BLASTX nr result
ID: Jatropha_contig00042944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00042944
(632 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG70349.1| polyprotein [Barley yellow mosaic virus] 59 8e-07
dbj|BAG70351.1| polyprotein [Barley yellow mosaic virus] 59 1e-06
emb|CAD57009.1| polyprotein [Barley yellow mosaic virus] 59 1e-06
dbj|BAI49485.1| 271-kDa polyprotein [Barley yellow mosaic virus] 59 1e-06
ref|NP_148999.1| polyprotein [Barley yellow mosaic virus] gi|820... 59 1e-06
emb|CAD57005.1| polyprotein [Barley yellow mosaic virus] gi|3458... 58 2e-06
emb|CAD57008.1| polyprotein [Barley yellow mosaic virus] 58 2e-06
emb|CAD57010.1| polyprotein [Barley yellow mosaic virus] 58 2e-06
emb|CAD56471.1| polyprotein 1 [Barley yellow mosaic virus] 58 2e-06
emb|CAD57012.1| polyprotein [Barley yellow mosaic virus] 58 2e-06
emb|CAD56472.1| polyprotein 1 [Barley yellow mosaic virus] 58 2e-06
emb|CAD56474.1| polyprotein 1 [Barley yellow mosaic virus] 58 2e-06
emb|CAD56476.1| polyprotein 1 [Barley yellow mosaic virus] 58 2e-06
emb|CAD57006.1| polyprotein [Barley yellow mosaic virus] 58 2e-06
emb|CAD56477.1| polyprotein 1 [Barley yellow mosaic virus] 58 2e-06
sp|Q04574.1|POL1_BAYMG RecName: Full=Genome polyprotein 1; Conta... 58 2e-06
dbj|BAG70353.1| polyprotein [Barley yellow mosaic virus] 58 2e-06
emb|CAD56475.1| polyprotein 1 [Barley yellow mosaic virus] 57 4e-06
emb|CAD56473.1| polyprotein 1 [Barley yellow mosaic virus] 56 7e-06
sp|Q01206.1|POL1_BAYMJ RecName: Full=Genome polyprotein 1; Conta... 56 7e-06
>dbj|BAG70349.1| polyprotein [Barley yellow mosaic virus]
Length = 2412
Score = 59.3 bits (142), Expect = 8e-07
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK+ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTIEGDEFFRTADP 1261
>dbj|BAG70351.1| polyprotein [Barley yellow mosaic virus]
Length = 2412
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK+ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFFTTEGDEFFRTAEP 1261
>emb|CAD57009.1| polyprotein [Barley yellow mosaic virus]
Length = 312
Score = 58.5 bits (140), Expect = 1e-06
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK+ L +AY+K
Sbjct: 15 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAYEK 74
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 75 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 108
>dbj|BAI49485.1| 271-kDa polyprotein [Barley yellow mosaic virus]
Length = 2412
Score = 58.5 bits (140), Expect = 1e-06
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK+ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>ref|NP_148999.1| polyprotein [Barley yellow mosaic virus]
gi|82007911|sp|Q9YJW3.1|POL1_BAYMY RecName: Full=Genome
polyprotein 1; Contains: RecName: Full=Protein P3;
Contains: RecName: Full=6 kDa protein 1; Short=6K1;
Contains: RecName: Full=Cytoplasmic inclusion protein;
Short=CI; Contains: RecName: Full=6 kDa protein 2;
Short=6K2; Contains: RecName: Full=Viral genome-linked
protein; AltName: Full=VPg; Contains: RecName:
Full=Nuclear inclusion protein A; Short=NI-a; Short=NIa;
AltName: Full=NIa-pro; Contains: RecName: Full=Nuclear
inclusion protein B; Short=NI-b; Short=NIb; AltName:
Full=RNA-directed RNA polymerase; Contains: RecName:
Full=Capsid protein; Short=CP; AltName: Full=Coat protein
gi|4210318|emb|CAA10637.1| polyprotein [Barley yellow
mosaic virus]
Length = 2410
Score = 58.5 bits (140), Expect = 1e-06
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK+ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD57005.1| polyprotein [Barley yellow mosaic virus]
gi|34582197|emb|CAD57007.1| polyprotein [Barley yellow
mosaic virus]
Length = 312
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 15 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 74
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 75 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 108
>emb|CAD57008.1| polyprotein [Barley yellow mosaic virus]
Length = 312
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 15 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWDEKAKERRKKVTDKAEPELRRAYEK 74
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 75 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 108
>emb|CAD57010.1| polyprotein [Barley yellow mosaic virus]
Length = 312
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 15 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 74
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 75 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 108
>emb|CAD56471.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD57012.1| polyprotein [Barley yellow mosaic virus]
Length = 1465
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD56472.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD56474.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD56476.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD57006.1| polyprotein [Barley yellow mosaic virus]
Length = 312
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 15 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 74
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 75 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 108
>emb|CAD56477.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>sp|Q04574.1|POL1_BAYMG RecName: Full=Genome polyprotein 1; Contains: RecName: Full=Protein
P3; Contains: RecName: Full=6 kDa protein 1; Short=6K1;
Contains: RecName: Full=Cytoplasmic inclusion protein;
Short=CI; Contains: RecName: Full=6 kDa protein 2;
Short=6K2; Contains: RecName: Full=Viral genome-linked
protein; AltName: Full=VPg; Contains: RecName:
Full=Nuclear inclusion protein A; Short=NI-a; Short=NIa;
AltName: Full=NIa-pro; Contains: RecName: Full=Nuclear
inclusion protein B; Short=NI-b; Short=NIb; AltName:
Full=RNA-directed RNA polymerase; Contains: RecName:
Full=Coat protein; Short=CP gi|58679|emb|CAA49412.1| C1
(helicase) [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>dbj|BAG70353.1| polyprotein [Barley yellow mosaic virus]
Length = 2412
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V D++ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDRSEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTIEGDEFFRTADP 1261
>emb|CAD56475.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 57.0 bits (136), Expect = 4e-06
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE F+ A + V D+ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDRAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>emb|CAD56473.1| polyprotein 1 [Barley yellow mosaic virus]
Length = 2412
Score = 56.2 bits (134), Expect = 7e-06
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
D+DK L G GNKYRPR DA LM S RE F+ A + V DK L +AY+K
Sbjct: 1168 DNDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261
>sp|Q01206.1|POL1_BAYMJ RecName: Full=Genome polyprotein 1; Contains: RecName: Full=Protein
P3; Contains: RecName: Full=6 kDa protein 1; Short=6K1;
Contains: RecName: Full=Cytoplasmic inclusion protein;
Short=CI; Contains: RecName: Full=6 kDa protein 2;
Short=6K2; Contains: RecName: Full=Viral genome-linked
protein; AltName: Full=VPg; Contains: RecName:
Full=Nuclear inclusion protein A; Short=NI-a; Short=NIa;
AltName: Full=NIa-pro; Contains: RecName: Full=Nuclear
inclusion protein B; Short=NI-b; Short=NIb; AltName:
Full=RNA-directed RNA polymerase; Contains: RecName:
Full=Coat protein; Short=CP gi|221110|dbj|BAA00875.1|
polyprotein [Barley yellow mosaic virus]
Length = 2410
Score = 56.2 bits (134), Expect = 7e-06
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 DDDKFVLXGXGNKYRPRXDAXLM*SXREGDXFEDS*XXAIXKSXNVPDKTSMLLHKAYKK 226
DDDK L G GNKYRPR DA LM S RE + A + V DK+ L +AY+K
Sbjct: 1168 DDDKIGLEGKGNKYRPREDARLMYSTREDATLDAWNEKAKERRKKVTDKSEPELRRAYEK 1227
Query: 227 KPTXNFNEGXXXSAFXK-LCSSFSGNMIFRNPHP 325
+P NF + S + + + G+ FR P
Sbjct: 1228 RPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADP 1261