BLASTX nr result

ID: Jatropha_contig00042636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042636
         (551 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF01806.2| DNA-binding protein GT-1 [Populus trichocarpa]          85   9e-15
ref|XP_002315635.1| predicted protein [Populus trichocarpa]            85   9e-15
ref|XP_002312646.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002514968.1| transcription factor, putative [Ricinus comm...    78   2e-12
ref|XP_004159556.1| PREDICTED: trihelix transcription factor GT-...    56   5e-06
ref|XP_004142945.1| PREDICTED: LOW QUALITY PROTEIN: trihelix tra...    56   5e-06

>gb|EEF01806.2| DNA-binding protein GT-1 [Populus trichocarpa]
          Length = 384

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 45/79 (56%), Positives = 51/79 (64%)
 Frame = +1

Query: 295 MYLSDKPRPIDFYKEEVAPANRDNMIIEVVSTNGDXXXXXXXXXXXXXXXXXXXXXXXXX 474
           MY S+KPRP+DFYKEEV P++RDNMIIEVVS+NGD                         
Sbjct: 1   MYSSEKPRPLDFYKEEVTPSSRDNMIIEVVSSNGD----------LPPHHLPTTTNTNPH 50

Query: 475 XMILGDSSGEDNHEVKAPK 531
            MILGDSSG+DNHEVKAPK
Sbjct: 51  QMILGDSSGDDNHEVKAPK 69


>ref|XP_002315635.1| predicted protein [Populus trichocarpa]
          Length = 384

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 45/79 (56%), Positives = 51/79 (64%)
 Frame = +1

Query: 295 MYLSDKPRPIDFYKEEVAPANRDNMIIEVVSTNGDXXXXXXXXXXXXXXXXXXXXXXXXX 474
           MY S+KPRP+DFYKEEV P++RDNMIIEVVS+NGD                         
Sbjct: 1   MYSSEKPRPLDFYKEEVTPSSRDNMIIEVVSSNGD----------LPPHHLPTTTNTNPH 50

Query: 475 XMILGDSSGEDNHEVKAPK 531
            MILGDSSG+DNHEVKAPK
Sbjct: 51  QMILGDSSGDDNHEVKAPK 69


>ref|XP_002312646.1| predicted protein [Populus trichocarpa] gi|222852466|gb|EEE90013.1|
           DNA-binding protein GT-1 [Populus trichocarpa]
          Length = 385

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/80 (56%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 295 MYLSDKPRPIDFYKEEVAP-ANRDNMIIEVVSTNGDXXXXXXXXXXXXXXXXXXXXXXXX 471
           MYLS+KPRP+DFYKEEV P ++RDNMIIEVVS+NGD                        
Sbjct: 1   MYLSEKPRPLDFYKEEVGPSSSRDNMIIEVVSSNGD---------LPPLHLHPITAATNP 51

Query: 472 XXMILGDSSGEDNHEVKAPK 531
             MILG+SSG+DNHEVKAPK
Sbjct: 52  HQMILGESSGDDNHEVKAPK 71


>ref|XP_002514968.1| transcription factor, putative [Ricinus communis]
           gi|223546019|gb|EEF47522.1| transcription factor,
           putative [Ricinus communis]
          Length = 398

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/82 (56%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = +1

Query: 295 MYLSDKPRPIDFYKEEVAP-ANRDNMIIEVVSTNGD--XXXXXXXXXXXXXXXXXXXXXX 465
           MYLS+K RPIDFYKEEVAP A R+NMIIEVVSTNG+                        
Sbjct: 1   MYLSEKTRPIDFYKEEVAPTATRENMIIEVVSTNGELPPHQQHHHIHNPHNPQPQQQQQQ 60

Query: 466 XXXXMILGDSSGEDNHEVKAPK 531
               MILG+SSGED HEVKAPK
Sbjct: 61  QQQQMILGESSGEDTHEVKAPK 82


>ref|XP_004159556.1| PREDICTED: trihelix transcription factor GT-1-like [Cucumis
           sativus]
          Length = 382

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 41/79 (51%), Positives = 44/79 (55%)
 Frame = +1

Query: 295 MYLSDKPRPIDFYKEEVAPANRDNMIIEVVSTNGDXXXXXXXXXXXXXXXXXXXXXXXXX 474
           MYLSDKPRPID YKEE    +RD M+IEV S NGD                         
Sbjct: 1   MYLSDKPRPIDIYKEE---GSRD-MLIEVAS-NGD------HHIQPHQPQPQPQQTHQQH 49

Query: 475 XMILGDSSGEDNHEVKAPK 531
            M+LGDSSGED HEVKAPK
Sbjct: 50  QMMLGDSSGED-HEVKAPK 67


>ref|XP_004142945.1| PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor
           GT-1-like [Cucumis sativus]
          Length = 387

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 41/79 (51%), Positives = 44/79 (55%)
 Frame = +1

Query: 295 MYLSDKPRPIDFYKEEVAPANRDNMIIEVVSTNGDXXXXXXXXXXXXXXXXXXXXXXXXX 474
           MYLSDKPRPID YKEE    +RD M+IEV S NGD                         
Sbjct: 1   MYLSDKPRPIDIYKEE---GSRD-MLIEVAS-NGD------HHIQPHQPQPQPQQTHQQH 49

Query: 475 XMILGDSSGEDNHEVKAPK 531
            M+LGDSSGED HEVKAPK
Sbjct: 50  QMMLGDSSGED-HEVKAPK 67


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