BLASTX nr result

ID: Jatropha_contig00042821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042821
         (770 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_007053129.1| conserved hypothetical protein [Bifidobacter...    70   7e-10
ref|WP_001029541.1| hypothetical protein [Bacteria] gi|227350652...    49   3e-07
ref|YP_006504677.1| hypothetical protein LPO_0642 [Legionella pn...    58   4e-06

>ref|WP_007053129.1| conserved hypothetical protein [Bifidobacterium longum]
           gi|239516221|gb|EEQ56088.1| hypothetical protein
           BLIG_02218 [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 94

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = -3

Query: 291 LRPYSPGGRLKV*SPEATP-QGHNLQVDIVAAWPTRVSNPVCSPCFRTYSSVFVQGAALA 115
           +RPYSPGG L   +P   P  G ++Q     AW TRVSNPV SP FR+ +SV  Q  A A
Sbjct: 1   MRPYSPGGMLNALAPTRNPWNGPHIQHPPFTAWTTRVSNPVRSPRFRSSASVTAQRPAFA 60

Query: 114 SGITPDLHASHRHT 73
            G+ PD++  HR+T
Sbjct: 61  IGVLPDIYTFHRYT 74


>ref|WP_001029541.1| hypothetical protein [Bacteria] gi|227350652|gb|EEJ40943.1|
           hypothetical protein HMPREF0549_0610 [Lactobacillus
           vaginalis ATCC 49540] gi|330861642|emb|CBX71821.1|
           hypothetical protein YEW_IW38370 [Yersinia
           enterocolitica W22703]
          Length = 47

 Score = 49.3 bits (116), Expect(2) = 3e-07
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +2

Query: 116 AKAAPWTKTEL*VRKQGEHTGLDTLVGHA 202
           AKAAPWTKT+  VRK+GE TGLDTLV HA
Sbjct: 2   AKAAPWTKTDAQVRKRGEQTGLDTLVVHA 30



 Score = 32.3 bits (72), Expect(2) = 3e-07
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1

Query: 205 DDVDLEVVPLRRGFR 249
           +DVDLEVVPLRRGFR
Sbjct: 32  NDVDLEVVPLRRGFR 46


>ref|YP_006504677.1| hypothetical protein LPO_0642 [Legionella pneumophila subsp.
           pneumophila] gi|397665344|ref|YP_006506882.1|
           hypothetical protein LPO_3038 [Legionella pneumophila
           subsp. pneumophila] gi|397666245|ref|YP_006507782.1|
           hypothetical protein LPV_0677 [Legionella pneumophila
           subsp. pneumophila] gi|504653975|ref|WP_014841077.1|
           hypothetical protein [Legionella pneumophila]
           gi|395126550|emb|CCD04733.1| protein of unknown function
           [Legionella pneumophila subsp. pneumophila]
           gi|395128755|emb|CCD06973.1| protein of unknown function
           [Legionella pneumophila subsp. pneumophila]
           gi|395129656|emb|CCD07889.1| protein of unknown function
           [Legionella pneumophila subsp. pneumophila]
          Length = 68

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = -3

Query: 201 AWPTRVSNPVCSPCFRTYSSVFVQGAALASGITPDLHASHRHTCKCTPL 55
           AW TRVSNPVCSP FR   SV  Q AA A+G+  DL+A HR+T   T L
Sbjct: 6   AWTTRVSNPVCSPRFRASVSVLGQVAAFATGVPSDLYAFHRYTGNSTTL 54


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