BLASTX nr result
ID: Jatropha_contig00043042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00043042
(445 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu... 104 1e-20
gb|EEE86814.2| hypothetical protein POPTR_0009s15800g [Populus t... 102 6e-20
ref|XP_002312859.1| predicted protein [Populus trichocarpa] 102 6e-20
gb|ERP62516.1| hypothetical protein POPTR_0004s20480g [Populus t... 100 1e-19
ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|5... 100 1e-19
gb|EOX93676.1| Mediator of RNA polymerase II transcription subun... 99 7e-19
gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus pe... 99 7e-19
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818... 95 1e-17
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814... 95 1e-17
gb|ESW07209.1| hypothetical protein PHAVU_010G110800g [Phaseolus... 94 2e-17
gb|ACJ86166.1| unknown [Medicago truncatula] gi|388496780|gb|AFK... 94 2e-17
ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II tra... 92 5e-17
gb|AAR20782.1| At5g12230 [Arabidopsis thaliana] gi|44681434|gb|A... 92 7e-17
ref|NP_196784.1| uncharacterized protein [Arabidopsis thaliana] ... 92 7e-17
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra... 92 9e-17
ref|XP_002873556.1| hypothetical protein ARALYDRAFT_488066 [Arab... 91 1e-16
ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251... 90 3e-16
emb|CBI38298.3| unnamed protein product [Vitis vinifera] 90 3e-16
ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II tra... 87 2e-15
ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II tra... 87 2e-15
>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
gi|223527846|gb|EEF29942.1| RNA binding protein,
putative [Ricinus communis]
Length = 221
Score = 104 bits (259), Expect = 1e-20
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSGGDHSKKHH+KKR HDGDEDLNDVHKHKKS HK S+IDEIG+I+VAG
Sbjct: 170 GHHDSGGDHSKKHHDKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIKVAG 221
>gb|EEE86814.2| hypothetical protein POPTR_0009s15800g [Populus trichocarpa]
Length = 218
Score = 102 bits (253), Expect = 6e-20
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHHEKKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 167 GHHDSGADHSKKHHEKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 218
>ref|XP_002312859.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 102 bits (253), Expect = 6e-20
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHHEKKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 167 GHHDSGADHSKKHHEKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 218
>gb|ERP62516.1| hypothetical protein POPTR_0004s20480g [Populus trichocarpa]
gi|550341488|gb|ERP62517.1| hypothetical protein
POPTR_0004s20480g [Populus trichocarpa]
Length = 221
Score = 100 bits (250), Expect = 1e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHH+KKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 170 GHHDSGADHSKKHHDKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 221
>ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|550341486|gb|ERP62515.1|
hypothetical protein POPTR_0004s20480g [Populus
trichocarpa]
Length = 220
Score = 100 bits (250), Expect = 1e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHH+KKR HDGDEDLNDVHKHKKS HK S+IDEIG I+VAG
Sbjct: 169 GHHDSGADHSKKHHDKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 220
>gb|EOX93676.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
cacao]
Length = 221
Score = 98.6 bits (244), Expect = 7e-19
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHHEKKR HDGDEDLNDVH+HKKS K S+IDE+G+I+VAG
Sbjct: 170 GHHDSGADHSKKHHEKKRKHDGDEDLNDVHRHKKSKQKSSKIDEVGAIKVAG 221
>gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus persica]
Length = 217
Score = 98.6 bits (244), Expect = 7e-19
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHH+S GDHSKKHHEKKR HDGDEDLNDVH+HKKS HK ++IDE+G+IRVAG
Sbjct: 166 GHHESTGDHSKKHHEKKRKHDGDEDLNDVHRHKKSKHKSAKIDEMGAIRVAG 217
>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
Length = 222
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GH DS DHSKKHHEKKR HDGD+D+NDVHKHKKS HK S+IDE+G+I+VAG
Sbjct: 171 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKKSKHKSSKIDELGAIKVAG 222
>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
Length = 223
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GH DS DHSKKHHEKKR HDGD+D+NDVHKHKKS HK S+IDE+G+I+VAG
Sbjct: 172 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKKSKHKSSKIDELGAIKVAG 223
>gb|ESW07209.1| hypothetical protein PHAVU_010G110800g [Phaseolus vulgaris]
Length = 223
Score = 93.6 bits (231), Expect = 2e-17
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GH DS DHSKKHHEKKR HDGD+D+NDVHKHK+S HK S+IDE+G+I+VAG
Sbjct: 172 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKRSKHKSSKIDELGAIKVAG 223
>gb|ACJ86166.1| unknown [Medicago truncatula] gi|388496780|gb|AFK36456.1| unknown
[Medicago truncatula] gi|388499314|gb|AFK37723.1|
unknown [Medicago truncatula]
Length = 160
Score = 93.6 bits (231), Expect = 2e-17
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GH DS DHSKKHHEKKR HDGD+D NDVHKHKKS HK S IDE+G+I+VAG
Sbjct: 109 GHRDSSADHSKKHHEKKREHDGDDDANDVHKHKKSKHKSSRIDELGAIKVAG 160
>ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X3 [Solanum tuberosum]
Length = 219
Score = 92.4 bits (228), Expect = 5e-17
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = +1
Query: 88 HHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
HHDSG D SKKHHEKKR HDG+E+LNDVHKHK+S HK S+IDEIG+I+VAG
Sbjct: 169 HHDSGADLSKKHHEKKRKHDGEEELNDVHKHKRSKHKSSKIDEIGAIKVAG 219
>gb|AAR20782.1| At5g12230 [Arabidopsis thaliana] gi|44681434|gb|AAS47657.1|
At5g12230 [Arabidopsis thaliana]
Length = 238
Score = 92.0 bits (227), Expect = 7e-17
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHH+KKR HDGDEDLNDV +HKK+ HK S++DE+G+IRVAG
Sbjct: 188 GHHDSG-DHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG 238
>ref|NP_196784.1| uncharacterized protein [Arabidopsis thaliana]
gi|75171705|sp|Q9FMP0.1|MD19A_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
19a gi|9759390|dbj|BAB10041.1| unnamed protein product
[Arabidopsis thaliana] gi|332004395|gb|AED91778.1|
uncharacterized protein AT5G12230 [Arabidopsis thaliana]
Length = 221
Score = 92.0 bits (227), Expect = 7e-17
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHH+KKR HDGDEDLNDV +HKK+ HK S++DE+G+IRVAG
Sbjct: 171 GHHDSG-DHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG 221
>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Cucumis sativus]
gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like
[Cucumis sativus]
Length = 219
Score = 91.7 bits (226), Expect = 9e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GH DSG DHSKKHHEKKR HDG++D+ND+H+HKKS HK S+I+E+G I+VAG
Sbjct: 168 GHQDSGADHSKKHHEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKVAG 219
>ref|XP_002873556.1| hypothetical protein ARALYDRAFT_488066 [Arabidopsis lyrata subsp.
lyrata] gi|297319393|gb|EFH49815.1| hypothetical protein
ARALYDRAFT_488066 [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
GHHDSG DHSKKHH+KKR HDGDEDLNDV +HKK+ HK S++DE+G+IRVAG
Sbjct: 171 GHHDSG-DHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEMGAIRVAG 221
>ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251197 [Vitis vinifera]
Length = 194
Score = 89.7 bits (221), Expect = 3e-16
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
G HDS DHSKKHHEKKR HDG+ED+ND+ +HKKS HK S+IDE+G+I+VAG
Sbjct: 143 GQHDSAADHSKKHHEKKRKHDGEEDVNDIQRHKKSKHKSSKIDELGAIKVAG 194
>emb|CBI38298.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 89.7 bits (221), Expect = 3e-16
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +1
Query: 85 GHHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRVAG 240
G HDS DHSKKHHEKKR HDG+ED+ND+ +HKKS HK S+IDE+G+I+VAG
Sbjct: 153 GQHDSAADHSKKHHEKKRKHDGEEDVNDIQRHKKSKHKSSKIDELGAIKVAG 204
>ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X4 [Solanum tuberosum]
Length = 218
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Frame = +1
Query: 88 HHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIRV 234
HHDSG D SKKHHEKKR HDG+E+LNDVHKHK+S HK S+IDEIG+I++
Sbjct: 169 HHDSGADLSKKHHEKKRKHDGEEELNDVHKHKRSKHKSSKIDEIGAIKL 217
>ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Solanum tuberosum]
gi|565354889|ref|XP_006344341.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like isoform
X2 [Solanum tuberosum]
Length = 220
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 88 HHDSGGDHSKKHHEKKRNHDGDEDLNDVHKHKKSNHKISEIDEIGSIR 231
HHDSG D SKKHHEKKR HDG+E+LNDVHKHK+S HK S+IDEIG+I+
Sbjct: 169 HHDSGADLSKKHHEKKRKHDGEEELNDVHKHKRSKHKSSKIDEIGAIK 216