BLASTX nr result

ID: Jatropha_contig00043042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00043042
         (445 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   104   1e-20
gb|EEE86814.2| hypothetical protein POPTR_0009s15800g [Populus t...   102   6e-20
ref|XP_002312859.1| predicted protein [Populus trichocarpa]           102   6e-20
gb|ERP62516.1| hypothetical protein POPTR_0004s20480g [Populus t...   100   1e-19
ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|5...   100   1e-19
gb|EOX93676.1| Mediator of RNA polymerase II transcription subun...    99   7e-19
gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus pe...    99   7e-19
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...    95   1e-17
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...    95   1e-17
gb|ESW07209.1| hypothetical protein PHAVU_010G110800g [Phaseolus...    94   2e-17
gb|ACJ86166.1| unknown [Medicago truncatula] gi|388496780|gb|AFK...    94   2e-17
ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II tra...    92   5e-17
gb|AAR20782.1| At5g12230 [Arabidopsis thaliana] gi|44681434|gb|A...    92   7e-17
ref|NP_196784.1| uncharacterized protein [Arabidopsis thaliana] ...    92   7e-17
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...    92   9e-17
ref|XP_002873556.1| hypothetical protein ARALYDRAFT_488066 [Arab...    91   1e-16
ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251...    90   3e-16
emb|CBI38298.3| unnamed protein product [Vitis vinifera]               90   3e-16
ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II tra...    87   2e-15
ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II tra...    87   2e-15

>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  104 bits (259), Expect = 1e-20
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSGGDHSKKHH+KKR HDGDEDLNDVHKHKKS HK S+IDEIG+I+VAG
Sbjct: 170 GHHDSGGDHSKKHHDKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIKVAG 221


>gb|EEE86814.2| hypothetical protein POPTR_0009s15800g [Populus trichocarpa]
          Length = 218

 Score =  102 bits (253), Expect = 6e-20
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHHEKKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 167 GHHDSGADHSKKHHEKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 218


>ref|XP_002312859.1| predicted protein [Populus trichocarpa]
          Length = 218

 Score =  102 bits (253), Expect = 6e-20
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHHEKKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 167 GHHDSGADHSKKHHEKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 218


>gb|ERP62516.1| hypothetical protein POPTR_0004s20480g [Populus trichocarpa]
           gi|550341488|gb|ERP62517.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
          Length = 221

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHH+KKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 170 GHHDSGADHSKKHHDKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 221


>ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|550341486|gb|ERP62515.1|
           hypothetical protein POPTR_0004s20480g [Populus
           trichocarpa]
          Length = 220

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHH+KKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 169 GHHDSGADHSKKHHDKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 220


>gb|EOX93676.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
           cacao]
          Length = 221

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHHEKKR HDGDEDLNDVH+HKKS  K S+IDE+G+I+VAG
Sbjct: 170 GHHDSGADHSKKHHEKKRKHDGDEDLNDVHRHKKSKQKSSKIDEVGAIKVAG 221


>gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus persica]
          Length = 217

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHH+S GDHSKKHHEKKR HDGDEDLNDVH+HKKS HK ++IDE+G+IRVAG
Sbjct: 166 GHHESTGDHSKKHHEKKRKHDGDEDLNDVHRHKKSKHKSAKIDEMGAIRVAG 217


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GH DS  DHSKKHHEKKR HDGD+D+NDVHKHKKS HK S+IDE+G+I+VAG
Sbjct: 171 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKKSKHKSSKIDELGAIKVAG 222


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GH DS  DHSKKHHEKKR HDGD+D+NDVHKHKKS HK S+IDE+G+I+VAG
Sbjct: 172 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKKSKHKSSKIDELGAIKVAG 223


>gb|ESW07209.1| hypothetical protein PHAVU_010G110800g [Phaseolus vulgaris]
          Length = 223

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GH DS  DHSKKHHEKKR HDGD+D+NDVHKHK+S HK S+IDE+G+I+VAG
Sbjct: 172 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKRSKHKSSKIDELGAIKVAG 223


>gb|ACJ86166.1| unknown [Medicago truncatula] gi|388496780|gb|AFK36456.1| unknown
           [Medicago truncatula] gi|388499314|gb|AFK37723.1|
           unknown [Medicago truncatula]
          Length = 160

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GH DS  DHSKKHHEKKR HDGD+D NDVHKHKKS HK S IDE+G+I+VAG
Sbjct: 109 GHRDSSADHSKKHHEKKREHDGDDDANDVHKHKKSKHKSSRIDELGAIKVAG 160


>ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X3 [Solanum tuberosum]
          Length = 219

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 88  HHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           HHDSG D SKKHHEKKR HDG+E+LNDVHKHK+S HK S+IDEIG+I+VAG
Sbjct: 169 HHDSGADLSKKHHEKKRKHDGEEELNDVHKHKRSKHKSSKIDEIGAIKVAG 219


>gb|AAR20782.1| At5g12230 [Arabidopsis thaliana] gi|44681434|gb|AAS47657.1|
           At5g12230 [Arabidopsis thaliana]
          Length = 238

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHH+KKR HDGDEDLNDV +HKK+ HK S++DE+G+IRVAG
Sbjct: 188 GHHDSG-DHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG 238


>ref|NP_196784.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75171705|sp|Q9FMP0.1|MD19A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           19a gi|9759390|dbj|BAB10041.1| unnamed protein product
           [Arabidopsis thaliana] gi|332004395|gb|AED91778.1|
           uncharacterized protein AT5G12230 [Arabidopsis thaliana]
          Length = 221

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHH+KKR HDGDEDLNDV +HKK+ HK S++DE+G+IRVAG
Sbjct: 171 GHHDSG-DHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG 221


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 37/52 (71%), Positives = 46/52 (88%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GH DSG DHSKKHHEKKR HDG++D+ND+H+HKKS HK S+I+E+G I+VAG
Sbjct: 168 GHQDSGADHSKKHHEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKVAG 219


>ref|XP_002873556.1| hypothetical protein ARALYDRAFT_488066 [Arabidopsis lyrata subsp.
           lyrata] gi|297319393|gb|EFH49815.1| hypothetical protein
           ARALYDRAFT_488066 [Arabidopsis lyrata subsp. lyrata]
          Length = 221

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           GHHDSG DHSKKHH+KKR HDGDEDLNDV +HKK+ HK S++DE+G+IRVAG
Sbjct: 171 GHHDSG-DHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEMGAIRVAG 221


>ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251197 [Vitis vinifera]
          Length = 194

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           G HDS  DHSKKHHEKKR HDG+ED+ND+ +HKKS HK S+IDE+G+I+VAG
Sbjct: 143 GQHDSAADHSKKHHEKKRKHDGEEDVNDIQRHKKSKHKSSKIDELGAIKVAG 194


>emb|CBI38298.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = +1

Query: 85  GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
           G HDS  DHSKKHHEKKR HDG+ED+ND+ +HKKS HK S+IDE+G+I+VAG
Sbjct: 153 GQHDSAADHSKKHHEKKRKHDGEEDVNDIQRHKKSKHKSSKIDELGAIKVAG 204


>ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X4 [Solanum tuberosum]
          Length = 218

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +1

Query: 88  HHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRV 234
           HHDSG D SKKHHEKKR HDG+E+LNDVHKHK+S HK S+IDEIG+I++
Sbjct: 169 HHDSGADLSKKHHEKKRKHDGEEELNDVHKHKRSKHKSSKIDEIGAIKL 217


>ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X1 [Solanum tuberosum]
           gi|565354889|ref|XP_006344341.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X2 [Solanum tuberosum]
          Length = 220

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 37/48 (77%), Positives = 43/48 (89%)
 Frame = +1

Query: 88  HHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIR 231
           HHDSG D SKKHHEKKR HDG+E+LNDVHKHK+S HK S+IDEIG+I+
Sbjct: 169 HHDSGADLSKKHHEKKRKHDGEEELNDVHKHKRSKHKSSKIDEIGAIK 216


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