BLASTX nr result
ID: Jatropha_contig00043262
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00043262
(843 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago t... 91 2e-27
dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne] 90 6e-26
dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Diant... 88 2e-25
ref|XP_004507449.1| PREDICTED: glycine-rich RNA-binding protein ... 93 1e-24
ref|XP_004507450.1| PREDICTED: glycine-rich RNA-binding protein ... 93 1e-24
dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza] 118 2e-24
gb|AFK35888.1| unknown [Medicago truncatula] 72 2e-21
ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [... 101 3e-19
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis] 101 3e-19
ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299... 100 8e-19
ref|XP_003631659.1| PREDICTED: uncharacterized protein LOC100853... 77 1e-18
ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein ... 99 2e-18
gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus... 99 2e-18
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x... 98 4e-18
gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus t... 97 5e-18
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 97 5e-18
ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|1... 97 5e-18
ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299... 97 9e-18
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao] 96 1e-17
emb|CBI32594.3| unnamed protein product [Vitis vinifera] 96 1e-17
>ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding
protein [Medicago truncatula]
Length = 190
Score = 90.5 bits (223), Expect(2) = 2e-27
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +2
Query: 215 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
F +T+ K +INDRETGRSRGFGFVTF EKSMRDAIE MNGQ++DGRNITVNEAQSR
Sbjct: 31 FGEITDSK-VINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGRNITVNEAQSR 87
Score = 59.3 bits (142), Expect(2) = 2e-27
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
S+++EYRCFVGGLAWAT QAL +AFS +G+I +SKV
Sbjct: 3 SSDVEYRCFVGGLAWATDSQALEQAFSKFGEITDSKV 39
>dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 90.1 bits (222), Expect(2) = 6e-26
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +2
Query: 215 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
F +T+ K IINDRETGRSRGFGFVTF++ +SM++AIEGMNGQ+LDGRNITVNEAQSR
Sbjct: 28 FGEITDCK-IINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVNEAQSR 84
Score = 54.7 bits (130), Expect(2) = 6e-26
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +3
Query: 15 EYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
EYRCFVGGLAWAT DQ+L +AFS +G+I + K+
Sbjct: 4 EYRCFVGGLAWATNDQSLEQAFSQFGEITDCKI 36
>dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 87.8 bits (216), Expect(2) = 2e-25
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +2
Query: 215 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
F VT+ K IINDRETGRSRGFGFVTF NE+SMRDAI+ MNG+ LDGR+ITVNEAQSR
Sbjct: 29 FGEVTDSK-IINDRETGRSRGFGFVTFANEQSMRDAIDEMNGKELDGRSITVNEAQSR 85
Score = 55.5 bits (132), Expect(2) = 2e-25
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +3
Query: 6 AEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
AE+EYRCFVGGL+W T D++L EAF+ +G++ +SK+
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKI 37
>ref|XP_004507449.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like isoform X1
[Cicer arietinum]
Length = 166
Score = 92.8 bits (229), Expect(2) = 1e-24
Identities = 46/55 (83%), Positives = 52/55 (94%)
Frame = +2
Query: 224 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
VT+ K +INDRETGRSRGFGFVTF+ E+SMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 34 VTDSK-VINDRETGRSRGFGFVTFSTEQSMRDAIEGMNGQDVDGRNITVNEAQSR 87
Score = 47.8 bits (112), Expect(2) = 1e-24
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
S+ +EYRCFVGGLA AL +AFS+YG++ +SKV
Sbjct: 3 SSAVEYRCFVGGLAGPPDSDALAKAFSSYGEVTDSKV 39
>ref|XP_004507450.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like isoform X2
[Cicer arietinum]
Length = 152
Score = 92.8 bits (229), Expect(2) = 1e-24
Identities = 46/55 (83%), Positives = 52/55 (94%)
Frame = +2
Query: 224 VTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
VT+ K +INDRETGRSRGFGFVTF+ E+SMRDAIEGMNGQ++DGRNITVNEAQSR
Sbjct: 34 VTDSK-VINDRETGRSRGFGFVTFSTEQSMRDAIEGMNGQDVDGRNITVNEAQSR 87
Score = 47.8 bits (112), Expect(2) = 1e-24
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
S+ +EYRCFVGGLA AL +AFS+YG++ +SKV
Sbjct: 3 SSAVEYRCFVGGLAGPPDSDALAKAFSSYGEVTDSKV 39
>dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
Length = 163
Score = 118 bits (296), Expect = 2e-24
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +2
Query: 182 ICLCYYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 361
+C+ + FYVTNL+SIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN
Sbjct: 22 VCVTIICVTTVLFYVTNLQSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 81
Query: 362 ITVNEAQSR 388
ITVNEAQSR
Sbjct: 82 ITVNEAQSR 90
>gb|AFK35888.1| unknown [Medicago truncatula]
Length = 92
Score = 72.0 bits (175), Expect(2) = 2e-21
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 215 FFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGR 358
F +T+ K +INDRETGRSRGFGFVTF EKSMRDAIE MNGQ++DGR
Sbjct: 31 FGEITDSK-VINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGR 77
Score = 57.8 bits (138), Expect(2) = 2e-21
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
S+++EYRCFVGGLAWAT +AL +AFS +G+I +SKV
Sbjct: 3 SSDVEYRCFVGGLAWATDSRALEQAFSKFGEITDSKV 39
>ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 166
Score = 101 bits (252), Expect = 3e-19
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 68.2 bits (165), Expect = 3e-09
Identities = 29/37 (78%), Positives = 36/37 (97%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
+A+IEYRCFVGGLAWAT+D+AL EAFSAYG++LESK+
Sbjct: 3 AADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKI 39
>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 101 bits (252), Expect = 3e-19
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 68.2 bits (165), Expect = 3e-09
Identities = 29/37 (78%), Positives = 36/37 (97%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
+A+IEYRCFVGGLAWAT+D+AL EAFSAYG++LESK+
Sbjct: 3 AADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKI 39
>ref|XP_004289674.1| PREDICTED: uncharacterized protein LOC101299909 isoform 2 [Fragaria
vesca subsp. vesca]
Length = 161
Score = 100 bits (248), Expect = 8e-19
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = +2
Query: 182 ICLCYYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRN 361
+ +C+Y S + + + IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRN
Sbjct: 6 VTICHYDSCV---FAISQNRIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRN 62
Query: 362 ITVNEAQSR 388
ITVNEAQSR
Sbjct: 63 ITVNEAQSR 71
>ref|XP_003631659.1| PREDICTED: uncharacterized protein LOC100853713 [Vitis vinifera]
Length = 80
Score = 77.4 bits (189), Expect(2) = 1e-18
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -1
Query: 363 ILRPSRFWPFIPSIASLIDFSLLKVTNPKPRDLPVSRSLMIDLR 232
+LRPSRFWPFIPS+ASLID SLL VTNPKP DLPVSRSLMI LR
Sbjct: 1 MLRPSRFWPFIPSMASLIDCSLLNVTNPKPLDLPVSRSLMIYLR 44
Score = 42.7 bits (99), Expect(2) = 1e-18
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = -2
Query: 110 LRFKDVAVGTKGFVEGLVGCGPGEAADEAPILDLCR 3
LRFK++A T+ +EGLV GP E +DEA +LDLCR
Sbjct: 43 LRFKNLAKLTESPLEGLVVGGPSEPSDEASVLDLCR 78
>ref|XP_006339763.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like, partial
[Solanum tuberosum]
Length = 182
Score = 98.6 bits (244), Expect = 2e-18
Identities = 51/71 (71%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +2
Query: 182 ICLC--YYISVLLFFYVTNLKSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDG 355
IC C +Y+ + FF IINDRETGRSRGFGFVTF +EKSMR+AIE MNGQNLDG
Sbjct: 6 ICNCGSFYLPICFFF------QIINDRETGRSRGFGFVTFTDEKSMRNAIEAMNGQNLDG 59
Query: 356 RNITVNEAQSR 388
RNITVNEAQSR
Sbjct: 60 RNITVNEAQSR 70
>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 98.6 bits (244), Expect = 2e-18
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 60.1 bits (144), Expect = 9e-07
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
SAEIE+RCFVGGLAWAT + AL AFS +G+I+ESK+
Sbjct: 3 SAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKI 39
>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
protein 2 [Pelargonium x hortorum]
Length = 166
Score = 97.8 bits (242), Expect = 4e-18
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTF+NEKSM DAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 63.5 bits (153), Expect = 8e-08
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
SA++EYRCFVGGLAWAT D AL +AFS YG+++ESK+
Sbjct: 3 SADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKI 39
>gb|ERP62303.1| hypothetical protein POPTR_0004s16260g [Populus trichocarpa]
Length = 158
Score = 97.4 bits (241), Expect = 5e-18
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQSR
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQSR 86
Score = 67.4 bits (163), Expect = 6e-09
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
+AE+EYRCFVGGLAWATTDQ+L EAFS YG+I++SK+
Sbjct: 2 AAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKI 38
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 97.4 bits (241), Expect = 5e-18
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTF +EKSMRDAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 72.4 bits (176), Expect = 2e-10
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
SA++E+RCFVGGLAWATTD +LHEAFSAYGDILESK+
Sbjct: 3 SADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKI 39
>ref|XP_002305429.1| predicted protein [Populus trichocarpa] gi|118481826|gb|ABK92850.1|
unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 165
Score = 97.4 bits (241), Expect = 5e-18
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTFNNEK+MRDAI+GMNGQ+LDGRNITVNEAQSR
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQSR 86
Score = 67.4 bits (163), Expect = 6e-09
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
+AE+EYRCFVGGLAWATTDQ+L EAFS YG+I++SK+
Sbjct: 2 AAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKI 38
>ref|XP_004289673.1| PREDICTED: uncharacterized protein LOC101299909 isoform 1 [Fragaria
vesca subsp. vesca]
Length = 177
Score = 96.7 bits (239), Expect = 9e-18
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTF+NEK+MRDAIEGMNGQ+LDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQDLDGRNITVNEAQSR 87
Score = 58.9 bits (141), Expect = 2e-06
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
SAEIE+RCFVGGLAWAT + AL AF+ +G+I+ESK+
Sbjct: 3 SAEIEFRCFVGGLAWATDNDALERAFAPFGEIIESKI 39
>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
Length = 168
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTF +EK+MRDAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 63.2 bits (152), Expect = 1e-07
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
SA+IE+RCFVGGLAWAT D+AL +AFS YG+I+ESK+
Sbjct: 3 SADIEFRCFVGGLAWATDDRALEQAFSQYGEIVESKI 39
>emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 242 IINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQSR 388
IINDRETGRSRGFGFVTF++E+SMRDAIEGMNGQNLDGRNITVNEAQSR
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQSR 87
Score = 65.1 bits (157), Expect = 3e-08
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 3 SAEIEYRCFVGGLAWATTDQALHEAFSAYGDILESKV 113
SAEIEYRCFVGGLAWAT DQ+L AFS +G+ILESK+
Sbjct: 3 SAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKI 39