BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043569
         (560 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L...   119   1e-27
tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]              116   1e-25
ref|NP_001049479.1| Os03g0234200 [Oryza sativa Japonica Group] g...   119   4e-25
gb|EOY23660.1| Ubiquitin supergroup,Ribosomal protein L40e [Theo...   119   6e-25
ref|XP_002530306.1| ubiquitin, putative [Ricinus communis] gi|25...   119   6e-25
gb|AFK47149.1| unknown [Lotus japonicus]                              119   6e-25
ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...   119   6e-25
ref|NP_001237759.1| uncharacterized protein LOC100306626 [Glycin...   119   6e-25
gb|EMJ03953.1| hypothetical protein PRUPE_ppa013349mg [Prunus pe...   118   8e-25
ref|XP_003558419.1| PREDICTED: ubiquitin-60S ribosomal protein L...   118   1e-24
ref|XP_002273568.1| PREDICTED: ubiquitin-60S ribosomal protein L...   118   1e-24
ref|XP_006292019.1| hypothetical protein CARUB_v10018208mg [Caps...   117   1e-24
tpe|CAI56329.1| TPA: ubiquitin-60S ribosomal L40 fusion protein ...   117   1e-24
ref|NP_565836.1| 60S ribosomal protein L40-1 [Arabidopsis thalia...   117   1e-24
sp|P49636.2|RL40_NICSY RecName: Full=Ubiquitin-60S ribosomal pro...   117   1e-24
gb|ESW08482.1| hypothetical protein PHAVU_009G049400g [Phaseolus...   117   2e-24
ref|XP_002322818.1| predicted protein [Populus trichocarpa]           117   2e-24
ref|XP_002318470.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_002465593.1| hypothetical protein SORBIDRAFT_01g041800 [S...   116   3e-24
ref|XP_003602319.1| Ubiquitin [Medicago truncatula] gi|502111943...   116   3e-24

>ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
           sativus]
          Length = 208

 Score = 97.1 bits (240), Expect(2) = 1e-27
 Identities = 47/54 (87%), Positives = 50/54 (92%)
 Frame = -2

Query: 493 KPRSRTREGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVWRLRGGIIEP 332
           K + + +EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV RLRGGIIEP
Sbjct: 27  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEP 80



 Score = 52.4 bits (124), Expect(2) = 1e-27
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDK 474
           K L GKTITLEVESSDTIDNVKAKIQDK
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDK 33



 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 86  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 145

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 146 TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 204

Query: 197 KKIK 186
           KKIK
Sbjct: 205 KKIK 208


>tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
          Length = 205

 Score = 89.7 bits (221), Expect(2) = 1e-25
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 493 KPRSRTREGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVWRLRGGI 341
           K + + +EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV RLRGG+
Sbjct: 27  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 77



 Score = 52.4 bits (124), Expect(2) = 1e-25
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDK 474
           K L GKTITLEVESSDTIDNVKAKIQDK
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDK 33



 Score =  116 bits (291), Expect = 3e-24
 Identities = 69/124 (55%), Positives = 73/124 (58%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 82  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 141

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR K
Sbjct: 142 TLHLVLRLRGGIIEPSLQALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAK 200

Query: 197 KKIK 186
           KKIK
Sbjct: 201 KKIK 204


>ref|NP_001049479.1| Os03g0234200 [Oryza sativa Japonica Group]
           gi|302425019|sp|P0CH35.1|RL40B_ORYSJ RecName:
           Full=Ubiquitin-60S ribosomal protein L40-2; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40-2; AltName: Full=CEP52; Flags:
           Precursor gi|302595812|sp|P0CH34.1|RL40A_ORYSJ RecName:
           Full=Ubiquitin-60S ribosomal protein L40-1; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40-1; AltName: Full=CEP52; Flags:
           Precursor gi|303857|dbj|BAA02154.1| ubiquitin/ribosomal
           polyprotein [Oryza sativa Japonica Group]
           gi|13358806|dbj|BAB33149.1| ubiquitin fused to ribosomal
           protein L40 [Oryza sativa] gi|13358808|dbj|BAB33150.1|
           ubiquitin fused to ribosomal protein L40 [Oryza sativa]
           gi|52077170|dbj|BAD46215.1| ubiquitin / ribosomal
           protein CEP52 [Oryza sativa Japonica Group]
           gi|108707030|gb|ABF94825.1| ubiquitin fusion protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113547950|dbj|BAF11393.1| Os03g0234200 [Oryza sativa
           Japonica Group] gi|125606687|gb|EAZ45723.1| hypothetical
           protein OsJ_30399 [Oryza sativa Japonica Group]
           gi|218202661|gb|EEC85088.1| hypothetical protein
           OsI_32449 [Oryza sativa Indica Group]
          Length = 129

 Score =  119 bits (299), Expect = 4e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLQALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>gb|EOY23660.1| Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao]
          Length = 151

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 29  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 88

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 89  TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 147

Query: 197 KKIK 186
           KKIK
Sbjct: 148 KKIK 151


>ref|XP_002530306.1| ubiquitin, putative [Ricinus communis]
           gi|255578975|ref|XP_002530340.1| ubiquitin, putative
           [Ricinus communis] gi|356509194|ref|XP_003523336.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Glycine max] gi|356516113|ref|XP_003526741.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Glycine max] gi|356572584|ref|XP_003554448.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Glycine max] gi|449438865|ref|XP_004137208.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Cucumis sativus] gi|449456437|ref|XP_004145956.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Cucumis sativus] gi|449497417|ref|XP_004160396.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Cucumis sativus] gi|565475186|ref|XP_006295234.1|
           hypothetical protein CARUB_v10024320mg [Capsella
           rubella] gi|71040673|gb|AAZ20285.1| ubiquitin fusion
           protein [Arachis hypogaea] gi|147769165|emb|CAN60770.1|
           hypothetical protein VITISV_012429 [Vitis vinifera]
           gi|148908659|gb|ABR17437.1| unknown [Picea sitchensis]
           gi|223530144|gb|EEF32056.1| ubiquitin, putative [Ricinus
           communis] gi|223530162|gb|EEF32073.1| ubiquitin,
           putative [Ricinus communis] gi|284433784|gb|ADB85098.1|
           ubiquitin C variant [Jatropha curcas]
           gi|297740140|emb|CBI30322.3| unnamed protein product
           [Vitis vinifera] gi|330318561|gb|AEC10952.1| ubiquitin
           fusion protein [Camellia sinensis]
           gi|388516721|gb|AFK46422.1| unknown [Lotus japonicus]
           gi|482563942|gb|EOA28132.1| hypothetical protein
           CARUB_v10024320mg [Capsella rubella]
           gi|508716416|gb|EOY08313.1| Ubiquitin extension protein
           1 isoform 1 [Theobroma cacao]
           gi|557104907|gb|ESQ45241.1| hypothetical protein
           EUTSA_v10010818mg [Eutrema salsugineum]
           gi|557111958|gb|ESQ52242.1| hypothetical protein
           EUTSA_v10017417mg [Eutrema salsugineum]
           gi|557532215|gb|ESR43398.1| hypothetical protein
           CICLE_v10013083mg [Citrus clementina]
           gi|557543468|gb|ESR54446.1| hypothetical protein
           CICLE_v10022855mg [Citrus clementina]
           gi|561036386|gb|ESW34916.1| hypothetical protein
           PHAVU_001G191700g [Phaseolus vulgaris]
          Length = 128

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>gb|AFK47149.1| unknown [Lotus japonicus]
          Length = 128

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLTALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein L40
           [Vitis vinifera]
          Length = 228

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 106 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 165

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 166 TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 224

Query: 197 KKIK 186
           KKIK
Sbjct: 225 KKIK 228


>ref|NP_001237759.1| uncharacterized protein LOC100306626 [Glycine max]
           gi|255629117|gb|ACU14903.1| unknown [Glycine max]
          Length = 128

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>gb|EMJ03953.1| hypothetical protein PRUPE_ppa013349mg [Prunus persica]
           gi|462415058|gb|EMJ19795.1| hypothetical protein
           PRUPE_ppa013338mg [Prunus persica]
          Length = 128

 Score =  118 bits (296), Expect = 8e-25
 Identities = 69/124 (55%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KK+K
Sbjct: 125 KKVK 128


>ref|XP_003558419.1| PREDICTED: ubiquitin-60S ribosomal protein L40-2-like [Brachypodium
           distachyon] gi|357160177|ref|XP_003578682.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-2-like [Brachypodium
           distachyon] gi|473890022|gb|EMS48574.1| Ubiquitin-60S
           ribosomal protein L40-2 [Triticum urartu]
          Length = 129

 Score =  118 bits (295), Expect = 1e-24
 Identities = 69/124 (55%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLQALA-RKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_002273568.1| PREDICTED: ubiquitin-60S ribosomal protein L40-2 [Vitis vinifera]
           gi|302143958|emb|CBI23063.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  118 bits (295), Expect = 1e-24
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMQLA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_006292019.1| hypothetical protein CARUB_v10018208mg [Capsella rubella]
           gi|482560726|gb|EOA24917.1| hypothetical protein
           CARUB_v10018208mg [Capsella rubella]
          Length = 142

 Score =  117 bits (294), Expect = 1e-24
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 20  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 79

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 80  TLHLVLRLRGGIIEPSLMMLA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 138

Query: 197 KKIK 186
           KKIK
Sbjct: 139 KKIK 142


>tpe|CAI56329.1| TPA: ubiquitin-60S ribosomal L40 fusion protein [Vitis vinifera]
          Length = 128

 Score =  117 bits (294), Expect = 1e-24
 Identities = 76/131 (58%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK     G      R   A +    G       I
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDK----EGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 377 DSSSCLEA*GRDHRTFSHGIG*-------KKKNQDKMICRKCYARLHPRAVNCRKKKCGH 219
              S L       R    GI         +K NQDKMICRKCYARLHPRAVNCRKKKCGH
Sbjct: 62  QKESTLHL----VRRLRGGIIEPSLMQLARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 117

Query: 218 SNQLRPKKKIK 186
           SNQLRPKKKIK
Sbjct: 118 SNQLRPKKKIK 128


>ref|NP_565836.1| 60S ribosomal protein L40-1 [Arabidopsis thaliana]
           gi|18409639|ref|NP_566969.1| ubiquitin extension protein
           1 [Arabidopsis thaliana]
           gi|302425250|sp|Q42202.2|RL40B_ARATH RecName:
           Full=Ubiquitin-60S ribosomal protein L40-2; AltName:
           Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 16;
           AltName: Full=Protein EMBRYO DEFECTIVE 2167; AltName:
           Full=Protein HAPLESS 4; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=60S ribosomal
           protein L40-2; AltName: Full=CEP52; Flags: Precursor
           gi|302595860|sp|B9DHA6.1|RL40A_ARATH RecName:
           Full=Ubiquitin-60S ribosomal protein L40-1; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40-1; AltName: Full=CEP52; Flags:
           Precursor gi|13430798|gb|AAK26021.1|AF360311_1 putative
           ubiquitin extension protein UBQ2 [Arabidopsis thaliana]
           gi|166930|gb|AAA32904.1| ubiquitin extension protein
           (UBQ1) [Arabidopsis thaliana] gi|166932|gb|AAA32905.1|
           ubiquitin extension protein (UBQ2) [Arabidopsis
           thaliana] gi|4886268|emb|CAB43405.1| ubiquitin /
           ribosomal protein CEP52 [Arabidopsis thaliana]
           gi|14334950|gb|AAK59652.1| putative ubiquitin extension
           protein UBQ1 [Arabidopsis thaliana]
           gi|15810643|gb|AAL07246.1| putative ubiquitin extension
           protein UBQ2 [Arabidopsis thaliana]
           gi|16323384|gb|AAL15186.1| putative ubiquitin extension
           protein UBQ1 [Arabidopsis thaliana]
           gi|20198116|gb|AAM15407.1| ubiquitin extension protein
           (UBQ2) [Arabidopsis thaliana] gi|21553955|gb|AAM63036.1|
           ubiquitin extension protein UBQ1 [Arabidopsis thaliana]
           gi|222424333|dbj|BAH20123.1| AT2G36170 [Arabidopsis
           thaliana] gi|330254118|gb|AEC09212.1| 60S ribosomal
           protein L40-1 [Arabidopsis thaliana]
           gi|332645445|gb|AEE78966.1| ubiquitin extension protein
           1 [Arabidopsis thaliana]
          Length = 128

 Score =  117 bits (294), Expect = 1e-24
 Identities = 70/124 (56%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMMLA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>sp|P49636.2|RL40_NICSY RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40; AltName: Full=CEP52; Flags:
           Precursor gi|170217|gb|AAA34064.1| ubiquitin fusion
           protein [Nicotiana sylvestris]
          Length = 128

 Score =  117 bits (294), Expect = 1e-24
 Identities = 69/124 (55%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCR+KKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>gb|ESW08482.1| hypothetical protein PHAVU_009G049400g [Phaseolus vulgaris]
          Length = 128

 Score =  117 bits (293), Expect = 2e-24
 Identities = 69/124 (55%), Positives = 73/124 (58%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVK KIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_002322818.1| predicted protein [Populus trichocarpa]
          Length = 128

 Score =  117 bits (293), Expect = 2e-24
 Identities = 69/124 (55%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIERSLMALA-RKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_002318470.1| predicted protein [Populus trichocarpa]
           gi|224135055|ref|XP_002321972.1| predicted protein
           [Populus trichocarpa] gi|460368318|ref|XP_004230014.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Solanum lycopersicum] gi|460378491|ref|XP_004235004.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Solanum lycopersicum] gi|460398209|ref|XP_004244655.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Solanum lycopersicum] gi|460399867|ref|XP_004245458.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           isoform 1 [Solanum lycopersicum]
           gi|470135469|ref|XP_004303537.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-like [Fragaria vesca
           subsp. vesca] gi|470144560|ref|XP_004307922.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Fragaria vesca subsp. vesca]
           gi|565345340|ref|XP_006339755.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-like [Solanum
           tuberosum] gi|565353744|ref|XP_006343783.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-like [Solanum
           tuberosum] gi|565367694|ref|XP_006350492.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-like [Solanum
           tuberosum] gi|565371230|ref|XP_006352212.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-like [Solanum
           tuberosum] gi|565403819|ref|XP_006367353.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-like [Solanum
           tuberosum] gi|118484077|gb|ABK93924.1| unknown [Populus
           trichocarpa] gi|118485427|gb|ABK94570.1| unknown
           [Populus trichocarpa] gi|118488135|gb|ABK95887.1|
           unknown [Populus trichocarpa]
           gi|222859143|gb|EEE96690.1| UBIQUITIN EXTENSION protein
           1 [Populus trichocarpa] gi|222868968|gb|EEF06099.1|
           UBIQUITIN EXTENSION protein 1 [Populus trichocarpa]
           gi|321149957|gb|ADW66126.1| ubiquitin extension protein
           [Solanum nigrum] gi|399920239|gb|AFP55586.1| ubiquitin
           [Rosa rugosa] gi|550321070|gb|EEF04579.2| UBIQUITIN
           EXTENSION protein 1 [Populus trichocarpa]
          Length = 128

 Score =  117 bits (293), Expect = 2e-24
 Identities = 69/124 (55%), Positives = 74/124 (59%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_002465593.1| hypothetical protein SORBIDRAFT_01g041800 [Sorghum bicolor]
           gi|242043942|ref|XP_002459842.1| hypothetical protein
           SORBIDRAFT_02g012040 [Sorghum bicolor]
           gi|514727396|ref|XP_004956212.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-2-like [Setaria
           italica] gi|514820807|ref|XP_004985089.1| PREDICTED:
           ubiquitin-60S ribosomal protein L40-2-like [Setaria
           italica] gi|195605244|gb|ACG24452.1| ubiquitin fusion
           protein [Zea mays] gi|195605578|gb|ACG24619.1| ubiquitin
           fusion protein [Zea mays] gi|195606772|gb|ACG25216.1|
           ubiquitin fusion protein [Zea mays]
           gi|195611116|gb|ACG27388.1| ubiquitin fusion protein
           [Zea mays] gi|195617574|gb|ACG30617.1| ubiquitin fusion
           protein [Zea mays] gi|195638770|gb|ACG38853.1| ubiquitin
           fusion protein [Zea mays] gi|195639710|gb|ACG39323.1|
           ubiquitin fusion protein [Zea mays]
           gi|223943621|gb|ACN25894.1| unknown [Zea mays]
           gi|241919447|gb|EER92591.1| hypothetical protein
           SORBIDRAFT_01g041800 [Sorghum bicolor]
           gi|241923219|gb|EER96363.1| hypothetical protein
           SORBIDRAFT_02g012040 [Sorghum bicolor]
           gi|414589037|tpg|DAA39608.1| TPA: Ubiquitin fusion
           protein [Zea mays] gi|414865712|tpg|DAA44269.1| TPA:
           Ubiquitin fusion protein [Zea mays]
           gi|414865715|tpg|DAA44272.1| TPA: Ubiquitin fusion
           protein [Zea mays]
          Length = 129

 Score =  116 bits (291), Expect = 3e-24
 Identities = 69/124 (55%), Positives = 73/124 (58%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDKMICRKCYARLHPRAVNCRKKKCGHSNQLR K
Sbjct: 66  TLHLVLRLRGGIIEPSLQALA-RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRAK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128


>ref|XP_003602319.1| Ubiquitin [Medicago truncatula] gi|502111943|ref|XP_004494208.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Cicer arietinum] gi|502136515|ref|XP_004502715.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Cicer arietinum] gi|502172906|ref|XP_004515215.1|
           PREDICTED: ubiquitin-60S ribosomal protein L40-like
           [Cicer arietinum] gi|146403798|gb|ABQ32305.1| putative
           ubiquitin-conjugating enzyme [Artemisia annua]
           gi|217071300|gb|ACJ84010.1| unknown [Medicago
           truncatula] gi|355491367|gb|AES72570.1| Ubiquitin
           [Medicago truncatula] gi|388491220|gb|AFK33676.1|
           unknown [Medicago truncatula]
           gi|388492460|gb|AFK34296.1| unknown [Medicago
           truncatula] gi|388500420|gb|AFK38276.1| unknown
           [Medicago truncatula]
          Length = 128

 Score =  116 bits (291), Expect = 3e-24
 Identities = 69/124 (55%), Positives = 73/124 (58%)
 Frame = -1

Query: 557 KPLAGKTITLEVESSDTIDNVKAKIQDKGRNSTGPAETDFRWQAA*RWPNLGGLQYPERI 378
           K L GKTITLEVESSDTIDNVKAKIQDK           F  +       L      +  
Sbjct: 6   KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

Query: 377 DSSSCLEA*GRDHRTFSHGIG*KKKNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 198
                L   G         +  +K NQDK ICRKCYARLHPRAVNCRKKKCGHSNQLRPK
Sbjct: 66  TLHLVLRLRGGIIEPSLMALA-RKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124

Query: 197 KKIK 186
           KKIK
Sbjct: 125 KKIK 128