BLASTX nr result

ID: Jatropha_contig00042874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042874
         (314 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002594713.1| hypothetical protein BRAFLDRAFT_224193 [Bran...    58   1e-06

>ref|XP_002594713.1| hypothetical protein BRAFLDRAFT_224193 [Branchiostoma floridae]
           gi|229279949|gb|EEN50724.1| hypothetical protein
           BRAFLDRAFT_224193 [Branchiostoma floridae]
          Length = 65

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = +1

Query: 22  RCHLCRVSSMSGVIYVGCHLCRVSSMSGVIYVRCHLCRVSSMSGVIYVGCHLCR 183
           RC+LCRV S  G  +  C++CR  ++ G  + RC+LCRV S+ G  + GC LCR
Sbjct: 10  RCYLCRVCSAFGGWHYRCNICRFRNVFGGCHYRCNLCRVCSIFGGCHYGCKLCR 63



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = +1

Query: 46  SMSGVIYVGCHLCRVSSMSGVIYVRCHLCRVSSMSGVIYVGCHLCRVSSMSGVIYVGCHL 225
           S+ G  +  C+LCRV S  G  + RC++CR  ++ G  +  C+LCRV S+ G  + GC L
Sbjct: 2   SVFGGCHYRCYLCRVCSAFGGWHYRCNICRFRNVFGGCHYRCNLCRVCSIFGGCHYGCKL 61

Query: 226 CR 231
           CR
Sbjct: 62  CR 63


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