BLASTX nr result

ID: Jatropha_contig00043087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043087
         (835 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL87351.1| hypothetical protein S18_1082_0001 [uncultured F...    68   4e-09
gb|ADJ00052.1| chloramphenicol acetyltransferase [Promoter probe...    62   2e-07
ref|WP_004989554.1| conserved hypothetical protein [Streptomyces...    62   2e-07
ref|WP_007851439.1| hypothetical protein, partial [Bacteroides d...    60   1e-06
emb|CBL87507.1| hypothetical protein S18_873_0002 [uncultured Fl...    60   1e-06
emb|CAL37000.1| putative reverse transcriptase [Platanus x aceri...    60   1e-06
emb|CAD59768.1| putative reverse transcriptase [Cicer arietinum]       60   1e-06
ref|WP_001302813.1| hypothetical protein [Escherichia coli] gi|1...    57   6e-06

>emb|CBL87351.1| hypothetical protein S18_1082_0001 [uncultured Flavobacteriia
           bacterium] gi|330752692|emb|CBL88156.1| hypothetical
           protein S18_1087_0001 [uncultured Leeuwenhoekiella sp.]
          Length = 99

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +2

Query: 38  LGCLMSELTHINCVALTARFPVGKPVVPAALM 133
           +GCLMSELTHINCVALTARFPVGKPVVPAALM
Sbjct: 1   MGCLMSELTHINCVALTARFPVGKPVVPAALM 32


>gb|ADJ00052.1| chloramphenicol acetyltransferase [Promoter probe vector
           pEvoGlowRed] gi|299008154|gb|ADJ00076.1| chloramphenicol
           acetyltransferase [Reporter vector pGlowRed]
          Length = 339

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +2

Query: 44  CLMSELTHINCVALTARFPVGKPVVPAALM 133
           CLMSELT+INCVALTARFPVGKPVVPAALM
Sbjct: 255 CLMSELTYINCVALTARFPVGKPVVPAALM 284


>ref|WP_004989554.1| conserved hypothetical protein [Streptomyces ghanaensis]
           gi|118132570|gb|ABK60177.1| putative reverse
           transcriptase [Zingiber officinale]
           gi|291343216|gb|EFE70172.1| conserved hypothetical
           protein [Streptomyces ghanaensis ATCC 14672]
          Length = 49

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/47 (68%), Positives = 33/47 (70%)
 Frame = +2

Query: 50  MSELTHINCVALTARFPVGKPVVPAALMYXXXXXXXXXXXXELYRFL 190
           MSELTHINCVALTARFPVGKPVVPAALM              L+RFL
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYWALFRFL 47


>ref|WP_007851439.1| hypothetical protein, partial [Bacteroides dorei]
           gi|392621938|gb|EIY16078.1| hypothetical protein
           HMPREF1063_05178, partial [Bacteroides dorei CL02T00C15]
          Length = 54

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +2

Query: 50  MSELTHINCVALTARFPVGKPVVPAALM 133
           MSELTHINCVALTARFPVGKPVVPAALM
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALM 28


>emb|CBL87507.1| hypothetical protein S18_873_0002 [uncultured Flavobacteriia
           bacterium]
          Length = 95

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +2

Query: 50  MSELTHINCVALTARFPVGKPVVPAALM 133
           MSELTHINCVALTARFPVGKPVVPAALM
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALM 28


>emb|CAL37000.1| putative reverse transcriptase [Platanus x acerifolia]
          Length = 30

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +2

Query: 50  MSELTHINCVALTARFPVGKPVVPAALM 133
           MSELTHINCVALTARFPVGKPVVPAALM
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALM 28


>emb|CAD59768.1| putative reverse transcriptase [Cicer arietinum]
          Length = 35

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +2

Query: 50  MSELTHINCVALTARFPVGKPVVPAALM 133
           MSELTHINCVALTARFPVGKPVVPAALM
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALM 28


>ref|WP_001302813.1| hypothetical protein [Escherichia coli] gi|189367716|gb|EDU86132.1|
           hypothetical protein ECH7EC4501_1546 [Escherichia coli
           O157:H7 str. EC4501]
          Length = 41

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = -1

Query: 148 PRCPIH*GSWHDRFPDWKAGSERNAINVS*LTH 50
           P    H  SWHD+FPDWKAGSERNAINVS LTH
Sbjct: 9   PSLIFHLSSWHDKFPDWKAGSERNAINVSQLTH 41


Top