BLASTX nr result

ID: Jatropha_contig00043208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043208
         (836 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF06007.2| hydroxyproline-rich glycoprotein [Populus trichoc...    76   1e-11
ref|XP_002321880.1| predicted protein [Populus trichocarpa]            75   4e-11
ref|XP_002523666.1| conserved hypothetical protein [Ricinus comm...    64   8e-08

>gb|EEF06007.2| hydroxyproline-rich glycoprotein [Populus trichocarpa]
          Length = 466

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 57/158 (36%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
 Frame = +3

Query: 156 QFDFTAPSKPDTNDSKTESSYRPQQPAGIGHGRGRP----PILPAFXXXXXXXXXXXXAT 323
           ++   AP KPD ++SKTESS    QP+G+GHGRG+P    PILPAF              
Sbjct: 56  EYGAAAPGKPDLDESKTESS--ESQPSGLGHGRGKPVGTGPILPAFSTFISSVKNSQPGA 113

Query: 324 GRGRG------------------------NLPSAVESGVGRGKLDKPV--AAPTNQEDEE 425
           GRGRG                        NLP ++ SG+G     KPV    P     EE
Sbjct: 114 GRGRGTTEPGPSRSTESRPESEPPKKAEANLPPSILSGLGGAGRGKPVKQEVPIEPAKEE 173

Query: 426 NRHIRF----SSNGRTRRLVVEKPDKPVAASTNQER*E 527
           NRH+R      S  RTR+      D  V A+T   R E
Sbjct: 174 NRHLRARSQPRSQPRTRQQKTPDGDDAVPATTKMGRQE 211


>ref|XP_002321880.1| predicted protein [Populus trichocarpa]
          Length = 466

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 55/152 (36%), Positives = 68/152 (44%), Gaps = 34/152 (22%)
 Frame = +3

Query: 156 QFDFTAPSKPDTNDSKTESSYRPQQPAGIGHGRGRP----PILPAFXXXXXXXXXXXXAT 323
           ++   AP KPD ++SKTESS    QP+G+GHGRG+P    PILPAF              
Sbjct: 56  EYGAAAPGKPDLDESKTESS--ESQPSGLGHGRGKPVGTGPILPAFSTFISSVKNSQPGA 113

Query: 324 GRGRG------------------------NLPSAVESGVGRGKLDKPV--AAPTNQEDEE 425
           GRGRG                        NLP ++ SG+G     KPV    P     EE
Sbjct: 114 GRGRGTTEPGPSRSTESRPESEPPKKAEANLPPSILSGLGGAGRGKPVKQEVPIEPAKEE 173

Query: 426 NRHIRF----SSNGRTRRLVVEKPDKPVAAST 509
           NRH+R      S  RTR+      D  V A+T
Sbjct: 174 NRHLRARSQPRSQPRTRQQKTPDGDDAVPATT 205


>ref|XP_002523666.1| conserved hypothetical protein [Ricinus communis]
           gi|223537066|gb|EEF38701.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 70/215 (32%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
 Frame = +3

Query: 6   MIGNP-IAKRVSNP----STRQAFFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFDFT 170
           M GNP IA+R+ NP    S++Q FFL                              FDFT
Sbjct: 1   MRGNPMIARRIPNPISNLSSKQPFFLSSSSFSTSSSGGGGGGRGRGSNPNL-----FDFT 55

Query: 171 --APSKPDTNDSKTESSYRPQQPA------GIGHGRGRP-PILPAFXXXXXXXXXXXXAT 323
             AP+KP+++D   +  Y P  P       G+GHG G   PILPAF             T
Sbjct: 56  GKAPAKPESSDV-AKPHYPPPPPPPPPPRNGVGHGHGGGNPILPAFSSFVSSIGRGRAIT 114

Query: 324 GRGRGN------------LPSAVES---GVGRGKLDKPVAAPTNQEDEENRHIRFSSNGR 458
               G             LPS + S   G GRG+ DKPV  PT Q  EENRHIR  S  +
Sbjct: 115 DPEPGPSRQPTESQSDSVLPSTIHSSLSGFGRGEPDKPVV-PTPQVKEENRHIRDRSRAK 173

Query: 459 TRRLVVEKPDKPVAASTNQER*ENRHIRFRSHGRT 563
            +    E   KP     ++E    R +   S G T
Sbjct: 174 PKTEEAEVRAKP---KISREEAVKRAVSILSQGDT 205


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