BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043475
         (878 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF03051.1| DNA ligase IV [Populus nigra]                          57   2e-10
gb|EEF03827.2| DNA ligase IV family protein [Populus trichocarpa]      54   2e-08
ref|XP_002325262.1| predicted protein [Populus trichocarpa]            54   2e-08
gb|ESR66480.1| hypothetical protein CICLE_v10007283mg [Citrus cl...    47   3e-06
gb|ESR66479.1| hypothetical protein CICLE_v10007283mg [Citrus cl...    47   3e-06

>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score = 57.0 bits (136), Expect(2) = 2e-10
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +3

Query: 15  YFYLPTPFLTPDWETLLGLKSRRLKLEVLMDGAYVSNLLQMLPICCIDNVGISTIDFDAL 194
           YF++    LTPDWE+LLGL  RRLKLE+ M G  VSN +       + NV  S +DF +L
Sbjct: 817 YFHISRESLTPDWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLNVPASDVDFGSL 876



 Score = 35.8 bits (81), Expect(2) = 2e-10
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +1

Query: 265  MDHSLKKPTKLDEHTYSLKPSGLAELNFENRSYDLDNDD 381
            ++ SL++  KL E TY+LKPSGL E N +    DLD ++
Sbjct: 901  LEDSLERGQKLLEDTYNLKPSGLEESNCKEIVCDLDMEE 939


>gb|EEF03827.2| DNA ligase IV family protein [Populus trichocarpa]
          Length = 1242

 Score = 53.5 bits (127), Expect(2) = 2e-08
 Identities = 28/60 (46%), Positives = 36/60 (60%)
 Frame = +3

Query: 15  YFYLPTPFLTPDWETLLGLKSRRLKLEVLMDGAYVSNLLQMLPICCIDNVGISTIDFDAL 194
           YF++    LTPDWE+LLGL  RRLKLE+ M G  VSN +       +  V  S +DF +L
Sbjct: 817 YFHISRESLTPDWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGSL 876



 Score = 32.0 bits (71), Expect(2) = 2e-08
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 265 MDHSLKKPTKLDEHTYSLKPSGLAELN 345
           ++ SL++  KL E TY+LKPSGL E N
Sbjct: 901 LEDSLERGQKLLEDTYNLKPSGLEESN 927


>ref|XP_002325262.1| predicted protein [Populus trichocarpa]
          Length = 1242

 Score = 53.5 bits (127), Expect(2) = 2e-08
 Identities = 28/60 (46%), Positives = 36/60 (60%)
 Frame = +3

Query: 15  YFYLPTPFLTPDWETLLGLKSRRLKLEVLMDGAYVSNLLQMLPICCIDNVGISTIDFDAL 194
           YF++    LTPDWE+LLGL  RRLKLE+ M G  VSN +       +  V  S +DF +L
Sbjct: 817 YFHISRESLTPDWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGSL 876



 Score = 32.0 bits (71), Expect(2) = 2e-08
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 265 MDHSLKKPTKLDEHTYSLKPSGLAELN 345
           ++ SL++  KL E TY+LKPSGL E N
Sbjct: 901 LEDSLERGQKLLEDTYNLKPSGLEESN 927


>gb|ESR66480.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
          Length = 1159

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 26/61 (42%), Positives = 35/61 (57%)
 Frame = +3

Query: 15  YFYLPTPFLTPDWETLLGLKSRRLKLEVLMDGAYVSNLLQMLPICCIDNVGISTIDFDAL 194
           YFY  T  L+PDWE +LGL  RRLKLE+   G  V N L       + +V    ++F++L
Sbjct: 809 YFYHSTEPLSPDWEVILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSL 868

Query: 195 T 197
           T
Sbjct: 869 T 869



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 265  MDHSLKKPTKLDEHTYSLKPSGLAELNFENRSYDLDNDD 381
            ++  L K  K +E+ YSLKP+G+ E   E    DLD ++
Sbjct: 893  LEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDMEE 931


>gb|ESR66479.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
          Length = 824

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 26/61 (42%), Positives = 35/61 (57%)
 Frame = +3

Query: 15  YFYLPTPFLTPDWETLLGLKSRRLKLEVLMDGAYVSNLLQMLPICCIDNVGISTIDFDAL 194
           YFY  T  L+PDWE +LGL  RRLKLE+   G  V N L       + +V    ++F++L
Sbjct: 474 YFYHSTEPLSPDWEVILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSL 533

Query: 195 T 197
           T
Sbjct: 534 T 534



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 265 MDHSLKKPTKLDEHTYSLKPSGLAELNFENRSYDLDNDD 381
           ++  L K  K +E+ YSLKP+G+ E   E    DLD ++
Sbjct: 558 LEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDMEE 596