVVNYILYGNGK IRGISDTSIQ
Sbjct: 743 KYFVLVRPVVTYEIAGGINLATLFPQDLLREGDTMQLRVVNYILYGNGKPIRGISDTSIQ 802
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEA A FVEVSTNGLI FLRI+L K HISYI RKRNDPS
Sbjct: 803 LVRTCLVLNWDQDKKSSSIEEAHAFFVEVSTNGLIRYFLRIDLVKFHISYI-RKRNDPSS 861
Query: 648 SGPISNNESDRTNINPFY-PFIPRQIQQSLNKS 743
SG IS+N+SDRTNINPFY + +IQQSL+++
Sbjct: 862 SGLISDNKSDRTNINPFYSSYSKARIQQSLDQN 894
Score = 64.3 bits (155), Expect(2) = e-101
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDT+IALNTRSRVGGLVRVERKKKK
Sbjct: 654 VRNNSIIGVDTRIALNTRSRVGGLVRVERKKKK 686
>gb|ABD93759.1| RNA polymerase beta chain [Ilex sp. Qiu 94038]
Length = 866
Score = 337 bits (864), Expect(2) = e-101
Identities = 170/215 (79%), Positives = 191/215 (88%), Gaps = 3/215 (1%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKK++ELKIFSGDIHFPGETDKISRHSG+LIPPGT KTNSKESKK+KNWIY+QRIT KK
Sbjct: 265 KKKRIELKIFSGDIHFPGETDKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKK 324
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
KYFVLVRPV+ YEI DGINL TLFP DLLQE++N++LRV+NYILYGNGK IRGISDTSIQ
Sbjct: 325 KYFVLVRPVVTYEITDGINLATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQ 384
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKSSSIEEARASFVE+ T GLI DFLRI+L KS ISY +RKRNDPSG
Sbjct: 385 LVRTCLVLNWDQDKKSSSIEEARASFVEIKTKGLIRDFLRIDLVKSSISY-TRKRNDPSG 443
Query: 648 SGPISNNESDRTNINPF---YPFIPRQIQQSLNKS 743
+G IS+N SDRTNINPF Y + +IQ+SLN++
Sbjct: 444 AGLISDNGSDRTNINPFSFIYTYSKARIQESLNQN 478
Score = 59.7 bits (143), Expect(2) = e-101
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VR+ SIIGVDTQI LNTRSRVGGLVRVERKKK+
Sbjct: 236 VRBXSIIGVDTQITLNTRSRVGGLVRVERKKKR 268
>ref|YP_001109489.1| RNA polymerase beta'' subunit [Populus trichocarpa]
gi|212288340|sp|A4GYP8.1|RPOC2_POPTR RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|133712049|gb|ABO36692.1| RNA polymerase beta'' chain
[Populus trichocarpa]
Length = 1390
Score = 334 bits (856), Expect(2) = e-101
Identities = 174/226 (76%), Positives = 188/226 (83%), Gaps = 5/226 (2%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFP TDKISR+SGILIPPGTVKTNSKESKKVKNWIY+QRIT KK
Sbjct: 707 KKKKMELKIFSGDIHFPRATDKISRYSGILIPPGTVKTNSKESKKVKNWIYVQRITPTKK 766
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
K FVLVRPV+IYE DGINLE LFP DLLQEKENLKLR+VNYILYGNGK I+GIS+TSIQ
Sbjct: 767 KSFVLVRPVLIYERGDGINLERLFPPDLLQEKENLKLRIVNYILYGNGKPIQGISNTSIQ 826
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNW+QDKKSSSIEEAR FVEVS NGLI DFLRI+L KS ISYISRKRNDPSG
Sbjct: 827 LVRTCLVLNWNQDKKSSSIEEARVYFVEVSINGLIRDFLRIHLGKSRISYISRKRNDPSG 886
Query: 648 SGPISNNESDRTNINPFYPF-----IPRQIQQSLNKSDYSTCRRRS 770
G IS+N DRTNINPFY IP+ ++Q+ ST R+
Sbjct: 887 LGLISDNGPDRTNINPFYSIYSKTRIPQSLKQNQGTISISTLLNRN 932
Score = 62.4 bits (150), Expect(2) = e-101
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNT+SRVGGL+R+ERKKKK
Sbjct: 678 VRNNSIIGVDTQITLNTKSRVGGLIRIERKKKK 710
>ref|YP_665548.1| RNA polymerase beta'' subunit [Populus alba]
gi|122224632|sp|Q14FG7.1|RPOC2_POPAL RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|109945507|dbj|BAE97195.1| RNA polymerase beta II
subunit [Populus alba]
Length = 1390
Score = 334 bits (856), Expect(2) = e-101
Identities = 174/226 (76%), Positives = 188/226 (83%), Gaps = 5/226 (2%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKKKMELKIFSGDIHFP TDKISR+SGILIPPGTVKTNSKESKKVKNWIY+QRIT KK
Sbjct: 707 KKKKMELKIFSGDIHFPRATDKISRYSGILIPPGTVKTNSKESKKVKNWIYVQRITPTKK 766
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
K FVLVRPV+IYE DGINLE LFP DLLQEKENLKLR+VNYILYGNGK I+GIS+TSIQ
Sbjct: 767 KSFVLVRPVLIYERGDGINLERLFPPDLLQEKENLKLRIVNYILYGNGKPIQGISNTSIQ 826
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNW+QDKKSSSIEEAR FVEVS NGLI DFLRI+L KS ISYISRKRNDPSG
Sbjct: 827 LVRTCLVLNWNQDKKSSSIEEARVYFVEVSINGLIRDFLRIHLGKSRISYISRKRNDPSG 886
Query: 648 SGPISNNESDRTNINPFYPF-----IPRQIQQSLNKSDYSTCRRRS 770
G IS+N DRTNINPFY IP+ ++Q+ ST R+
Sbjct: 887 LGLISDNGPDRTNINPFYSIYSKTRIPQSLKQNQGTISISTLLNRN 932
Score = 62.4 bits (150), Expect(2) = e-101
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNT+SRVGGL+R+ERKKKK
Sbjct: 678 VRNNSIIGVDTQITLNTKSRVGGLIRIERKKKK 710
>gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis]
Length = 863
Score = 335 bits (860), Expect(2) = e-100
Identities = 173/213 (81%), Positives = 190/213 (89%)
Frame = +3
Query: 105 EKKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAK 284
+KKK++ELKIFSGDIHFPGETDKI+RHSGILIPPGT KTNSKESKK+KNWIY+QRIT K
Sbjct: 266 KKKKRIELKIFSGDIHFPGETDKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTK 325
Query: 285 KKYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSI 464
KKYFVLVRPV+ YEIADGINL TLF QDLLQE++N+KLRVVNYILYGNGK IRGISDTSI
Sbjct: 326 KKYFVLVRPVVTYEIADGINLATLFAQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSI 385
Query: 465 QLVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPS 644
QLV TCLVLNWDQDKKSSSI EA ASFVEV TNGLI DFLRI+L KS ISY + KRNDPS
Sbjct: 386 QLVRTCLVLNWDQDKKSSSIGEAHASFVEVRTNGLIRDFLRIDLVKSPISY-TGKRNDPS 444
Query: 645 GSGPISNNESDRTNINPFYPFIPRQIQQSLNKS 743
GSG IS+N SDRTNINPFY +IQQSL+++
Sbjct: 445 GSGLISDNGSDRTNINPFYS--KARIQQSLSQN 475
Score = 58.2 bits (139), Expect(2) = e-100
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDT+I LN RSRVGGLVRVE+KKK+
Sbjct: 238 VRNNSIIGVDTRITLNIRSRVGGLVRVEKKKKR 270
>gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liquidambar styraciflua]
Length = 1390
Score = 330 bits (846), Expect(2) = e-100
Identities = 169/213 (79%), Positives = 190/213 (89%), Gaps = 1/213 (0%)
Frame = +3
Query: 108 KKKKMELKIFSGDIHFPGETDKISRHSGILIPPGTVKTNSKESKKVKNWIYIQRITSAKK 287
KKK++ELKIFSGDIHFPGET+KI+RHSGILIPPGT KTNSKESKK+KNWIY+QRIT KK
Sbjct: 716 KKKRIELKIFSGDIHFPGETNKIARHSGILIPPGTGKTNSKESKKLKNWIYVQRITPTKK 775
Query: 288 KYFVLVRPVIIYEIADGINLETLFPQDLLQEKENLKLRVVNYILYGNGKLIRGISDTSIQ 467
K+FVLVRPV+ YEIADGINL TLFPQDLLQE++N+KLRVVNYILYGNGK IRGISDTSIQ
Sbjct: 776 KHFVLVRPVVTYEIADGINLATLFPQDLLQERDNMKLRVVNYILYGNGKPIRGISDTSIQ 835
Query: 468 LVHTCLVLNWDQDKKSSSIEEARASFVEVSTNGLICDFLRINLAKSHISYISRKRNDPSG 647
LV TCLVLNWDQDKKS+S EA ASFVEV TNGLI +FLRINL +S ISY + KRNDPSG
Sbjct: 836 LVRTCLVLNWDQDKKSASSGEAHASFVEVRTNGLIRNFLRINLVESPISY-TGKRNDPSG 894
Query: 648 SGPISNNESDRTNINPFY-PFIPRQIQQSLNKS 743
SG IS+N SDRTNINPFY + +IQQSL+++
Sbjct: 895 SGWISDNGSDRTNINPFYSTYSKERIQQSLSQN 927
Score = 63.2 bits (152), Expect(2) = e-100
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 20 VRNNSIIGVDTQIALNTRSRVGGLVRVERKKKK 118
VRNNSIIGVDTQI LNTRSRVGGLVRVERKKK+
Sbjct: 687 VRNNSIIGVDTQITLNTRSRVGGLVRVERKKKR 719