BLASTX nr result

ID: Jatropha_contig00042912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042912
         (835 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF06007.2| hydroxyproline-rich glycoprotein [Populus trichoc...    77   7e-12
ref|XP_002321880.1| predicted protein [Populus trichocarpa]            76   2e-11
ref|XP_002523666.1| conserved hypothetical protein [Ricinus comm...    64   5e-08

>gb|EEF06007.2| hydroxyproline-rich glycoprotein [Populus trichocarpa]
          Length = 466

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 36/164 (21%)
 Frame = +1

Query: 181 APSKPDTNDSKTESSDRPQQPAGIGHGRGRP----PILPAFXXXXXXXXXXXXATGRGRG 348
           AP KPD ++SKTESS+   QP+G+GHGRG+P    PILPAF              GRGRG
Sbjct: 61  APGKPDLDESKTESSE--SQPSGLGHGRGKPVGTGPILPAFSTFISSVKNSQPGAGRGRG 118

Query: 349 ------------------------NLPSAVESGVGRGKLDKPV--AAPTNQEDEENRHIR 450
                                   NLP ++ SG+G     KPV    P     EENRH+R
Sbjct: 119 TTEPGPSRSTESRPESEPPKKAEANLPPSILSGLGGAGRGKPVKQEVPIEPAKEENRHLR 178

Query: 451 FR--PTVEPGVGRGK-PDKTVAASANQNMKR---IVKSVFVLSK 564
            R  P  +P   + K PD   A  A   M R   + K++ +LS+
Sbjct: 179 ARSQPRSQPRTRQQKTPDGDDAVPATTKMGRQEAVKKAMELLSR 222


>ref|XP_002321880.1| predicted protein [Populus trichocarpa]
          Length = 466

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 57/161 (35%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
 Frame = +1

Query: 181 APSKPDTNDSKTESSDRPQQPAGIGHGRGRP----PILPAFXXXXXXXXXXXXATGRGRG 348
           AP KPD ++SKTESS+   QP+G+GHGRG+P    PILPAF              GRGRG
Sbjct: 61  APGKPDLDESKTESSE--SQPSGLGHGRGKPVGTGPILPAFSTFISSVKNSQPGAGRGRG 118

Query: 349 ------------------------NLPSAVESGVGRGKLDKPV--AAPTNQEDEENRHIR 450
                                   NLP ++ SG+G     KPV    P     EENRH+R
Sbjct: 119 TTEPGPSRSTESRPESEPPKKAEANLPPSILSGLGGAGRGKPVKQEVPIEPAKEENRHLR 178

Query: 451 FR--PTVEPGVGRGKP---DKTVAASANQNMKRIVKSVFVL 558
            R  P  +P   + K    D  V A+     +  VK    L
Sbjct: 179 ARSQPRSQPRTRQQKTPDGDDAVPATTKMGTQEAVKKAMEL 219


>ref|XP_002523666.1| conserved hypothetical protein [Ricinus communis]
           gi|223537066|gb|EEF38701.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 66/203 (32%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
 Frame = +1

Query: 16  MIGNP-IAKRVSNP----STRQAFFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDFT 180
           M GNP IA+R+ NP    S++Q FFL                              FDFT
Sbjct: 1   MRGNPMIARRIPNPISNLSSKQPFFLSSSSFSTSSSGGGGGGRGRGSNPNL-----FDFT 55

Query: 181 --APSKPDTNDSKTESSDRPQQPA-----GIGHGRGRP-PILPAFXXXXXXXXXXXXATG 336
             AP+KP+++D        P  P      G+GHG G   PILPAF             T 
Sbjct: 56  GKAPAKPESSDVAKPHYPPPPPPPPPPRNGVGHGHGGGNPILPAFSSFVSSIGRGRAITD 115

Query: 337 RGRGN------------LPSAVES---GVGRGKLDKPVAAPTNQEDEENRHIRFRPTVEP 471
              G             LPS + S   G GRG+ DKPV  PT Q  EENRHIR R   +P
Sbjct: 116 PEPGPSRQPTESQSDSVLPSTIHSSLSGFGRGEPDKPVV-PTPQVKEENRHIRDRSRAKP 174

Query: 472 GVGRGKPDKTVAASANQNMKRIV 540
                +       S  + +KR V
Sbjct: 175 KTEEAEVRAKPKISREEAVKRAV 197


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