BLASTX nr result

ID: Jatropha_contig00042872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042872
         (307 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002594713.1| hypothetical protein BRAFLDRAFT_224193 [Bran...    56   4e-06
gb|ESP03746.1| hypothetical protein LOTGIDRAFT_136858 [Lottia gi...    55   9e-06

>ref|XP_002594713.1| hypothetical protein BRAFLDRAFT_224193 [Branchiostoma floridae]
           gi|229279949|gb|EEN50724.1| hypothetical protein
           BRAFLDRAFT_224193 [Branchiostoma floridae]
          Length = 65

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = +1

Query: 43  SMSGVIYVGCHLCRVSSMSGVIYVGCHLCRVSSMSGVIYVGCHLCRVSSMSGVIYVGCHL 222
           S+ G  +  C+LCRV S  G  +  C++CR  ++ G  +  C+LCRV S+ G  + GC L
Sbjct: 2   SVFGGCHYRCYLCRVCSAFGGWHYRCNICRFRNVFGGCHYRCNLCRVCSIFGGCHYGCKL 61

Query: 223 CRA 231
           CRA
Sbjct: 62  CRA 64


>gb|ESP03746.1| hypothetical protein LOTGIDRAFT_136858 [Lottia gigantea]
          Length = 352

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 34/72 (47%), Positives = 34/72 (47%)
 Frame = -3

Query: 245 PDIDDARHR*HPT*MTPDIDDTRHR*HPT*MTPDIDDTRHR*HPT*MTPDIDDTRHR*HP 66
           PD    RH  H T  TPD    RH  H T  TPD   TRH  H T   PD   TRH  H 
Sbjct: 86  PDTTYTRHFIHQTLHTPDTTYARHFIHQTLHTPDTTYTRHFIHQTLHIPDTSYTRHFIHQ 145

Query: 65  T*MTPDIDDTRH 30
           T  TPD   TRH
Sbjct: 146 TLHTPDTTYTRH 157


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