BLASTX nr result

ID: Jatropha_contig00042853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042853
         (943 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase...    58   4e-10
gb|ACE95896.1| GloSensor-10F protein [Cloning vector pGloSensor-...    61   7e-07

>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second
           Catalytic Conformation gi|400977535|pdb|4G37|B Chain B,
           Structure Of Cross-Linked Firefly Luciferase In Second
           Catalytic Conformation
          Length = 555

 Score = 57.8 bits (138), Expect(2) = 4e-10
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
 Frame = +1

Query: 292 VSKPPGTFHPVLDGTPGDSLPTPMKIGALLPVTVACTKLIFEVDFPYPKYFKMKVQRLGC 471
           + K P  F+P+ DGT G+ L   MK  AL+P T+A T    EV+  Y +YF+M V+    
Sbjct: 12  IKKGPAPFYPLEDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEA 71

Query: 472 LQREG-----*ILFASRSML*I---LSGNLSGGVGYGIYRSCRRGG*RNVHSS*IAHKMG 627
           ++R G      I+ +S + L     + G L  GV       C        +   + + M 
Sbjct: 72  MKRYGLNTNHRIVVSSENSLQFFMPVLGALFIGVAVAPANDC-------YNERELLNSMN 124

Query: 628 ISRPFEWFDSKTDMQKL*TCNLELSIVHK 714
           IS+P   F SK  +QK+     +L I+ K
Sbjct: 125 ISQPTVVFVSKKGLQKILNVQKKLPIIQK 153



 Score = 33.9 bits (76), Expect(2) = 4e-10
 Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 719 IM*SKRDYQGFHSR-NILMSHLPPGF 793
           IM SK DYQGF S    + SHLPPGF
Sbjct: 156 IMDSKTDYQGFQSMYTFVTSHLPPGF 181


>gb|ACE95896.1| GloSensor-10F protein [Cloning vector pGloSensor-10F]
          Length = 547

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
 Frame = +1

Query: 265 KAPSRERPPVSKPPGTFHPVLDGTPGDSLPTPMKIGALLPVTVACTKLIFEVDFPYPKYF 444
           K  SR    + K P  F+P+ DGT G+ L   MK  AL+P T+A T    EVD  Y +YF
Sbjct: 311 KKASRSAKNIKKGPAPFYPLEDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVDITYAEYF 370

Query: 445 KMKVQRLGCLQREG-----*ILFASRSML*ILSGNLSGGVGYGIYRSCRRGG*RNVHSS* 609
           +M V+    ++R G      I+  S + L      L G +  G+  +         +   
Sbjct: 371 EMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVL-GALFIGVAVAPAND---IYNERE 426

Query: 610 IAHKMGISRPFEWFDSKTDMQKL*TCNLELSIVHK 714
           + + MGIS+P   F SK  +QK+     +L I+ K
Sbjct: 427 LLNSMGISQPTVVFVSKKGLQKILNVQKKLPIIQK 461


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