BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043363
         (295 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002720104.1| rpoB [Jatropha curcas] gi|224979557|gb|ACN72...   184   1e-44
ref|YP_005090170.1| rpoB gene product (chloroplast) [Ricinus com...   182   3e-44
gb|AFR25652.1| RNA polymerase beta subunit (chloroplast) [Pentho...   178   5e-43
gb|AFU95607.1| RpoB, partial (chloroplast) [Microdesmis casearii...   177   9e-43
gb|AFU95584.1| RpoB, partial (chloroplast) [Caloncoba echinata]       177   9e-43
gb|AFU95581.1| RpoB, partial (chloroplast) [Bergia texana]            177   9e-43
ref|YP_001109491.1| RNA polymerase beta subunit [Populus trichoc...   177   1e-42
ref|YP_665550.1| RNA polymerase beta subunit [Populus alba] gi|1...   177   1e-42
ref|YP_008577825.1| RNA polymerase beta subunit (chloroplast) [C...   177   2e-42
ref|YP_008577655.1| RNA polymerase beta subunit (chloroplast) [C...   177   2e-42
ref|YP_001718429.1| RNA polymerase beta subunit [Manihot esculen...   177   2e-42
ref|YP_007475781.1| RNA polymerase beta subunit [Pseudophoenix v...   176   2e-42
gb|AFU95580.1| RpoB, partial (chloroplast) [Balanops pachyphylla]     176   3e-42
ref|YP_008575700.1| RNA polymerase beta subunit (chloroplast) [E...   176   4e-42
gb|AFU95610.1| RpoB, partial (chloroplast) [Pera bumeliifolia]        176   4e-42
ref|YP_008578165.1| RNA polymerase beta subunit (chloroplast) [S...   175   5e-42
ref|YP_008578080.1| RNA polymerase beta subunit (chloroplast) [A...   175   5e-42
ref|YP_008577995.1| RNA polymerase beta subunit (chloroplast) [A...   175   5e-42
ref|YP_008577910.1| RNA polymerase beta subunit (chloroplast) [A...   175   5e-42
ref|YP_008577570.1| RNA polymerase beta subunit (chloroplast) [C...   175   5e-42

>ref|YP_002720104.1| rpoB [Jatropha curcas] gi|224979557|gb|ACN72684.1| rpoB [Jatropha
           curcas]
          Length = 1072

 Score =  184 bits (467), Expect = 1e-44
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL
Sbjct: 215 KKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 274

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 275 DIPHNNTFLLPRDILAAADHLIGMKFGMG 303


>ref|YP_005090170.1| rpoB gene product (chloroplast) [Ricinus communis]
           gi|339516157|gb|AEJ82547.1| RNA polymerase beta subunit
           [Ricinus communis]
          Length = 1070

 Score =  182 bits (463), Expect = 3e-44
 Identities = 87/89 (97%), Positives = 89/89 (100%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL
Sbjct: 213 KKKIGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 273 DIPHNNTFLLPRDILAAADHLIGMKFGMG 301


>gb|AFR25652.1| RNA polymerase beta subunit (chloroplast) [Penthorum chinense]
          Length = 1070

 Score =  178 bits (452), Expect = 5e-43
 Identities = 85/89 (95%), Positives = 87/89 (97%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 213 KKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 273 DIPHNNTFLLPRDILAAADHLIGMKFGMG 301


>gb|AFU95607.1| RpoB, partial (chloroplast) [Microdesmis caseariifolia]
          Length = 1108

 Score =  177 bits (450), Expect = 9e-43
 Identities = 87/91 (95%), Positives = 89/91 (97%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EKKMG--SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 94
           +KK+G  SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL
Sbjct: 220 KKKIGXXSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 279

Query: 93  NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           NLDIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 280 NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 310


>gb|AFU95584.1| RpoB, partial (chloroplast) [Caloncoba echinata]
          Length = 1107

 Score =  177 bits (450), Expect = 9e-43
 Identities = 87/91 (95%), Positives = 89/91 (97%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EKKMG--SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 94
           +KK+G  SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL
Sbjct: 220 KKKIGXXSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 279

Query: 93  NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           NLDIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 280 NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 310


>gb|AFU95581.1| RpoB, partial (chloroplast) [Bergia texana]
          Length = 1108

 Score =  177 bits (450), Expect = 9e-43
 Identities = 87/91 (95%), Positives = 89/91 (97%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EKKMG--SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 94
           +KK+G  SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL
Sbjct: 220 KKKIGXXSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 279

Query: 93  NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           NLDIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 280 NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 310


>ref|YP_001109491.1| RNA polymerase beta subunit [Populus trichocarpa]
           gi|158513642|sp|A4GYQ0.1|RPOB_POPTR RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|133712051|gb|ABO36694.1| RNA polymerase beta chain
           [Populus trichocarpa]
          Length = 1070

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GS+ENAILEFYQQFTCVGG PVFSESLCKELQKKFFQQRCELGRIGRLNMN+RLNL
Sbjct: 213 KKKIGSRENAILEFYQQFTCVGGGPVFSESLCKELQKKFFQQRCELGRIGRLNMNQRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 273 DIPHNNTFLLPRDILAAADHLIGMKFGMG 301


>ref|YP_665550.1| RNA polymerase beta subunit [Populus alba]
           gi|122237048|sp|Q14FG5.1|RPOB_POPAL RecName:
           Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
           gi|109945509|dbj|BAE97197.1| RNA polymerase beta chain
           [Populus alba]
          Length = 1070

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GS+ENAILEFYQQFTCVGG PVFSESLCKELQKKFFQQRCELGRIGRLNMN+RLNL
Sbjct: 213 KKKIGSRENAILEFYQQFTCVGGGPVFSESLCKELQKKFFQQRCELGRIGRLNMNQRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 273 DIPHNNTFLLPRDILAAADHLIGMKFGMG 301


>ref|YP_008577825.1| RNA polymerase beta subunit (chloroplast) [Corymbia tessellaris]
           gi|442569069|gb|AGC59234.1| RNA polymerase beta subunit
           (chloroplast) [Corymbia tessellaris]
          Length = 1073

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/89 (95%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KKMGSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 214 KKKMGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 273

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 274 DIPQNNTFLLPRDILAAADHLIGMKFGMG 302


>ref|YP_008577655.1| RNA polymerase beta subunit (chloroplast) [Corymbia maculata]
           gi|545718903|ref|YP_008577740.1| RNA polymerase beta
           subunit (chloroplast) [Corymbia eximia]
           gi|442568897|gb|AGC59064.1| RNA polymerase beta subunit
           (chloroplast) [Corymbia maculata]
           gi|442568983|gb|AGC59149.1| RNA polymerase beta subunit
           (chloroplast) [Corymbia eximia]
          Length = 1073

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/89 (95%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KKMGSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 214 KKKMGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 273

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 274 DIPQNNTFLLPRDILAAADHLIGMKFGMG 302


>ref|YP_001718429.1| RNA polymerase beta subunit [Manihot esculenta]
           gi|157695877|gb|ABV66146.1| RNA polymerase beta subunit
           [Manihot esculenta]
          Length = 1070

 Score =  177 bits (448), Expect = 2e-42
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQFTCVGGDP+FSESLCKELQKKFFQQRCELG+IGRLNMNR+LNL
Sbjct: 213 KKKIGSKENAILEFYQQFTCVGGDPIFSESLCKELQKKFFQQRCELGKIGRLNMNRKLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIPHNNTFLLPRDILAAAD LIGMKFGMG
Sbjct: 273 DIPHNNTFLLPRDILAAADRLIGMKFGMG 301


>ref|YP_007475781.1| RNA polymerase beta subunit [Pseudophoenix vinifera]
           gi|449326262|gb|AGE92846.1| RNA polymerase beta subunit
           [Pseudophoenix vinifera]
          Length = 1068

 Score =  176 bits (447), Expect = 2e-42
 Identities = 84/89 (94%), Positives = 87/89 (97%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 211 KKKIGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 270

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRD+LAAADHLIGMKFGMG
Sbjct: 271 DIPQNNTFLLPRDLLAAADHLIGMKFGMG 299


>gb|AFU95580.1| RpoB, partial (chloroplast) [Balanops pachyphylla]
          Length = 1108

 Score =  176 bits (446), Expect = 3e-42
 Identities = 86/91 (94%), Positives = 89/91 (97%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EKKMG--SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 94
           ++K+G  SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL
Sbjct: 220 KQKIGXXSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRL 279

Query: 93  NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           NLDIPHNNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 280 NLDIPHNNTFLLPRDILAAADHLIGMKFGMG 310


>ref|YP_008575700.1| RNA polymerase beta subunit (chloroplast) [Eucalyptus elata]
           gi|442566747|gb|AGC56939.1| RNA polymerase beta subunit
           (chloroplast) [Eucalyptus elata]
          Length = 1072

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KKMGSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 213 KKKMGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIG+KFGMG
Sbjct: 273 DIPQNNTFLLPRDILAAADHLIGLKFGMG 301


>gb|AFU95610.1| RpoB, partial (chloroplast) [Pera bumeliifolia]
          Length = 882

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = -2

Query: 252 SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNLDIPHN 73
           SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNLDIPHN
Sbjct: 1   SKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNLDIPHN 60

Query: 72  NTFLLPRDILAAADHLIGMKFGMG 1
           NTFLLPRDILAAADHLIGMKFGMG
Sbjct: 61  NTFLLPRDILAAADHLIGMKFGMG 84


>ref|YP_008578165.1| RNA polymerase beta subunit (chloroplast) [Stockwellia quadrifida]
           gi|442569413|gb|AGC59574.1| RNA polymerase beta subunit
           (chloroplast) [Stockwellia quadrifida]
          Length = 1072

 Score =  175 bits (444), Expect = 5e-42
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 213 KKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 273 DIPQNNTFLLPRDILAAADHLIGMKFGMG 301


>ref|YP_008578080.1| RNA polymerase beta subunit (chloroplast) [Allosyncarpia ternata]
           gi|442569327|gb|AGC59489.1| RNA polymerase beta subunit
           (chloroplast) [Allosyncarpia ternata]
          Length = 1072

 Score =  175 bits (444), Expect = 5e-42
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 213 KKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 272

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 273 DIPQNNTFLLPRDILAAADHLIGMKFGMG 301


>ref|YP_008577995.1| RNA polymerase beta subunit (chloroplast) [Angophora costata]
           gi|442569241|gb|AGC59404.1| RNA polymerase beta subunit
           (chloroplast) [Angophora costata]
          Length = 1073

 Score =  175 bits (444), Expect = 5e-42
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 214 KKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 273

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 274 DIPQNNTFLLPRDILAAADHLIGMKFGMG 302


>ref|YP_008577910.1| RNA polymerase beta subunit (chloroplast) [Angophora floribunda]
           gi|442569155|gb|AGC59319.1| RNA polymerase beta subunit
           (chloroplast) [Angophora floribunda]
          Length = 1073

 Score =  175 bits (444), Expect = 5e-42
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 214 KKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 273

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 274 DIPQNNTFLLPRDILAAADHLIGMKFGMG 302


>ref|YP_008577570.1| RNA polymerase beta subunit (chloroplast) [Corymbia gummifera]
           gi|442568811|gb|AGC58979.1| RNA polymerase beta subunit
           (chloroplast) [Corymbia gummifera]
          Length = 1073

 Score =  175 bits (444), Expect = 5e-42
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = -2

Query: 267 EKKMGSKENAILEFYQQFTCVGGDPVFSESLCKELQKKFFQQRCELGRIGRLNMNRRLNL 88
           +KK+GSKENAILEFYQQF CVGGDPVFSESLCKELQKKFFQQRCELGRIGR NMNRRLNL
Sbjct: 214 KKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNL 273

Query: 87  DIPHNNTFLLPRDILAAADHLIGMKFGMG 1
           DIP NNTFLLPRDILAAADHLIGMKFGMG
Sbjct: 274 DIPQNNTFLLPRDILAAADHLIGMKFGMG 302