BLASTX nr result

ID: Jatropha_contig00042619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00042619
         (482 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515195.1| peptide chain release factor, putative [Rici...    97   3e-18
gb|EOX95428.1| Peptide chain release factor, putative [Theobroma...    79   4e-13
gb|EEE99260.2| hypothetical protein POPTR_0014s10930g [Populus t...    70   4e-10
gb|ESR57842.1| hypothetical protein CICLE_v10020151mg [Citrus cl...    64   1e-08
emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]    59   5e-07
gb|ESQ39346.1| hypothetical protein EUTSA_v10001468mg [Eutrema s...    59   8e-07
ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...    56   4e-06
ref|XP_006294308.1| hypothetical protein CARUB_v10023316mg [Caps...    55   7e-06
ref|XP_006294307.1| hypothetical protein CARUB_v10023316mg [Caps...    55   7e-06

>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
           gi|223545675|gb|EEF47179.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 422

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
 Frame = +2

Query: 227 MRIDRGLKWSVNVVRSIKQLQSTPAVS-HTNPFYRKSSFT-SAVANAFLLLSRSYSTELQ 400
           MRI+RGL W+      IKQLQ + A++ H +   R+SSF  SA+ANA  L SR+YSTELQ
Sbjct: 1   MRINRGLNWA------IKQLQFSSAITWHQSHSIRESSFLGSAIANASHLFSRAYSTELQ 54

Query: 401 SQLSPDLIRIMDQRLSAIEHRSAYLEN 481
           S LSPDLIRIM+QRLSAIEHRSAYLEN
Sbjct: 55  SHLSPDLIRIMEQRLSAIEHRSAYLEN 81


>gb|EOX95428.1| Peptide chain release factor, putative [Theobroma cacao]
          Length = 422

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 45/84 (53%), Positives = 58/84 (69%)
 Frame = +2

Query: 230 RIDRGLKWSVNVVRSIKQLQSTPAVSHTNPFYRKSSFTSAVANAFLLLSRSYSTELQSQL 409
           R++R   W +N   S +QLQ   A S+ NP+ ++S     + N+ L  SR YSTELQ QL
Sbjct: 3   RLNRTFIWWIN---SSRQLQL--AKSNANPYNQRSFLLPEIVNSTLSFSRYYSTELQPQL 57

Query: 410 SPDLIRIMDQRLSAIEHRSAYLEN 481
           S DL++IM+QRLSAIEHRSAYLEN
Sbjct: 58  STDLLKIMEQRLSAIEHRSAYLEN 81


>gb|EEE99260.2| hypothetical protein POPTR_0014s10930g [Populus trichocarpa]
          Length = 424

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 44/80 (55%), Positives = 52/80 (65%)
 Frame = +2

Query: 242 GLKWSVNVVRSIKQLQSTPAVSHTNPFYRKSSFTSAVANAFLLLSRSYSTELQSQLSPDL 421
           G KWS N+++  K +QS    +H N   R S   S +   F   SR YSTE Q QLSP+L
Sbjct: 11  GFKWSFNLLKQ-KLIQSGRNTNHWN---RTSFLQSPIPKHF---SRYYSTESQLQLSPNL 63

Query: 422 IRIMDQRLSAIEHRSAYLEN 481
           IRIM+QRLSAIEHRSA LEN
Sbjct: 64  IRIMEQRLSAIEHRSACLEN 83


>gb|ESR57842.1| hypothetical protein CICLE_v10020151mg [Citrus clementina]
          Length = 445

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
 Frame = +2

Query: 182 STDTLDIHRKQERREMRIDRGLKWSVNV-VRSIKQLQSTPAVSHTNPFYRKSSFTS-AVA 355
           S +T +  RK + RE  + R + W++ + + +++QL+S+ ++SH NP   +  F   A A
Sbjct: 7   SFNTANKRRKIKNREKEM-RKVNWAIALHLGALRQLESSSSISHRNPLLHQRWFVQRAAA 65

Query: 356 NAFLLLSRSYSTELQSQLSPDLIRIMDQRLSAIEHRSAYLEN 481
              L   RSYSTE+   LS DLI+IM+QR+ AIE RSA LEN
Sbjct: 66  TPSLSNFRSYSTEM---LSNDLIKIMEQRVLAIERRSACLEN 104


>emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/69 (52%), Positives = 44/69 (63%)
 Frame = +2

Query: 275  IKQLQSTPAVSHTNPFYRKSSFTSAVANAFLLLSRSYSTELQSQLSPDLIRIMDQRLSAI 454
            +KQ+  T  VS+T    +     S +A       R YSTELQ QLS DLI IM+QRLSAI
Sbjct: 1160 LKQI-GTLYVSYTTYQIQNGFLHSTMAKTPFSFIRPYSTELQPQLSTDLIGIMEQRLSAI 1218

Query: 455  EHRSAYLEN 481
            EHRSAYL++
Sbjct: 1219 EHRSAYLQD 1227


>gb|ESQ39346.1| hypothetical protein EUTSA_v10001468mg [Eutrema salsugineum]
          Length = 410

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 26/36 (72%), Positives = 34/36 (94%)
 Frame = +2

Query: 371 LSRSYSTELQSQLSPDLIRIMDQRLSAIEHRSAYLE 478
           ++R YSTE++ QLSPDLI+IMDQRLSAIEHR+A+L+
Sbjct: 34  MARMYSTEMEPQLSPDLIKIMDQRLSAIEHRNAFLQ 69


>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +2

Query: 377 RSYSTELQSQLSPDLIRIMDQRLSAIEHRSAYLEN 481
           R YSTELQ QLS DLI IM+QRLSAIEHRSAYL++
Sbjct: 10  RPYSTELQPQLSTDLIGIMEQRLSAIEHRSAYLQD 44


>ref|XP_006294308.1| hypothetical protein CARUB_v10023316mg [Capsella rubella]
           gi|482563016|gb|EOA27206.1| hypothetical protein
           CARUB_v10023316mg [Capsella rubella]
          Length = 412

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = +2

Query: 377 RSYSTELQSQLSPDLIRIMDQRLSAIEHRSAYLE 478
           R Y+TE++ QLSPDLIRIMDQRLSAIEHR+A L+
Sbjct: 37  RLYTTEMEPQLSPDLIRIMDQRLSAIEHRNALLQ 70


>ref|XP_006294307.1| hypothetical protein CARUB_v10023316mg [Capsella rubella]
           gi|482563015|gb|EOA27205.1| hypothetical protein
           CARUB_v10023316mg [Capsella rubella]
          Length = 294

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = +2

Query: 377 RSYSTELQSQLSPDLIRIMDQRLSAIEHRSAYLE 478
           R Y+TE++ QLSPDLIRIMDQRLSAIEHR+A L+
Sbjct: 37  RLYTTEMEPQLSPDLIRIMDQRLSAIEHRNALLQ 70


Top